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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043652 ID=TCONS_00043652|Name=TCONS_00043652|organism=Clytia hemisphaerica|type=transcript|length=1007bp
CCATCacggtggacacaagaacacagagaacacaagattcagccttacta
ttttaaaatttatttttccaatcGAAAAAATCATGACGAATCTAGGCTGA
GAGATTATGTCAAGCCTGATGGTGAATCTAGCCCGTGAACATTTTTAGCC
TGAATGACCAGTTCTTtatcagccaatcagattgcttctTTACTTACTTC
ACCTTAACCCACGGTTTCAAGGAAATGATTTTTGGGAACCCCGTTTTATA
ATGTTTGAGACAACAGTGAGTGTTCAAATTGGCACCTTTTATCGCTTGGT
CAGCACTTTTTCGAGGTatttttggccgaaaaagtACCCTTTATTGTTTG
ATTTTACGAATCTTTTCCGAAACGGCTTCTCCTTGAGGCTCTGAGGATGT
TTATCTTTTAGGGGTACTGGTTTGCCCGAAAACGGGTGTGTGTCGCTTAa
ttcttgaaattgaaatttagtcacaattcaagaaaaaaaattgggagTTT
GACTGATTTTTACCGAAATGTAACTTTTGGAgggtcaaaaaatattttcg
ttcgATATTTGCTTTTTTATAACCCTTAGGGGGACCAAAGTAGATTTTAT
ATTATTCACTACCCTCAGCGGGATTTCAAAGTTCAAACAGCAACCAAGTG
CTAAAATTCCGCTTCTAATAGTATATACAAAGGAATCTGACTTTTAAAAG
AGCTAAATACTGATACTGATTTTGATGttatattttgtataaaattgtAA
CATGCATTATAGACTTTGAGATTACACCTTATATCTATGATTTTGTCAAT
TCTTTGAGGGTTTGTTTTACTTTGTTCAGtttcttttcttcaattttcat
aaaagtgatgcacttttcttttttataccgcatattttttttagctttat
aAAATGGATAATTTAAGtagaatttttatattatttatctCATAGAATAA
TgaccaaaaacattttaaatacTTTCAAgggaaaaaaacttttgcagagt
aataaac Run BLAST on NCBI transcript from alignment at sc0004435:5473..6479 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043652 ID=TCONS_00043652|Name=TCONS_00043652|organism=Clytia hemisphaerica|type=transcript|length=1007bp|location=Sequence derived from alignment at sc0004435:5473..6479 (Clytia hemisphaerica)
gtttattactctgcaaaagtttttttcccTTGAAAgtatttaaaatgttt
ttggtcATTATTCTATGagataaataatataaaaattctaCTTAAATTAT
CCATTTtataaagctaaaaaaaatatgcggtataaaaaagaaaagtgcat
cacttttatgaaaattgaagaaaagaaaCTGAACAAAGTAAAACAAACCC
TCAAAGAATTGACAAAATCATAGATATAAGGTGTAATCTCAAAGTCTATA
ATGCATGTTacaattttatacaaaatataaCATCAAAATCAGTATCAGTA
TTTAGCTCTTTTAAAAGTCAGATTCCTTTGTATATACTATTAGAAGCGGA
ATTTTAGCACTTGGTTGCTGTTTGAACTTTGAAATCCCGCTGAGGGTAGT
GAATAATATAAAATCTACTTTGGTCCCCCTAAGGGTTATAAAAAAGCAAA
TATcgaacgaaaatattttttgacccTCCAAAAGTTACATTTCGGTAAAA
ATCAGTCAAActcccaattttttttcttgaattgtgactaaatttcaatt
tcaagaatTAAGCGACACACACCCGTTTTCGGGCAAACCAGTACCCCTAA
AAGATAAACATCCTCAGAGCCTCAAGGAGAAGCCGTTTCGGAAAAGATTC
GTAAAATCAAACAATAAAGGGTactttttcggccaaaaatACCTCGAAAA
AGTGCTGACCAAGCGATAAAAGGTGCCAATTTGAACACTCACTGTTGTCT
CAAACATTATAAAACGGGGTTCCCAAAAATCATTTCCTTGAAACCGTGGG
TTAAGGTGAAGTAAGTAAagaagcaatctgattggctgataAAGAACTGG
TCATTCAGGCTAAAAATGTTCACGGGCTAGATTCACCATCAGGCTTGACA
TAATCTCTCAGCCTAGATTCGTCATGATTTTTTCgattggaaaaataaat
tttaaaatagtaaggctgaatcttgtgttctctgtgttcttgtgtccacc
gtGATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043652-exon-sc0004435-1491911889:5473..6479 | TCONS_00043652-exon-sc0004435-1491911889:5473..6479 | Clytia hemisphaerica | exon |
| TCONS_00043652-exon-sc0004435-1510915933:5473..6479 | TCONS_00043652-exon-sc0004435-1510915933:5473..6479 | Clytia hemisphaerica | exon |
| TCONS_00043652-exon-sc0004435-1575043694:5473..6479 | TCONS_00043652-exon-sc0004435-1575043694:5473..6479 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004435 | supercontig | sc0004435:5473..6479 . |
Blast
The following BLAST results are available for this feature:
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