TCONS_00044083 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00044083
Unique Name	TCONS_00044083
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1977

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0004937:1..2116+

transcript sequence

>TCONS_00044083 ID=TCONS_00044083|Name=TCONS_00044083|organism=Clytia hemisphaerica|type=transcript|length=1977bp
TACTGGTAGGTATTTTGATAGCTTGCGTCAGTCCACTATATTCACTGTTA
ACAAGGGGAGGTTCAATACAGTCTAATGAAGGGTTATCAAATAAGTCTTC
TTCGACTTTGATTTCTATCGTTTCTTCTAGTTCTTGTTCGTTTGAgcaaa
agtttctttctttccCCGTTTTCAGTGTTTTACCAggtttaaatgaaaaa
tgatttccATGGTCATCAACTAACTCTACTTGTAAGAAAACATTTTCCAT
TGTGAATTGGCAAGTACCAACAACTTCATCGCCATTTTTGAGATCAAATG
ATATACACATCGGTGCTGATAATCTATTGTTGTTTGataaattgaccaaa
tttcctATTTCATAATTCATTTTAGAATCATTTGTTACTTAGatctaaaa
aaggaaaaaagaaagaataatgAGACAATAAGTAGGTAATGACCTTTTTT
TCCACTGCACTGACGAGAATCATTTGTTACTCAGAtctaaaaaaggaaaa
caaagaaTACAGAGACAATAAGTAGATAATGACCTTTCTTTCCACTGCAC
TGACgaggtaagatttttttttttaagtctcaatttctttcttttgatcA
AGACTTTTTTATTCACAACGTTATCCGTTTCATTGTTCATTTTTTCGTTT
AAAATAGCCAAAAGTGAAATGTTTAGCCCTGAACCAAACAGCTAATTTAG
CATTTTAGGATgctgtttttaattttctttgtctttctGTTTCACGAAAA
TCTACTGTTCATTTCGATGAATAAATTGAAGGATCAGTATAATTGTTCTC
AGTTCCTTAATCTAAAAGTAATTACACCTCAGTTTGAAAGCATACCTCTT
TAACttgagaaatatgaaaaaaaaagaaagacgcAAATATCAGACCAGAA
TAATAGCGCTAATaaaatttacaggaaaaaagGCCTGGATACCGGGTTAA
TAAATGTAAAAGCCACATGCCATCTCCCGAGATCCCCGAGTCGGCTTCAA
GCTGTATCTCCTTACCACTTGAGTAAAACGCTGCATGTGCAAAACTTTGC
AAATGAAAAACGTCTTGTCTAAAAGTGTTGATAAGTTAATTCCCAGTTTA
AAGTTTGGTTTAATTTCTTCTTCATCAGTGTCCTTTCTAAGGTTGAAAGC
CAGTATGAAGGCTGGTGTGTATTTAAAAGACCGACTTCTTGTGAAAAAGA
TTTTCCACAAACTTTACTACACCGTATTAGATAACATGTTGTCCTCCAGA
TTATCCTTTTCTGAAAATTCTCTTCTATAGACTTCATGACTAAAAGCTTT
TTCATCTGAATGTGTTGTGAGATGAGTTTCAAAATTATGCTTTTGTGTGT
ATTCTTTAGCACAAACTCAACCCTTAAATGGCTTTTCATTAGTATGAGTT
CTTGTGTGTCGTTCTAGAAcatcttttcgaaaaaataatttaccaCATAC
TTTGCATTTAAATTCCTTTTCAACAGTATGGGTTCTTTTGTGTCGTTCCA
TATGAgcctttcttaaaaatgatttaccACAAATTTCACAGTTATACGGC
TTTCACCAGTATGAGATCTTGTGTGGGATATTAGGTTTTCCTTTCGAGAA
AAAGTCTTACAACATTCCTGGCATCCGAAAGGCTTTTCCCCAGTGTGTAT
TCTGATGTGATTAGCAAGATTCGctttttgtgaaaatgattTCCCACATA
CCTCGCATTCAAATGGCATGTGGCCAGTATGGATTCGCATATGTCTTTTA
AGAGAGCCTTTTATTGTAAATCTATTCTCGCATACTTCACATTTAAAAGG
TTTTTCACCAGTATGAGTTCTTTTGTGCCGTTCAACATTTCTCTTGCTAG
AAAATGATTTACCACAAACCTCACATTTGAATGGCTTAACACCAGTATGG
ATTCGCATGTGAGCTTTAAGAGAACCTTTTTGTGTAAATCTGTTACCACA
TACATTACACATAAAAGGTTTCTCGCC

