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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043909 ID=TCONS_00043909|Name=TCONS_00043909|organism=Clytia hemisphaerica|type=transcript|length=1181bp
ATATCAATGAAGTAATAAAACAAACTGACCACATTTACAGTTACTAGATC
CATGTCTTGTTTTGTAGTGGGTACCAGAGAAAAGAGTAAACTTCATGTCA
GTAAATGAAATTCATCATGCATTAAATAAGAAGGCAGATTTTGCTTATTA
TGGCAATCTATAAATGAAATGTGGTTTATTTTTCCCCAAGATAGTaatgt
tagaaagcatttcaTAGTAACGAGCGTGTAATTTCTTTCATTCAAAATCT
GAACCTAAGGTCTGTAAGGAAATGGGGttgttttaagtttttcatttgTG
AATAATGGGACTGAATTTGTGCAAAAATCGTGTTTAAATTTGACAATTGA
TATTAGATTTTCAATAGATTTTGTTGTACTTGCATAGTGTGAACAAAGAT
CTGTCACATAATCTAGAGTCTCTCTAACTCTGAATTCAAGTGCCAAATTt
aagaataaataaaacttgCTTTAAACTACTAATTCTGAAACTTAAGAAAC
TAATACAGTCACAAATTGCAGACTACTAAATTGACCAAGACTTGTGTCAA
AATATGTACTATGGTATTTGTGAAGTGTCCTCTATTTtcactttactttt
cttttaagaaatagaaaattgtatcaagatttattttagtttttctatTT
AGTTCGTAataaaatcatttatttttatttttgttgatgaAGTTGATAAT
TATGAAATACCACGGGTCCTCTTACTTACCttagtttgattgtttttatc
ttttttaacaTGTGATGTGTTCATTTTATGAGGCATGCAAAGATCAGAAA
TAAGTGAAAGTAGAtcaaaaaatgcttaaaatagtttattttacattttt
tgctgaaattAACATTTCAAGTTTCTTTATGGGAAAATAATGTAATGGCA
ATTGAAAATTAAGCTTCCGTAAAATTTATCCTTATATCTTTAAagtaaaa
aacatttctttttagAAATGGATCCAAACTCACTCACATCATTCAATTCA
TTGAATTATGATTTTGGATAACTTTAATAAATCGATAAATATGGATTTGC
TGTAGTTTTAAAACCGTGTGACTTTCTTCCTAAAGAAAAAGTGGAATtga
aataaattagaatataCTACGGTTATTGTATTATATCGGAtgattttcta
tcaattttcgTTCATCAACCTTTAATTAATT Run BLAST on NCBI transcript from alignment at sc0004718:663..1843 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043909 ID=TCONS_00043909|Name=TCONS_00043909|organism=Clytia hemisphaerica|type=transcript|length=1181bp|location=Sequence derived from alignment at sc0004718:663..1843 (Clytia hemisphaerica)
AATTAATTAAAGGTTGATGAAcgaaaattgatagaaaatcaTCCGATATA
ATACAATAACCGTAGtatattctaatttatttcaATTCCACTTTTTCTTT
AGGAAGAAAGTCACACGGTTTTAAAACTACAGCAAATCCATATTTATCGA
TTTATTAAAGTTATCCAAAATCATAATTCAATGAATTGAATGATGTGAGT
GAGTTTGGATCCATTTctaaaaagaaatgttttttactTTAAAGATATAA
GGATAAATTTTACGGAAGCTTAATTTTCAATTGCCATTACATTATTTTCC
CATAAAGAAACTTGAAATGTTaatttcagcaaaaaatgtaaaataaacta
ttttaagcattttttgaTCTACTTTCACTTATTTCTGATCTTTGCATGCC
TCATAAAATGAACACATCACAtgttaaaaaagataaaaacaatcaaacta
aGGTAAGTAAGAGGACCCGTGGTATTTCATAATTATCAACTtcatcaaca
aaaataaaaataaatgattttatTACGAACTAAatagaaaaactaaaata
aatcttgatacaattttctatttcttaaaagaaaagtaaagtgaAAATAG
AGGACACTTCACAAATACCATAGTACATATTTTGACACAAGTCTTGGTCA
ATTTAGTAGTCTGCAATTTGTGACTGTATTAGTTTCTTAAGTTTCAGAAT
TAGTAGTTTAAAGcaagttttatttattcttaAATTTGGCACTTGAATTC
AGAGTTAGAGAGACTCTAGATTATGTGACAGATCTTTGTTCACACTATGC
AAGTACAACAAAATCTATTGAAAATCTAATATCAATTGTCAAATTTAAAC
ACGATTTTTGCACAAATTCAGTCCCATTATTCAcaaatgaaaaacttaaa
acaaCCCCATTTCCTTACAGACCTTAGGTTCAGATTTTGAATGAAAGAAA
TTACACGCTCGTTACTAtgaaatgctttctaacattACTATCTTGGGGAA
AAATAAACCACATTTCATTTATAGATTGCCATAATAAGCAAAATCTGCCT
TCTTATTTAATGCATGATGAATTTCATTTACTGACATGAAGTTTACTCTT
TTCTCTGGTACCCACTACAAAACAAGACATGGATCTAGTAACTGTAAATG
TGGTCAGTTTGTTTTATTACTTCATTGATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043909-exon-sc0004718-1491911889:663..1843 | TCONS_00043909-exon-sc0004718-1491911889:663..1843 | Clytia hemisphaerica | exon |
| TCONS_00043909-exon-sc0004718-1510915933:663..1843 | TCONS_00043909-exon-sc0004718-1510915933:663..1843 | Clytia hemisphaerica | exon |
| TCONS_00043909-exon-sc0004718-1575043694:663..1843 | TCONS_00043909-exon-sc0004718-1575043694:663..1843 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004718 | supercontig | sc0004718:663..1843 . |
Blast
The following BLAST results are available for this feature:
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