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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044152 ID=TCONS_00044152|Name=TCONS_00044152|organism=Clytia hemisphaerica|type=transcript|length=1443bp
CTGATATAAAACAAGTCAGCGTTGGAAGAAAAGGTCTCAATACTTTGCTC
AGAGCATGTAGTGATCGTGGTTTGGATGATTTGGCACGGTAAGTCTTTTC
ACCCTTTATTTGTTCTAAATCTTAAAAGTAAGATAATTTGCCCAGTCATG
ATACAACTTAAGGGTAGCAGGCATTTCAATAGGTTACATAGGCTGTTATC
GAAGATTTATATTCAGACCAGTAATCTGTAGAACCCTGTAGTAATCTGCG
TAAATGtatttttcatagttttttttttactatatgaatgtagaaatttt
attttgatttttgtatcaAGGGAGCTGCAAGAGACATCAAGCTCGAATGA
GGGTGGTACCGTCACTGTCCATGAACCATGCAGAAAGAAAATAATCGACA
AGCGTACTATCCCATGTACAGTAGACAATCGACCTACGAAGCGTTTAAGA
TCTTCAAATGCTGCCGAGCTCTTATTTGAATGGAAGAAAAACTGCTTTCT
TTGCAACAAAAAAGCTAATCGTAAATACTCAACAGTTGTAGCCGTGGAAA
CCCTACCTATCAAGAAACACTTGCTAGAATGTTCACGAGAGAGGAACGAT
GAATGGGGAGACAAGGTAAAAGATCGTTTAAACTCTTGTATTGACTTAGT
CGCTGCAGAGGCTGTATACCACATCGTTAGTATGAACCGCTTTCGATTGA
CCAAGTCCACCAAAGACAAGCCGTTAGGTAGACCAATCGACACATCGATG
ATGGAAAATTTCCAGAATGTATGTCAATGGCTAGATGAAGGTGATGGCGA
TTTGCATACAATTACTGAAATATATGATAAGATGATCGAGCTGAGTGGAG
GAACTGAATGTTACAGTCGAAGATATTTAAAAACGAAGCTTATGGAAAAC
TACAAGGAACATATATACTTCTTTCAGAGCGAGGGGAGAAGCGACATCAT
CGGCTTTAGACATATGAGTAAATTCTTTATGGAAGAGTTTATGAGGATGA
AGGAGCGGACTCCAGTTGACTTGATAACAGCTGcactaaaaattgtaaaa
agtgATATAAGAGAAATGCCAATAGACAAAACATTTTACCCATCGTTGTT
TGAAATGAGGAACTTGGACTATCAAGCTGAATGGGTACCCGAAAGCTTAC
AGATATTTCTTTCACAATTATTTTCTTCAAAGCTAAAACAAATTTGCATA
GACCAAACCATCACACAAGCATCGATACCAAGGTCATCTATCGCACCGAT
ACCTTTTGGGATTGGCGTAGACCTTGATAAATCTTTCGCCACGAGATGGT
TCGTTGATCATCTCGCAAAATTTGGCTTTTCTGTGTCATCTGGAGAAGTT
AAGCTATTCAAGGAATCTGCCATAGCATCTTTTACCAAGGACAACATTGT
GCCTGAGGATACAGCATCCGATCAACAACCACCTGAATATCCT Run BLAST on NCBI protein sequence of TCONS_00044152-protein >TCONS_00044152-protein ID=TCONS_00044152-protein|Name=TCONS_00044152-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
MNRFRLTKSTKDKPLGRPIDTSMMENFQNVCQWLDEGDGDLHTITEIYDK
MIELSGGTECYSRRYLKTKLMENYKEHIYFFQSEGRSDIIGFRHMSKFFM
EEFMRMKERTPVDLITAALKIVKSDIREMPIDKTFYPSLFEMRNLDYQAE
WVPESLQIFLSQLFSSKLKQICIDQTITQASIPRSSIAPIPFGIGVDLDK
SFATRWFVDHLAKFGFSVSSGEVKLFKESAIASFTKDNIVPEDTASDQQP
PEYP Run BLAST on NCBI transcript from alignment at sc0005071:37..1479 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044152 ID=TCONS_00044152|Name=TCONS_00044152|organism=Clytia hemisphaerica|type=transcript|length=1443bp|location=Sequence derived from alignment at sc0005071:37..1479 (Clytia hemisphaerica)
AGGATATTCAGGTGGTTGTTGATCGGATGCTGTATCCTCAGGCACAATGT
TGTCCTTGGTAAAAGATGCTATGGCAGATTCCTTGAATAGCTTAACTTCT
CCAGATGACACAGAAAAGCCAAATTTTGCGAGATGATCAACGAACCATCT
CGTGGCGAAAGATTTATCAAGGTCTACGCCAATCCCAAAAGGTATCGGTG
CGATAGATGACCTTGGTATCGATGCTTGTGTGATGGTTTGGTCTATGCAA
ATTTGTTTTAGCTTTGAAGAAAATAATTGTGAAAGAAATATCTGTAAGCT
TTCGGGTACCCATTCAGCTTGATAGTCCAAGTTCCTCATTTCAAACAACG