Run BLAST on NCBI

transcript from alignment at sc0004937:1..2116+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00044083 ID=TCONS_00044083|Name=TCONS_00044083|organism=Clytia hemisphaerica|type=transcript|length=2116bp|location=Sequence derived from alignment at sc0004937:1..2116+ (Clytia hemisphaerica)
TACTGGTAGGTATTTTGATAGCTTGCGTCAGTCCACTATATTCACTGTTA
ACAAGGGGAGGTTCAATACAGTCTAATGAAGGGTTATCAAATAAGTCTTC
TTCGACTTTGATTTCTATCGTTTCTTCTAGTTCTTGTTCGTTTGAgcaaa
agtttctttctttccCCGTTTTCAGTGTTTTACCAggtttaaatgaaaaa
tgatttccATGGTCATCAACTAACTCTACTTGTAAGAAAACATTTTCCAT
TGTGAATTGGCAAGTACCAACAACTTCATCGCCATTTTTGAGATCAAATG
ATATACACATCGGTGCTGATAATCTATTGTTGTTTGataaattgaccaaa
tttcctATTTCATAATTCATTTTAGAATCATTTGTTACTTAGatctaaaa
aaggaaaaaagaaagaataatgAGACAATAAGTAGGTAATGACCTTTTTT
TCCACTGCACTGACGAGGTAAGATTTTTTTACGtctcaatttctttcttt
tgatcAAGATTGTTTTCTTTGAGATCAAATGATATACACATCGGTGCTGA
TAGTCTATTGTTGTTTGATAAACTGACCAAATTTCCTATTTCATAATTCA
TTTTAGAATCATTTGTTACTCAGAtctaaaaaaggaaaacaaagaaTACA
GAGACAATAAGTAGATAATGACCTTTCTTTCCACTGCACTGACgaggtaa
gatttttttttttaagtctcaatttctttcttttgatcAAGACTTTTTTA
TTCACAACGTTATCCGTTTCATTGTTCATTTTTTCGTTTAAAATAGCCAA
AAGTGAAATGTTTAGCCCTGAACCAAACAGCTAATTTAGCATTTTAGGAT
gctgtttttaattttctttgtctttctGTTTCACGAAAATCTACTGTTCA
TTTCGATGAATAAATTGAAGGATCAGTATAATTGTTCTCAGTTCCTTAAT
CTAAAAGTAATTACACCTCAGTTTGAAAGCATACCTCTTTAACttgagaa
atatgaaaaaaaaagaaagacgcAAATATCAGACCAGAATAATAGCGCTA
ATaaaatttacaggaaaaaagGCCTGGATACCGGGTTAATAAATGTAAAA
GCCACATGCCATCTCCCGAGATCCCCGAGTCGGCTTCAAGCTGTATCTCC
TTACCACTTGAGTAAAACGCTGCATGTGCAAAACTTTGCAAATGAAAAAC
GTCTTGTCTAAAAGTGTTGATAAGTTAATTCCCAGTTTAAAGTTTGGTTT
AATTTCTTCTTCATCAGTGTCCTTTCTAAGGTTGAAAGCCAGTATGAAGG
CTGGTGTGTATTTAAAAGACCGACTTCTTGTGAAAAAGATTTTCCACAAA
CTTTACTACACCGTATTAGATAACATGTTGTCCTCCAGATTATCCTTTTC
TGAAAATTCTCTTCTATAGACTTCATGACTAAAAGCTTTTTCATCTGAAT
GTGTTGTGAGATGAGTTTCAAAATTATGCTTTTGTGTGTATTCTTTAGCA
CAAACTCAACCCTTAAATGGCTTTTCATTAGTATGAGTTCTTGTGTGTCG
TTCTAGAAcatcttttcgaaaaaataatttaccaCATACTTTGCATTTAA
ATTCCTTTTCAACAGTATGGGTTCTTTTGTGTCGTTCCATATGAgccttt
cttaaaaatgatttaccACAAATTTCACAGTTATACGGCTTTCACCAGTA
TGAGATCTTGTGTGGGATATTAGGTTTTCCTTTCGAGAAAAAGTCTTACA
ACATTCCTGGCATCCGAAAGGCTTTTCCCCAGTGTGTATTCTGATGTGAT
TAGCAAGATTCGctttttgtgaaaatgattTCCCACATACCTCGCATTCA
AATGGCATGTGGCCAGTATGGATTCGCATATGTCTTTTAAGAGAGCCTTT
TATTGTAAATCTATTCTCGCATACTTCACATTTAAAAGGTTTTTCACCAG
TATGAGTTCTTTTGTGCCGTTCAACATTTCTCTTGCTAGAAAATGATTTA
CCACAAACCTCACATTTGAATGGCTTAACACCAGTATGGATTCGCATGTG
AGCTTTAAGAGAACCTTTTTGTGTAAATCTGTTACCACATACATTACACA
TAAAAGGTTTCTCGCC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_027734	XLOC_027734	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00044083-exon-sc0004937-1491911889:1..467	TCONS_00044083-exon-sc0004937-1491911889:1..467	Clytia hemisphaerica	exon
TCONS_00044083-exon-sc0004937-1510915933:1..467	TCONS_00044083-exon-sc0004937-1510915933:1..467	Clytia hemisphaerica	exon
TCONS_00044083-exon-sc0004937-1575043694:1..467	TCONS_00044083-exon-sc0004937-1575043694:1..467	Clytia hemisphaerica	exon
TCONS_00044083-exon-sc0004937-1491911889:607..2116	TCONS_00044083-exon-sc0004937-1491911889:607..2116	Clytia hemisphaerica	exon
TCONS_00044083-exon-sc0004937-1510915933:607..2116	TCONS_00044083-exon-sc0004937-1510915933:607..2116	Clytia hemisphaerica	exon
TCONS_00044083-exon-sc0004937-1575043694:607..2116	TCONS_00044083-exon-sc0004937-1575043694:607..2116	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0004937	supercontig	sc0004937:1..2116 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.893846	1.08131	0.320487	0.181997	0.389505	0	0	0	0.36526	0.217383	1.06919	0.260547	0.603285	0.334423	0.103042	0.226595	0.464408	0.293657	0.39285	0.263709	0.268696	0	1.43779	1.67493	0	0.25566	0.225732	0.105326	0.277523	0.829308

