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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043603 ID=TCONS_00043603|Name=TCONS_00043603|organism=Clytia hemisphaerica|type=transcript|length=264bp
gttaaaattctttaaaaagaccACAGAATTGTAAAAGGATTCCCAATTCA
AGATGCTGACGTGTATGTGTACCTGTATGAGAACATTTTGAGCAAGAACA
ATAACTTCGAAATTTTAGAGAATTGTATGGCTTGATTATGGATTCCTGGA
CTTTCAATCAAAGTATCAAAGATTCCTACTCAGAACTGAATTATGACTGT
TATGTAAAAACTTTTACCCAGACCACGTTGGATATGTAGTCAAGTTGAAG
TTGTACGTTGTTCN Run BLAST on NCBI transcript from alignment at sc0004385:1614..3506+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043603 ID=TCONS_00043603|Name=TCONS_00043603|organism=Clytia hemisphaerica|type=transcript|length=1893bp|location=Sequence derived from alignment at sc0004385:1614..3506+ (Clytia hemisphaerica)
gttaaaattctttaaaaagaccACAGAATTGTAAAAGGTGAGTTTGttaa
atgattttctttccATCATAaagcttttataagaaatgaAAGTGTTACAG
AGTCATTTTCTTTCCTGGTGGTAAGTTGCCCTCTAAGAAAGGCTTCCCTT
TTTATGCTTTTTATCAGGCCTTGATAATGATGCTGAAACTTTACACTTCC
CCACTCTGTgacgctgtggtatagtggacatTGACCGGCGACCGTAGTAC
aatggtagagcatccggctacggttcgcaaggttgtgggttcaaccccca
gccgggtcataccaaagatttccaaaatggtacttgatgcctctctgctt
gatgctcggcaactaagagaaggatcaagggtaagtggagaacaTCCAGG
GAGatagagtggcgccctcccctaccttcgggtagatagctatcgaaaga
ggagccttcgggtcgccttcgactgcggtcgcagacttacttacttatag
tCCTCAATTGAATGacttgtctggtcattaaaatacagttaaatcaaaac
aaaaattgtagaGTAGAGCTGAGAGGGggggagctgcgtagttcatttgt
tttgaaattttgctgctttgattggtcagtcatttgatggctatgcaagt
ttccctcaactgatgcaagttacgCGACTTCACGGTAGTTNTttagttca
aggtgctgacagggcgctaattgaaagcgtctataatTGTGAAAATGGGC
CTTAAAAGCCCCAtgcgactcaaccaaatagataGATATAGACTTCCCTG
GCCTTTGGTTATTTGCTGCATCAATCCTTCACTTTAGTCACTCCAATAGA
TCTTTTCAATAATGCCTCAACCATCTTAAACTAAGCAAATTGTTGGCGGT
CTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCAACAACTGCTA
ACAGCCAATGAGAGATAAGCAAGTTGTTTTGGATAGACTTAGGTATAAAA
TGCTAGGAATAGTTGCTATCTTGCCCATCATTAAAGATTATAGATGTATT
ATTAATACCAACAATCACAAAAAATTTGAACGTGCATGTAGTTTTCACCT
CCCTGTCCAAAATACCTAGTGAAAACGCTTTAAGTAAGGTTAACctaatc
tattttgaagaccgttccaaaaaaagtttgtttacattcactCAACTTTA
GTAAAGTAAAGTTTTTACATTGCACGTTCAACGTTTTCTTGAATTGCCAT
TACGTTAGTATTATTTAAGTTAGTATTGATAGTGAGGGTATCAGAGTGGG
ATTGCCTGGAAGACTTTTGCTTGTGGATACACAGCTAACACTGGTGACGT
AATCTAACAAAACTTCAGCACTGTAGTGTTGTGGGCTTTGTTAGATCTGT
GACAGAGTGAAAGTCAAATaccatagtttttgaaattttctttcttttct
ttttatacctATTCAGGATTCCCAATTCAAGATGCTGACGTGTATGTGTA
CCTGTATGAGAACATTTTGAGCAAGAACAATAACTTCGAAATTTTAGAGA
ATTGTATGGCTTGATTATGGATTCCTGGACTTTCAATCAAAGTATCAAAG
ATTCCTACTCAGAACTGAATTATGACTGTTATGTAAAAACTTTTACCCAG
ACCACGTTGGATATGTAGTCAAGTTGAAGTTGTACGTTGTTCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043603-exon-sc0004385-1491911889:1614..1650 | TCONS_00043603-exon-sc0004385-1491911889:1614..1650 | Clytia hemisphaerica | exon |
| TCONS_00043603-exon-sc0004385-1510915933:1614..1650 | TCONS_00043603-exon-sc0004385-1510915933:1614..1650 | Clytia hemisphaerica | exon |
| TCONS_00043603-exon-sc0004385-1575043694:1614..1650 | TCONS_00043603-exon-sc0004385-1575043694:1614..1650 | Clytia hemisphaerica | exon |
| TCONS_00043603-exon-sc0004385-1491911889:3280..3506 | TCONS_00043603-exon-sc0004385-1491911889:3280..3506 | Clytia hemisphaerica | exon |
| TCONS_00043603-exon-sc0004385-1510915933:3280..3506 | TCONS_00043603-exon-sc0004385-1510915933:3280..3506 | Clytia hemisphaerica | exon |
| TCONS_00043603-exon-sc0004385-1575043694:3280..3506 | TCONS_00043603-exon-sc0004385-1575043694:3280..3506 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004385 | supercontig | sc0004385:1614..3506 + |
Blast
The following BLAST results are available for this feature:
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