TCONS_00043632 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043632
Unique NameTCONS_00043632
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043632 ID=TCONS_00043632|Name=TCONS_00043632|organism=Clytia hemisphaerica|type=transcript|length=391bp
ggACCATCTCAAGTCAAAACCCCCAAAAATCgcctaactttttcaaaaga
acttttttgtctttaacaaaggataaataaatgaggttaacttattttta
tttgcTACTTTACATGCTAACGCAAAATTTATTCAGGATCACAATGATAT
ATACATTATAGAGGTTAAGTGTTGAATTTAAAGAGATATTATTGGTCAAA
GTAGGGTTAAGAATATGAGGTTAAATGGCTCTGAGGTTAACCTAATGGCC
CTTAAAGATGGCCCGAAATTGGTATTAAATGTGAggttaaagcataaaaa
aatgatttggtTTTACTATTTAATGATTGGGCAACAAGATAAGGCTGGAA
AAATGAGGTCAATATTTCAagtagggtgtaaaatttgaggt
Run BLAST on NCBI

transcript from alignment at sc0004414:851..1241

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043632 ID=TCONS_00043632|Name=TCONS_00043632|organism=Clytia hemisphaerica|type=transcript|length=391bp|location=Sequence derived from alignment at sc0004414:851..1241 (Clytia hemisphaerica)
acctcaaattttacaccctactTGAAATATTGACCTCATTTTTCCAGCCT
TATCTTGTTGCCCAATCATTAAATAGTAAAaccaaatcatttttttatgc
tttaaccTCACATTTAATACCAATTTCGGGCCATCTTTAAGGGCCATTAG
GTTAACCTCAGAGCCATTTAACCTCATATTCTTAACCCTACTTTGACCAA
TAATATCTCTTTAAATTCAACACTTAACCTCTATAATGTATATATCATTG
TGATCCTGAATAAATTTTGCGTTAGCATGTAAAGTAgcaaataaaaataa
gttaacctcatttatttatcctttgttaaagacaaaaaagttcttttgaa
aaagttaggcGATTTTTGGGGGTTTTGACTTGAGATGGTcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027316XLOC_027316Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043632-exon-sc0004414-1491911889:851..1241TCONS_00043632-exon-sc0004414-1491911889:851..1241Clytia hemisphaericaexon
TCONS_00043632-exon-sc0004414-1510915933:851..1241TCONS_00043632-exon-sc0004414-1510915933:851..1241Clytia hemisphaericaexon
TCONS_00043632-exon-sc0004414-1575043694:851..1241TCONS_00043632-exon-sc0004414-1575043694:851..1241Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004414supercontigsc0004414:851..1241 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.53412	3.54291	4.66585	3.69492	3.68029	0.623188	0.301783	1.40775	1.31413	2.20894	1.57994	1.66233	2.85216	4.03908	1.41274	1.26851	0.585341	1.19991	2.2794	1.51787	3.20402	4.0537	1.9798	1.62559	0	0.419928	2.13833	1.71156	0.582122	1.32262
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043632 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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