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding

Blast

[Close]

BLAST of TCONS_00044083 vs. Swiss-Prot (Human)
Match: ZN568 (Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 2.479e-59
Identity = 78/142 (54.93%), Postives = 97/142 (68.31%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ C  CG  F++K +L  H +IHTG KP+KC  CGK+F    N+ RH R HTGEKP+ C+ C   F+ K +L  H RIHTG  P+EC+ CGKSFSQK NL  H +IHTGEKP+ C EC + FSR  ++  H RSHTGE
Sbjct:  246 GEKPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGE 387

HSP 2 Score: 85.1149 bits (209), Expect = 2.479e-59
Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = -3

Query: 1241 KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNLED 1552
            KPY C  CGK+F + + +  H R HT EK ++CK CGK F RK+ L  H + HT EKP++   C K + Q  N   H   H+ EK ++  V  + FS+K NL +
Sbjct:  416 KPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTE 519

HSP 3 Score: 150.599 bits (379), Expect = 8.553e-56
Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ C  C   F+QK +L  H RIHTG KP++C+ CGKSFS K+N+  H++ HTGEKP+ C  C   F+   S+  HMR HTG  P++C  CGK+FSQ +    H+R HTGEKP+ C EC K FS+  +L  H R+HT E
Sbjct:  302 GEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAE 443

HSP 4 Score: 86.6557 bits (213), Expect = 8.553e-56
Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = -3

Query: 1247 KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNL 1552
            KPY C+ CGK+F RK ++  H++ HT EK ++C  CGK F +   L RH R HT EKP+   VC K ++QK N   H   H+ EK +      + FS++ NL
Sbjct:  444 KPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNL 545

HSP 5 Score: 130.183 bits (326), Expect = 7.347e-48
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = -1

Query: 1552 VKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1890
            V PFKC  CG+ FS K ++ RH+R H GEKP++C+ C   F+ K +L  H +IHTG  P++C  CGK+F Q +NL  H RIHTGEKP+ C++C K FS+K NLI H R HTGE
Sbjct:  219 VTPFKCNQCGQDFSHKFDLIRHERIHAGEKPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGE 331

HSP 6 Score: 80.1073 bits (196), Expect = 7.347e-48
Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = -3

Query: 1220 KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNLEDNMLSNTV 1552
            KPY C+ CGKSF +K ++  H++ HT EK + C  CG+ F R   +  H R+HT EKP+K   C K ++Q   F  H+ +H+ EK +      + FS+  +L  +M ++T 
Sbjct:  332 KPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTA 442

