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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043928 ID=TCONS_00043928|Name=TCONS_00043928|organism=Clytia hemisphaerica|type=transcript|length=1163bp
TTttcaaggaagaaaaaattagagAGAGCTTGATTGTTCTTTCTTTGTTT
CGATGTAACAGTCTAGGTATTAAAAGACGAGtggtttttcttgaaaagaa
aaaaaaatttaattgatttGAATTTATGCACCATATAAGTCGAAACGCTT
TCTGTTTAGAAAAGAttaatttgataaaaactaAATGAAAGATGGGAAAG
ACCGCAGGAAAGGTATCAACGCAAAAAGGTACAAAACACCAATATCCAGC
AACGCGTAAAAGTTACACACATAGTCGAAAAGGAATTGGTGGTagaaaaa
agaaacaagaaaGGATTCTAAAACCTGCAAAGAAAACTTATTTTGATGAG
CTTCTACAAAGGCAGAAAGAGAAAGGTtagttttttatatatttcttttA
GATAATAGAAGTTCCTTGCTATGTTCCACCATCCGTATCAGGGTTCTAAA
TTCCATCGCTATAATTTATAACGAATTGGAGTGTGACATTGACCGTTACT
ATACATTCCGTTACATTCAGAGTGTATTCGTCATCTTTTATTACTATAAC
TAcgctttttcaaatataattaattaaaaaaatatccttTTCTAATGCAG
ATCAATCACTCGCCAGTTGCTCGAAGGAAAGTGGCTTAAATGAAGAACAA
AATCCAGAGAGgtattcaattttttcgctATTAAAACGTTTAGAACGTTT
TTAACAATTTAGAAAGCTCTTTATACTGCTCAGTAGAGTTCAAAGCCTAG
GGTTAAAAATAGGATTGATGTAAAGTATCATCTATAATTATTCATTCGTT
CCCGTCAGTAAATAGCTGAAAAGCACTTTCtcactcaaaataattctatC
AACAGTGGTAGTCTGATAATGTAACTTTTTCAAGACCGTTATACTAATTC
TTTATAGCATATCAGATGACGAAAGTTCTAGCAACACAAAAACCGATACT
GAAGAAGATGAATGGTATAACGAAAATGTCagcgaagaagaagaagaagg
tgATTCAAAGCTAGAATCAGGAAGTGACTCAGAGCTTGAAAGATCAGAAA
TTGATTCAAATAACAACTACGCAGGACCTGAGGATGGTTTGGATATTTCC
ACTTCTAGCAAGATCGATTACAGAAACTTTCGCCTGGGACCTTACGTAGA
ACAATTTCCTTNN Run BLAST on NCBI transcript from alignment at sc0004741:1067..2229+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043928 ID=TCONS_00043928|Name=TCONS_00043928|organism=Clytia hemisphaerica|type=transcript|length=1163bp|location=Sequence derived from alignment at sc0004741:1067..2229+ (Clytia hemisphaerica)
TTttcaaggaagaaaaaattagagAGAGCTTGATTGTTCTTTCTTTGTTT
CGATGTAACAGTCTAGGTATTAAAAGACGAGtggtttttcttgaaaagaa
aaaaaaatttaattgatttGAATTTATGCACCATATAAGTCGAAACGCTT
TCTGTTTAGAAAAGAttaatttgataaaaactaAATGAAAGATGGGAAAG
ACCGCAGGAAAGGTATCAACGCAAAAAGGTACAAAACACCAATATCCAGC
AACGCGTAAAAGTTACACACATAGTCGAAAAGGAATTGGTGGTagaaaaa
agaaacaagaaaGGATTCTAAAACCTGCAAAGAAAACTTATTTTGATGAG
CTTCTACAAAGGCAGAAAGAGAAAGGTtagttttttatatatttcttttA
GATAATAGAAGTTCCTTGCTATGTTCCACCATCCGTATCAGGGTTCTAAA
TTCCATCGCTATAATTTATAACGAATTGGAGTGTGACATTGACCGTTACT
ATACATTCCGTTACATTCAGAGTGTATTCGTCATCTTTTATTACTATAAC
TAcgctttttcaaatataattaattaaaaaaatatccttTTCTAATGCAG
ATCAATCACTCGCCAGTTGCTCGAAGGAAAGTGGCTTAAATGAAGAACAA
AATCCAGAGAGgtattcaattttttcgctATTAAAACGTTTAGAACGTTT
TTAACAATTTAGAAAGCTCTTTATACTGCTCAGTAGAGTTCAAAGCCTAG
GGTTAAAAATAGGATTGATGTAAAGTATCATCTATAATTATTCATTCGTT
CCCGTCAGTAAATAGCTGAAAAGCACTTTCtcactcaaaataattctatC
AACAGTGGTAGTCTGATAATGTAACTTTTTCAAGACCGTTATACTAATTC
TTTATAGCATATCAGATGACGAAAGTTCTAGCAACACAAAAACCGATACT
GAAGAAGATGAATGGTATAACGAAAATGTCagcgaagaagaagaagaagg
tgATTCAAAGCTAGAATCAGGAAGTGACTCAGAGCTTGAAAGATCAGAAA
TTGATTCAAATAACAACTACGCAGGACCTGAGGATGGTTTGGATATTTCC
ACTTCTAGCAAGATCGATTACAGAAACTTTCGCCTGGGACCTTACGTAGA
ACAATTTCCTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043928-exon-sc0004741-1491911889:1067..2229 | TCONS_00043928-exon-sc0004741-1491911889:1067..2229 | Clytia hemisphaerica | exon |
| TCONS_00043928-exon-sc0004741-1510915933:1067..2229 | TCONS_00043928-exon-sc0004741-1510915933:1067..2229 | Clytia hemisphaerica | exon |
| TCONS_00043928-exon-sc0004741-1575043694:1067..2229 | TCONS_00043928-exon-sc0004741-1575043694:1067..2229 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004741 | supercontig | sc0004741:1067..2229 + |
Blast
The following BLAST results are available for this feature:
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