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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044179 ID=TCONS_00044179|Name=TCONS_00044179|organism=Clytia hemisphaerica|type=transcript|length=962bp
tATACAACACAACTGATACAAAAAAGACCATATTACTGCCGTCTTCTACG
TTTGTCTTATTATGCTTTCATATTTCCAACACATTACTCAAGAAAACTAG
TATTCGTTTAGGGAAGAAAAATTCGTGCCAGCCCTTGGGTTAACGTGGTC
ATACTTTGTCACTACGAGACTGATTCTCGCAAGAACCAAACATTCTTTAT
CTACTATTGGAATTAATGCTaatAACGAAATGTTAGCTGAGGATTCTAAC
ATAAGAACATGCCGAATTGCTTTTTCGCCACACCTTTCAAATAGAAGATG
TTTTTTCCTTGTCTTGAAGCAAGGGCTCAAAGGTTTTAATTTCGAAGACa
agcaaaatgaaaactttGAGTTACTAGAAAGTTGTTAAACGAGTTTAgtt
atattattttgatgacatTGTACACAATCACTTTGTAAATAGCCTCAAGG
TTACATACGCTTAacctcaaatatttttttttaattatcgaAATTATCTT
TCTAGTTTTGGTATTTGTCACCATTAAATTTGATTGATTTTCACCAGGTT
TTTAACTTTTATGGTTCAAGTTTAGCttgttatgttttattttgtaaCAC
TCCTTGGACGATTTTTTGTGGAGTACAGAGTAAAATTTAGCTGATCTGGT
AAATTGAAGGCCCGCATCTTCTATAAGTCAATCCATTATGGTTTGGTGGT
CTTGGATATATCTTTAATATCTAATAACTATTGGACCCATCGGCCTCTGT
TGNTATGGTTTGGTGGTCTTGGATATATCTTTAATATCTAATAACTATTG
GACCCATCGGCCTCTGTTGCTTCCTTGGATGACGGGATGGAATGTAATTA
TTTATTGTCGTTTAGTACCGCCATCATGATATTTTGGTTTTGAGATCATA
TTTCATACaactatttaaaaatttcttcctataAATCGTTCTTGAAGAAA
AGACAAGTCCTA Run BLAST on NCBI transcript from alignment at sc0005119:3237..4656+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044179 ID=TCONS_00044179|Name=TCONS_00044179|organism=Clytia hemisphaerica|type=transcript|length=1420bp|location=Sequence derived from alignment at sc0005119:3237..4656+ (Clytia hemisphaerica)
tATACAACACAACTGATACAAAAAAGACCATATTACTGCCGTCTTCTACG
TTTGTCTTATTATGCTTTCATATTTCCAACACATTACTCAAGAAAACTAG
TATTCGTTTAGGGAAGAAAAATTCGTGCCAGCCCTTGGGTTAACGTGGTC
ATACTTTGTCACTACGAGACTGATTCTCGCAAGAACCAAACATTCTTTAT
CTACTATTGGAATTAATGCTGTAAGTCAACACTACATTATTCGTAACTGG
CTCTGTTATTTTTGAACTGAACAGAACACGACAGGGGCGGTGATTTAACT
TGACAATCGCTCCTTAAAAGAACTGAAAACTTTTCTTTGATAATGATTCC
TTCTGTCCATTGTGAGGAGGGTGCCGCTCTTTGCCTGGGATCACTACTGT
ATTTTAAACACCAGAATACTGTATTTGATATCACGTCTACCAGCATCTAC
ATTATAATAAGTTGTCACAAAAAATGCTTGCGATGACTTGACTTTTCACA
AGTTTTCATGTAACAGGTCCATCATACttagcattttttacaaaagattc
tTCTGAATATCTCGACTTACAGCATCAATTATAAAAAAGGCTTTGAGGTT
TTGCTCAAGATCATAGAAGGTATCTGTAGCTTCAATATCTCAAACCACCC
TTtaacaatttaattttctcttttttagaatAACGAAATGTTAGCTGAGG
ATTCTAACATAAGAACATGCCGAATTGCTTTTTCGCCACACCTTTCAAAT
AGAAGATGTTTTTTCCTTGTCTTGAAGCAAGGGCTCAAAGGTTTTAATTT
CGAAGACaagcaaaatgaaaactttGAGTTACTAGAAAGTTGTTAAACGA
GTTTAgttatattattttgatgacatTGTACACAATCACTTTGTAAATAG
CCTCAAGGTTACATACGCTTAacctcaaatatttttttttaattatcgaA
ATTATCTTTCTAGTTTTGGTATTTGTCACCATTAAATTTGATTGATTTTC
ACCAGGTTTTTAACTTTTATGGTTCAAGTTTAGCttgttatgttttattt
tgtaaCACTCCTTGGACGATTTTTTGTGGAGTACAGAGTAAAATTTAGCT
GATCTGGTAAATTGAAGGCCCGCATCTTCTATAAGTCAATCCATTATGGT
TTGGTGGTCTTGGATATATCTTTAATATCTAATAACTATTGGACCCATCG
GCCTCTGTTGNTATGGTTTGGTGGTCTTGGATATATCTTTAATATCTAAT
AACTATTGGACCCATCGGCCTCTGTTGCTTCCTTGGATGACGGGATGGAA
TGTAATTATTTATTGTCGTTTAGTACCGCCATCATGATATTTTGGTTTTG
AGATCATATTTCATACaactatttaaaaatttcttcctataAATCGTTCT
TGAAGAAAAGACAAGTCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044179-exon-sc0005119-1491911889:3237..3456 | TCONS_00044179-exon-sc0005119-1491911889:3237..3456 | Clytia hemisphaerica | exon |
| TCONS_00044179-exon-sc0005119-1510915933:3237..3456 | TCONS_00044179-exon-sc0005119-1510915933:3237..3456 | Clytia hemisphaerica | exon |
| TCONS_00044179-exon-sc0005119-1575043694:3237..3456 | TCONS_00044179-exon-sc0005119-1575043694:3237..3456 | Clytia hemisphaerica | exon |
| TCONS_00044179-exon-sc0005119-1491911889:3915..4656 | TCONS_00044179-exon-sc0005119-1491911889:3915..4656 | Clytia hemisphaerica | exon |
| TCONS_00044179-exon-sc0005119-1510915933:3915..4656 | TCONS_00044179-exon-sc0005119-1510915933:3915..4656 | Clytia hemisphaerica | exon |
| TCONS_00044179-exon-sc0005119-1575043694:3915..4656 | TCONS_00044179-exon-sc0005119-1575043694:3915..4656 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005119 | supercontig | sc0005119:3237..4656 + |
Blast
The following BLAST results are available for this feature:
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