HSP 7 Score: 167.548 bits (423), Expect = 4.477e-44
Identity = 76/142 (53.52%), Postives = 101/142 (71.13%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP++C+ CG  F+Q  SL  HMR HT  KP++C+ CGK+FS K N+  H++ HTGEKP++C  C   F    +L RH RIHTG  P+ C VCGK+FSQK+NL  H +IHTGEKP+ C +C K FS+++NL+ H + HTGE
Sbjct:  414 GEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGE 555

HSP 8 Score: 161.384 bits (407), Expect = 4.402e-42
Identity = 77/139 (55.40%), Postives = 97/139 (69.78%), Query Frame = -1

Query: 1552 PFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1968
            PF CN CG  F+ K  L  H RIH G KP++C+ CGK+FS K N+  H++ HTGEKP+KC  C   F    +L RH RIHTG  P+ C+ C K+FSQK+NL  H RIHTGEKP+ C+EC K+FS+K+NLI H + HTGE
Sbjct:  221 PFKCNQCGQDFSHKFDLIRHERIHAGEKPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGE 359

HSP 9 Score: 160.614 bits (405), Expect = 1.050e-41
Identity = 76/142 (53.52%), Postives = 95/142 (66.90%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
             EKP+ C  CG  F++K +L  H +IHTG KP++C  CGK+F    N+ RH+R HTGEKP+ C VC   F+ K +L  H +IHTG  P+ C  CGK+FSQ+ NL  H +IHTGEKPF C EC K FSR  +L  H RSHTGE
Sbjct:  442 AEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGE 583

HSP 10 Score: 159.073 bits (401), Expect = 2.635e-41
Identity = 77/142 (54.23%), Postives = 97/142 (68.31%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ C VCG  F+QK +L  H +IHTG KP+ C  CGK+FS ++N+  H++ HTGEKPFKC  C   F+   SL  H+R HTG  P+EC  CGK+FSQ + L  H+R HTGEKPF C EC K FS++ +L  H R HTGE
Sbjct:  498 GEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGEKPYECNKCGKAFSQCSLLIIHMRSHTGEKPFECNECGKAFSQRASLSIHKRGHTGE 639

HSP 11 Score: 154.836 bits (390), Expect = 9.379e-40
Identity = 75/142 (52.82%), Postives = 95/142 (66.90%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ C  CG  F+QK +L  H +IHTG KP+ C  CG++FS   +V  H R+HTGEKP+KC  C   F+       HMR HTG  P+ C  CGK+FSQ ++L  H+R HT EKP+ C+EC K FSRKENLI+H + HTGE
Sbjct:  330 GEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGE 471

HSP 12 Score: 154.451 bits (389), Expect = 1.271e-39
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ C+ CG  F Q  +L  H RIHTG KP+ C VCGK+FS K N+  H++ HTGEKP+ C  C   F+ + +L  H +IHTG  PF+C  CGK+FS+ ++L  H+R HTGEKP+ C +C K FS+   LI H RSHTGE
Sbjct:  470 GEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGEKPYECNKCGKAFSQCSLLIIHMRSHTGE 611

HSP 13 Score: 154.066 bits (388), Expect = 1.358e-39
Identity = 76/142 (53.52%), Postives = 92/142 (64.79%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ CN CG  F++  S+  HMR HTG KP+KC  CGK+FS       H R+HTGEKP+ C  C   F+   SL  HMR HT   P+EC+ CGK+FS+K NL  H +IHTGEKP+ C EC K F +  NLI H R HTGE
Sbjct:  358 GEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGE 499

HSP 14 Score: 151.369 bits (381), Expect = 1.132e-38
Identity = 73/142 (51.41%), Postives = 91/142 (64.08%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ CN CG  F+Q      HMR HTG KP+ C  CGK+FS   ++  H R HT EKP++C+ C   F+ K +L  H +IHTG  P+EC  CGK+F Q +NL  H RIHTGEKP+ C  C K FS+K NL  H + HTGE
Sbjct:  386 GEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGE 527

HSP 15 Score: 148.673 bits (374), Expect = 1.186e-37
Identity = 71/142 (50.00%), Postives = 95/142 (66.90%), Query Frame = -1

Query: 1552 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEKPFGCQECCKTFSRKENLISHTRSHTGE 1977
            GEKP+ CN CG  F Q  +L  H RIHTG KP+ C+ C K+FS K N+  H+R HTGEKP++C+ C   F+ K +L  H +IHTG  P+ C  CG++FS+ +++  H+R HTGEKP+ C +C K FS+    I H RSHTGE
Sbjct:  274 GEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGE 415

HSP 16 Score: 125.561 bits (314), Expect = 5.905e-30
Identity = 62/115 (53.91%), Postives = 79/115 (68.70%), Query Frame = -1

