TCONS_00044186 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044186
Unique NameTCONS_00044186
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length173

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044186 ID=TCONS_00044186|Name=TCONS_00044186|organism=Clytia hemisphaerica|type=transcript|length=173bp
NNCGTACCAAATCCTGTGTCGTATTTATATCTAAAAACATcttataaaat
atgaaaaatatattaatcCCTAGTTCTATTTCTAACTATAATTTTATTCC
TATTCCTAGTCCTAATCCTATTCGTAGCCCTAAGAGtctaaaatcctcaa
aaaacgtttaaaacaTAATACAG
Run BLAST on NCBI

transcript from alignment at sc0005128:1..173

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044186 ID=TCONS_00044186|Name=TCONS_00044186|organism=Clytia hemisphaerica|type=transcript|length=173bp|location=Sequence derived from alignment at sc0005128:1..173 (Clytia hemisphaerica)
CTGTATTAtgttttaaacgttttttgaggattttagaCTCTTAGGGCTAC
GAATAGGATTAGGACTAGGAATAGGAATAAAATTATAGTTAGAAATAGAA
CTAGGgattaatatatttttcatattttataagATGTTTTTAGATATAAA
TACGACACAGGATTTGGTACGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027832XLOC_027832Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044186-exon-sc0005128-1491911889:1..173TCONS_00044186-exon-sc0005128-1491911889:1..173Clytia hemisphaericaexon
TCONS_00044186-exon-sc0005128-1510915933:1..173TCONS_00044186-exon-sc0005128-1510915933:1..173Clytia hemisphaericaexon
TCONS_00044186-exon-sc0005128-1575043694:1..173TCONS_00044186-exon-sc0005128-1575043694:1..173Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005128supercontigsc0005128:1..173 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044186 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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