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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043907 ID=TCONS_00043907|Name=TCONS_00043907|organism=Clytia hemisphaerica|type=transcript|length=1458bp
CCCCCGGCAGCCTGGGATAATAATATTTCGTTTCTGCACATGTGCCGAAA
AGATCTCACgaatttcaaattcagaaagAAACGTGAAAGCTGAcatttac
agaaagaaaaatagcagttgtaaaagaaaacaaatcgTGTAAATTGCTTG
ACAGTAAATTGtgtaaaagaaacaaaatatcACCAGTTGGAGTGTCGTAG
GTATTTTCCTTGATATTTTTGAACTGTATCTCATTTTCTTTGTGAAGTTT
CTCCTGATTCCACTATGATCTTGCTATGTGCCAATGATTAAAAGCATTAC
AATCACAGTCATTTTGCAGTTCAAAAAGGACTTCTGGTAGTCTGAGGACT
TTTCTCGTTGTTTGAGAGTTCTGCAATCTAGTCAACACAGTTCTCTATTT
CATCCCTTTAACAACCCACTGTATGACCCAAACATACGAACATACCTAGA
TTTTTGCCTTCAAAAACATGTCCTGGGCAGCCAGTTTGGGTCGTACTTGG
AATTTTATTATGTACTAAATCGCTGAGCGTGCGGGAAAAATTCAGGCAAA
GCTGTTAGTCGTTCTTCTAAACAATTGTTAAAAACTATTACAAACAGTAA
AAATTCTAAGTATCGTTGCGCTTTAAATGAGAAccatttaaataattttt
atggCTGGAACAGCAAGCATCGCCTTCCTGCctagcttcaaaaaattttt
cctctAAAAAGTCAACTGGAATCCTAGGGTGTGGACAAGTTGAGAATAAT
GGTGAAATATTGCATGCCAATGATATGGAAAAGAAACTGGCCAAACTGGC
CATGGTGTGCAGGGAtttttttcagtgttttcatTGCATGGCGGAGGTTA
TTGGCTGTATAGGTCCACCACATTTGATAATTTTCCAACTGGCAATGTCA
TCTGATGTCATCAGTCATTTGAGACAAGTATAttgattgaaaatttctaa
aataaacttGCCAATTTATTGGTAATAGAATTTCTTGAGAAAGAAGACTT
GGACTCACTCAGGATTTTGGAGAACAAATTGGaatattttaatcaatttt
tactattttggcactaaaatttatattttttttagaatgagTAATTTTCT
AATCATTAACATTTTTGtcatttgtattgtctttttcaAGAGGATAAATT
AATCTTGTGTCTCTCTGTAAACAGTTCAAAGTGTGATGTATGTCTTTACA
AGTGCAAATCAAAGTCCATTGACAGTCATTTTGTaggtcaaaattttcaa
gttttaaaaatgCTATGGAAATTTTACGAAAAAGTTTCTCAGGATCAATA
TTTCTACTGGTTCAAACATTTCTCCAAAATTTTAGAGGGTGATTCCATTC
CTATCAAAGGTTGTTTTCATAGTAAAGGGTGTTTAAATTGCTTTTGATCA
AAAAGGTATGTCAACCTCATGGGTAAAAGCATGTAATGTAAATTATTAAA
ATGATCAG Run BLAST on NCBI transcript from alignment at sc0004718:2001..3458- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043907 ID=TCONS_00043907|Name=TCONS_00043907|organism=Clytia hemisphaerica|type=transcript|length=1458bp|location=Sequence derived from alignment at sc0004718:2001..3458- (Clytia hemisphaerica)
CCCCCGGCAGCCTGGGATAATAATATTTCGTTTCTGCACATGTGCCGAAA
AGATCTCACGAATTTCAAATTCAGAAAGAAACGTGAAAGCTGACATTTAC
AGAAAGAAAAATAGCAGTTGTAAAAGAAAACAAATCGTGTAAATTGCTTG
ACAGTAAATTGTGTAAAAGAAACAAAATATCACCAGTTGGAGTGTCGTAG
GTATTTTCCTTGATATTTTTGAACTGTATCTCATTTTCTTTGTGAAGTTT
CTCCTGATTCCACTATGATCTTGCTATGTGCCAATGATTAAAAGCATTAC
AATCACAGTCATTTTGCAGTTCAAAAAGGACTTCTGGTAGTCTGAGGACT
TTTCTCGTTGTTTGAGAGTTCTGCAATCTAGTCAACACAGTTCTCTATTT
CATCCCTTTAACAACCCACTGTATGACCCAAACATACGAACATACCTAGA
TTTTTGCCTTCAAAAACATGTCCTGGGCAGCCAGTTTGGGTCGTACTTGG
AATTTTATTATGTACTAAATCGCTGAGCGTGCGGGAAAAATTCAGGCAAA
GCTGTTAGTCGTTCTTCTAAACAATTGTTAAAAACTATTACAAACAGTAA
AAATTCTAAGTATCGTTGCGCTTTAAATGAGAACCATTTAAATAATTTTT
ATGGCTGGAACAGCAAGCATCGCCTTCCTGCCTAGCTTCAAAAAATTTTT
CCTCTAAAAAGTCAACTGGAATCCTAGGGTGTGGACAAGTTGAGAATAAT
GGTGAAATATTGCATGCCAATGATATGGAAAAGAAACTGGCCAAACTGGC
CATGGTGTGCAGGGATTTTTTTCAGTGTTTTCATTGCATGGCGGAGGTTA
TTGGCTGTATAGGTCCACCACATTTGATAATTTTCCAACTGGCAATGTCA
TCTGATGTCATCAGTCATTTGAGACAAGTATATTGATTGAAAATTTCTAA
AATAAACTTGCCAATTTATTGGTAATAGAATTTCTTGAGAAAGAAGACTT
GGACTCACTCAGGATTTTGGAGAACAAATTGGAATATTTTAATCAATTTT
TACTATTTTGGCACTAAAATTTATATTTTTTTTAGAATGAGTAATTTTCT
AATCATTAACATTTTTGTCATTTGTATTGTCTTTTTCAAGAGGATAAATT
AATCTTGTGTCTCTCTGTAAACAGTTCAAAGTGTGATGTATGTCTTTACA
AGTGCAAATCAAAGTCCATTGACAGTCATTTTGTAGGTCAAAATTTTCAA
GTTTTAAAAATGCTATGGAAATTTTACGAAAAAGTTTCTCAGGATCAATA
TTTCTACTGGTTCAAACATTTCTCCAAAATTTTAGAGGGTGATTCCATTC
CTATCAAAGGTTGTTTTCATAGTAAAGGGTGTTTAAATTGCTTTTGATCA
AAAAGGTATGTCAACCTCATGGGTAAAAGCATGTAATGTAAATTATTAAA
ATGATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043907-exon-sc0004718-1575043694:2001..3458 | TCONS_00043907-exon-sc0004718-1575043694:2001..3458 | Clytia hemisphaerica | exon |
| TCONS_00043907-exon-sc0004718-1510915933:2001..3458 | TCONS_00043907-exon-sc0004718-1510915933:2001..3458 | Clytia hemisphaerica | exon |
| TCONS_00043907-exon-sc0004718-1491911889:2001..3458 | TCONS_00043907-exon-sc0004718-1491911889:2001..3458 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004718 | supercontig | sc0004718:2001..3458 - |
Blast
The following BLAST results are available for this feature:
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