ATGGGTAAAATGTTTTGTCTATTGGCATTTCTCTTATATcactttttaca
atttttagtgCAGCTGTTATCAAGTCAACTGGAGTCCGCTCCTTCATCCT
CATAAACTCTTCCATAAAGAATTTACTCATATGTCTAAAGCCGATGATGT
CGCTTCTCCCCTCGCTCTGAAAGAAGTATATATGTTCCTTGTAGTTTTCC
ATAAGCTTCGTTTTTAAATATCTTCGACTGTAACATTCAGTTCCTCCACT
CAGCTCGATCATCTTATCATATATTTCAGTAATTGTATGCAAATCGCCAT
CACCTTCATCTAGCCATTGACATACATTCTGGAAATTTTCCATCATCGAT
GTGTCGATTGGTCTACCTAACGGCTTGTCTTTGGTGGACTTGGTCAATCG
AAAGCGGTTCATACTAACGATGTGGTATACAGCCTCTGCAGCGACTAAGT
CAATACAAGAGTTTAAACGATCTTTTACCTTGTCTCCCCATTCATCGTTC
CTCTCTCGTGAACATTCTAGCAAGTGTTTCTTGATAGGTAGGGTTTCCAC
GGCTACAACTGTTGAGTATTTACGATTAGCTTTTTTGTTGCAAAGAAAGC
AGTTTTTCTTCCATTCAAATAAGAGCTCGGCAGCATTTGAAGATCTTAAA
CGCTTCGTAGGTCGATTGTCTACTGTACATGGGATAGTACGCTTGTCGAT
TATTTTCTTTCTGCATGGTTCATGGACAGTGACGGTACCACCCTCATTCG
AGCTTGATGTCTCTTGCAGCTCCCTtgatacaaaaatcaaaataaaattt
ctacattcatatagtaaaaaaaaaactatgaaaaataCATTTACGCAGAT
TACTACAGGGTTCTACAGATTACTGGTCTGAATATAAATCTTCGATAACA
GCCTATGTAACCTATTGAAATGCCTGCTACCCTTAAGTTGTATCATGACT
GGGCAAATTATCTTACTTTTAAGATTTAGAACAAATAAAGGGTGAAAAGA
CTTACCGTGCCAAATCATCCAAACCACGATCACTACATGCTCTGAGCAAA
GTATTGAGACCTTTTCTTCCAACGCTGACTTGTTTTATATCAG Coding sequence (CDS) from alignment at sc0005071:37..1479 >TCONS_00044152 ID=TCONS_00044152|Name=TCONS_00044152|organism=Clytia hemisphaerica|type=CDS|length=762bp|location=Sequence derived from alignment at sc0005071:37..1479 (Clytia hemisphaerica)
AGGATATTCAGGTGGTTGTTGATCGGATGCTGTATCCTCAGGCACAATGT
TGTCCTTGGTAAAAGATGCTATGGCAGATTCCTTGAATAGCTTAACTTCT
CCAGATGACACAGAAAAGCCAAATTTTGCGAGATGATCAACGAACCATCT
CGTGGCGAAAGATTTATCAAGGTCTACGCCAATCCCAAAAGGTATCGGTG
CGATAGATGACCTTGGTATCGATGCTTGTGTGATGGTTTGGTCTATGCAA
ATTTGTTTTAGCTTTGAAGAAAATAATTGTGAAAGAAATATCTGTAAGCT
TTCGGGTACCCATTCAGCTTGATAGTCCAAGTTCCTCATTTCAAACAACG
ATGGGTAAAATGTTTTGTCTATTGGCATTTCTCTTATATcactttttaca
atttttagtgCAGCTGTTATCAAGTCAACTGGAGTCCGCTCCTTCATCCT
CATAAACTCTTCCATAAAGAATTTACTCATATGTCTAAAGCCGATGATGT
CGCTTCTCCCCTCGCTCTGAAAGAAGTATATATGTTCCTTGTAGTTTTCC
ATAAGCTTCGTTTTTAAATATCTTCGACTGTAACATTCAGTTCCTCCACT
CAGCTCGATCATCTTATCATATATTTCAGTAATTGTATGCAAATCGCCAT
CACCTTCATCTAGCCATTGACATACATTCTGGAAATTTTCCATCATCGAT
GTGTCGATTGGTCTACCTAACGGCTTGTCTTTGGTGGACTTGGTCAATCG
AAAGCGGTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044152-exon-sc0005071-1491911889:37..1479 | TCONS_00044152-exon-sc0005071-1491911889:37..1479 | Clytia hemisphaerica | exon |
| TCONS_00044152-exon-sc0005071-1510915933:37..1479 | TCONS_00044152-exon-sc0005071-1510915933:37..1479 | Clytia hemisphaerica | exon |
| TCONS_00044152-exon-sc0005071-1575043694:37..1479 | TCONS_00044152-exon-sc0005071-1575043694:37..1479 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005071 | supercontig | sc0005071:37..1479 . |
Blast
The following BLAST results are available for this feature:
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