TCONS_00043616 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043616
Unique NameTCONS_00043616
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043616 ID=TCONS_00043616|Name=TCONS_00043616|organism=Clytia hemisphaerica|type=transcript|length=140bp
CAAAAGAACTGGGTCTTCCTGGGTCCTCACTGACACTTCTCAACAGATGG
ATGTGTGTCTCTTCTTGCAACGAATGTTTCTTCGTCATCCCAGTGAAACT
CTTGGAGATTTCTGGCGAATAATTCAACGAGTTGTTAGCC
Run BLAST on NCBI

transcript from alignment at sc0004395:636..775

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043616 ID=TCONS_00043616|Name=TCONS_00043616|organism=Clytia hemisphaerica|type=transcript|length=140bp|location=Sequence derived from alignment at sc0004395:636..775 (Clytia hemisphaerica)
GGCTAACAACTCGTTGAATTATTCGCCAGAAATCTCCAAGAGTTTCACTG
GGATGACGAAGAAACATTCGTTGCAAGAAGAGACACACATCCATCTGTTG
AGAAGTGTCAGTGAGGACCCAGGAAGACCCAGTTCTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027302XLOC_027302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043616-exon-sc0004395-1491911889:636..775TCONS_00043616-exon-sc0004395-1491911889:636..775Clytia hemisphaericaexon
TCONS_00043616-exon-sc0004395-1510915933:636..775TCONS_00043616-exon-sc0004395-1510915933:636..775Clytia hemisphaericaexon
TCONS_00043616-exon-sc0004395-1575043694:636..775TCONS_00043616-exon-sc0004395-1575043694:636..775Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004395supercontigsc0004395:636..775 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043616 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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