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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043947 ID=TCONS_00043947|Name=TCONS_00043947|organism=Clytia hemisphaerica|type=transcript|length=728bp NAATGAAGCGGAGACGATTTGTCAATATCACAATCATTGCGGACTGCTTT CACTAAACTCAAGAAGTGTCCGAGACAGTttACCGATTGTTACCATTATT AGCTGTTCAGGGAGAGCGTGCTGCTTGAGAgtcgtgaagaagaaaataag aaccaccttttttattaaatttaagAATTCATAATAACATACGTTACGAA AtacataaaacattaaaaaaagtggcgaaaattaaaaatgaggtCACTGA TCATTACAATCAAGTTATAATAGAATAGAGACTGTAACTTCGttggtctt tcttttctttctgggCGTTCTTTTCATTCTCTCATGCACACGCACCACTG TCTCAATGCCGAcccggtggagctttttccttcagtgtggatgaaaattt caccggATCTCTGACACATAGGTATTCTCCAGAAGGTTTCCAGATTCTTG CCTTCGCCAACGAATGTGTATCATTATGATATTACGACAgtggaaaatgt ggaaaatacacGTCTCATCTGGATAAATGATATTGCAATTGTGTTcccat aaaaatgaaaatgactgaaatgaaaaagaaaaaaagaaaatagcacAAAA GAATTGTTGTGATTCATCCAATCTAGACCACTGGACACCTAGTAATAAGC ATGGAGTGGCAAAATCAGGGTTCTGAAACATCGTTATCTCACAATGCCCG TATTCTATTCCTTCGCcacagcattttt Run BLAST on NCBI transcript from alignment at sc0004758:3442..4409+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043947 ID=TCONS_00043947|Name=TCONS_00043947|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at sc0004758:3442..4409+ (Clytia hemisphaerica) NAATGAAGCGGAGACGATTTGTCAATATCACAATCATTGCGGACTGCTTT
CACTAAACTCAAGAAGTGTCCGAGACAGTGTAAGTTACATTGTTATATGT
ATGAAACATATAATCTCATCTATGTTGAAatctagcttgttttttgtGCT
TCTCATCAATTAGTGTGCGTTGTTTCTTGTCACCGTAACTTCGGCAGTTT
ATCTGCCGACTTTTGAGCGACTGTCAATTTGTCTATATAGtttcaagctt
aaaaaatcTACAGTACCATTGATCTTCTAACAGTCATATGAATGATAata
ctttttcttctttatttagttACCGATTGTTACCATTATTAGCTGTTCAG
GGAGAGCGTGCTGCTTGAGAgtcgtgaagaagaaaataagaaccaccttt
tttattaaatttaagAATTCATAATAACATACGTTACGAAAtacataaaa
cattaaaaaaagtggcgaaaattaaaaatgaggtCACTGATCATTACAAT
CAAGTTATAATAGAATAGAGACTGTAACTTCGttggtctttcttttcttt
ctgggCGTTCTTTTCATTCTCTCATGCACACGCACCACTGTCTCAATGCC
GAcccggtggagctttttccttcagtgtggatgaaaatttcaccggATCT
CTGACACATAGGTATTCTCCAGAAGGTTTCCAGATTCTTGCCTTCGCCAA
CGAATGTGTATCATTATGATATTACGACAgtggaaaatgtggaaaataca
cGTCTCATCTGGATAAATGATATTGCAATTGTGTTcccataaaaatgaaa
atgactgaaatgaaaaagaaaaaaagaaaatagcacAAAAGAATTGTTGT
GATTCATCCAATCTAGACCACTGGACACCTAGTAATAAGCATGGAGTGGC
AAAATCAGGGTTCTGAAACATCGTTATCTCACAATGCCCGTATTCTATTC
CTTCGCcacagcattttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00043947-exon-sc0004758-1491911889:3442..3520 | TCONS_00043947-exon-sc0004758-1491911889:3442..3520 | Clytia hemisphaerica | exon |
TCONS_00043947-exon-sc0004758-1510915933:3442..3520 | TCONS_00043947-exon-sc0004758-1510915933:3442..3520 | Clytia hemisphaerica | exon |
TCONS_00043947-exon-sc0004758-1575043694:3442..3520 | TCONS_00043947-exon-sc0004758-1575043694:3442..3520 | Clytia hemisphaerica | exon |
TCONS_00043947-exon-sc0004758-1491911889:3761..4409 | TCONS_00043947-exon-sc0004758-1491911889:3761..4409 | Clytia hemisphaerica | exon |
TCONS_00043947-exon-sc0004758-1510915933:3761..4409 | TCONS_00043947-exon-sc0004758-1510915933:3761..4409 | Clytia hemisphaerica | exon |
TCONS_00043947-exon-sc0004758-1575043694:3761..4409 | TCONS_00043947-exon-sc0004758-1575043694:3761..4409 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0004758 | supercontig | sc0004758:3442..4409 + |
Blast
The following BLAST results are available for this feature:
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