Query: 1633 GEKPFMCNVCGNRFTQKGSLKAHMRIHTGVKPFKCEVCGKSFSSKRNVERHKRTHTGEKPFKCEVCENRFTIKGSLKRHMRIHTGHMPFECEVCGKSFSQKANLANHIRIHTGEK 1977
            GEKP+ CN CG  F+Q+ +L  H +IHTG KPFKC  CGK+FS   ++  H R+HTGEKP++C  C   F+    L  HMR HTG  PFEC  CGK+FSQ+A+L+ H R HTGE+
Sbjct:  526 GEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHTGEKPYECNKCGKAFSQCSLLIIHMRSHTGEKPFECNECGKAFSQRASLSIHKRGHTGER 640

HSP 17 Score: 84.7297 bits (208), Expect = 4.708e-17
Identity = 49/127 (38.58%), Postives = 71/127 (55.91%), Query Frame = -3

Query: 1223 FSKGKPNIPH-KISYW*KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNLEDNMLSNT 1600
            FS+ +  I H KI    KPY C  CGK+F++ +++ RH+R HT EK + C VCGK F +K  L  H + HT EKP+    C K ++Q+ N   H   H+ EK F      + FS   +L  ++ S+T
Sbjct:  455 FSRKENLITHQKIHTGEKPYECSECGKAFIQMSNLIRHQRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEHEKIHTGEKPFKCNECGKAFSRISSLTLHVRSHT 581

HSP 18 Score: 83.5741 bits (205), Expect = 1.303e-16
Identity = 44/102 (43.14%), Postives = 60/102 (58.82%), Query Frame = -3

Query: 1247 KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNL 1552
            KPY C+ CGK+F RK ++  H++ HT EK +KC  CGK F +   L RH R HT EKP+    C K ++QK N   H   H+ EK +  +   + FS+K NL
Sbjct:  248 KPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNL 349

HSP 19 Score: 83.1889 bits (204), Expect = 1.551e-16
Identity = 50/127 (39.37%), Postives = 71/127 (55.91%), Query Frame = -3

Query: 1223 FSKGKPNIPH-KISYW*KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNLEDNMLSNT 1600
            FS+ +  I H KI    KPY C  CGK+F++ +++ RH R HT EK + CK C K F +K  L  H R HT EKP++   C K ++QK N   H   H+ EK ++     R FS   ++  +M S+T
Sbjct:  259 FSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNLIEHERIHTGEKPYECKECGKSFSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHT 385

HSP 20 Score: 81.2629 bits (199), Expect = 7.167e-16
Identity = 47/115 (40.87%), Postives = 63/115 (54.78%), Query Frame = -3

Query: 1247 GKPNIPHKISYW*KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNL 1591
            GKP   H  SY   P+ C  CG+ F  K  + RH+R H  EK ++CK CGK F RK+ L  H + HT EKP+K   C K + Q  N   H   H+ EK ++ +   + FS+K NL
Sbjct:  208 GKP-FYHCASYVVTPFKCNQCGQDFSHKFDLIRHERIHAGEKPYECKECGKAFSRKENLITHQKIHTGEKPYKCNECGKAFIQMSNLIRHHRIHTGEKPYACKDCWKAFSQKSNL 321

HSP 21 Score: 80.8777 bits (198), Expect = 7.616e-16
Identity = 46/119 (38.66%), Postives = 66/119 (55.46%), Query Frame = -3

Query: 1247 FSKGKPNIPH-KISYW*KPYNCEICGKSFLRKAHMERHKRTHTVEKEFKCKVCGKLFFRKDVLERHTRTHTNEKPFKG*VCAKEYTQKHNFETHLTTHSDEKAFSHEVYRREFSEKDNL 1600
            FS+ +  I H KI    KPY C  CG++F R + +  H R+HT EK +KC  CGK F +  V   H R+HT EKP+    C K ++Q  +   H+  H+ EK +  +   + FS K+NL
Sbjct:  343 FSQKQNLIEHEKIHTGEKPYACNECGRAFSRMSSVTLHMRSHTGEKPYKCNKCGKAFSQCSVFIIHMRSHTGEKPYVCSECGKAFSQSSSLTVHMRNHTAEKPYECKECGKAFSRKENL 461

The following BLAST results are available for this feature:

BLAST of TCONS_00044083 vs. Swiss-Prot (Human)

BLAST of TCONS_00044083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZN568	2.479e-59	54.93	Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 ...	[more]

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TCONS_00044083 (transcript) - C. hemisphaerica