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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044018 ID=TCONS_00044018|Name=TCONS_00044018|organism=Clytia hemisphaerica|type=transcript|length=505bp
NTATTATTGGTTTCCTTATTGCGACTATCCTCAGCTGACTTTGTGTGGTC
GCCAGCAGAAAGTACCGAAAATATGCTAGTAAAGGATCGCAAATGTGTGA
AGGAGACCAAAGAAATCGCAATCAAGATATCGTTTTTAACACTTCGAATA
ACAATCATACTGGAAACGTTTGGAATGATTATCACAAAGATGCCAGAAAG
GAAGGACGGAAGAGaaagaacatcaaatttttgatttcattacgTATTAA
TTTATACTGATTGTAGATTTTCATACCCAGAAAATTGTATAGAAAAaagc
attcaaagaaaattcaaatgtgtGTACGGTCTTTATCATAATAGTGCAAT
GAATAGGAGTTATTTTGGCAAAGAACGTCTTAGAGACGTGTTCAAACTAa
tctaaaataacttttaaagacGTTTTTAAGTCGTCTCAGAAACGTACCAT
accgaaattaataaaattaagaCGTCCCGGAAACGTCCTAGAGACGTCCA
TAATT Run BLAST on NCBI transcript from alignment at sc0004851:118..1080- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044018 ID=TCONS_00044018|Name=TCONS_00044018|organism=Clytia hemisphaerica|type=transcript|length=963bp|location=Sequence derived from alignment at sc0004851:118..1080- (Clytia hemisphaerica)
NTATTATTGGTTTCCTTATTGCGACTATCCTCAGCTGACTTTGTGTGGTC
GCCAGCAGAAAGTACCGAAAATATGCTAGTAAAGGTAGGTGAGATGTAAC
AAGACTTTAATAACATCTTTCCAAAACTATGCTGATTTCTTGCGAATACC
CCTGCATCACTGAGTGAGGTTGGTACTTCAAACTACTGAAATTTGACTTG
AAAACACCCCTGTCTCAACGACAATAATTTAGCAAAGTCCTTGGTAGAAT
ACATTTCGTGAAACATAAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAGTT
TGGCCATGAAATTTAAGAAGTTTTTTCTTTATCCTTCTGGAGCATTCTTT
TTCCCGTGGAAAGAAAAGATAGTTTTCAACGTCTCAACCGCAGCTAAAAA
TCTTTAAACATCAAATTTACTATTTGTCTGTTATTTTTTCAGGATCGCAA
ATGTGTGAAGGAGACCAAAGAAATCGCAATCAAGATATCGTTTTTAACAC
TTCGAATAACAATCATACTGGAAACGTTTGGAATGATTATCACAAAGATG
CCAGAAAGGAAGGACGGAAGAGAAAGAACATCAAATTTTTGATTTCATTA
CGTATTAATTTATACTGATTGTAGATTTTCATACCCAGAAAATTGTATAG
AAAAAAGCATTCAAAGAAAATTCAAATGTGTGTACGGTCTTTATCATAAT
AGTGCAATGAATAGGAGTTATTTTGGCAAAGAACGTCTTAGAGACGTGTT
CAAACTAATCTAAAATAACTTTTAAAGACGTTTTTAAGTCGTCTCAGAAA
CGTACCATACCGAAATTAATAAAATTAAGACGTCCCGGAAACGTCCTAGA
GACGTCCATAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044018-exon-sc0004851-1575043694:997..1080 | TCONS_00044018-exon-sc0004851-1575043694:997..1080 | Clytia hemisphaerica | exon |
| TCONS_00044018-exon-sc0004851-1575043694:118..538 | TCONS_00044018-exon-sc0004851-1575043694:118..538 | Clytia hemisphaerica | exon |
| TCONS_00044018-exon-sc0004851-1510915933:997..1080 | TCONS_00044018-exon-sc0004851-1510915933:997..1080 | Clytia hemisphaerica | exon |
| TCONS_00044018-exon-sc0004851-1510915933:118..538 | TCONS_00044018-exon-sc0004851-1510915933:118..538 | Clytia hemisphaerica | exon |
| TCONS_00044018-exon-sc0004851-1491911889:997..1080 | TCONS_00044018-exon-sc0004851-1491911889:997..1080 | Clytia hemisphaerica | exon |
| TCONS_00044018-exon-sc0004851-1491911889:118..538 | TCONS_00044018-exon-sc0004851-1491911889:118..538 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004851 | supercontig | sc0004851:118..1080 - |
Blast
The following BLAST results are available for this feature:
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