TCONS_00043512 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043512
Unique NameTCONS_00043512
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043512 ID=TCONS_00043512|Name=TCONS_00043512|organism=Clytia hemisphaerica|type=transcript|length=159bp
NNTCGCAATCAAGATATCGTTTTTTAACACTTCGAATAGCAATCATACTG
GAAACGTTTGGAATGATTATCACAAAGATGCCAGAAAGGAAGGACGGAAg
agaaaaaacatcaaatttttgatttcattacgTTTAATTTATACTGATTG
TAGATTTTC
Run BLAST on NCBI

transcript from alignment at sc0004306:3864..4022

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043512 ID=TCONS_00043512|Name=TCONS_00043512|organism=Clytia hemisphaerica|type=transcript|length=159bp|location=Sequence derived from alignment at sc0004306:3864..4022 (Clytia hemisphaerica)
GAAAATCTACAATCAGTATAAATTAAAcgtaatgaaatcaaaaatttgat
gttttttctcTTCCGTCCTTCCTTTCTGGCATCTTTGTGATAATCATTCC
AAACGTTTCCAGTATGATTGCTATTCGAAGTGTTAAAAAACGATATCTTG
ATTGCGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027202XLOC_027202Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043512-exon-sc0004306-1491911889:3864..4022TCONS_00043512-exon-sc0004306-1491911889:3864..4022Clytia hemisphaericaexon
TCONS_00043512-exon-sc0004306-1510915933:3864..4022TCONS_00043512-exon-sc0004306-1510915933:3864..4022Clytia hemisphaericaexon
TCONS_00043512-exon-sc0004306-1575043694:3864..4022TCONS_00043512-exon-sc0004306-1575043694:3864..4022Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004306supercontigsc0004306:3864..4022 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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