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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043491 ID=TCONS_00043491|Name=TCONS_00043491|organism=Clytia hemisphaerica|type=transcript|length=670bp
TCAACATGTTTCAGAATTTGCGTAAGTTTTATTCGTCGATCGTTATATAA
GATATAATTTTAGCATGTTTCAGCATTTGCGTAAGTTTTAATCGTCGATT
GTTATGAGATATTGGTCTTGCTGGTTGAGCCACTTTCTGAAGGGGTGGTC
AGGGTGGTCAACTGGCTTTAAGCTCCAGATGACAATACGTATAAAAAGCA
tgacaaattttaaaataatcattcaaacttgaaacttgaaacAAGCAAGA
AGAATCATTAGcaaaaattgctcaaaacttaatacaataaaaatgaactt
aGTCATTGTCTTAGCAGGGATCGTTGCAGTATGCAGTGGATTATCAGCAC
CTGATAACCCATGTCCAAACACTTTATGTAAAGGAAAATCTGAGGGAAAC
TTTGCTTATGTCAACCCAACCAACAACAAACTCGTGAAGAACCTCTTCGT
CCAATGTGTCGAAGGAAATGCATATTGTCAAGCTTGTTGGCCACTCAGTT
TGGAATTCAGTCCACGATGCAACCAATGTTTGTATCGTTCAAATGATGAA
TGTGTCAAAACTGTTCCATTCTAACCAGCCACCACTTTCCAATGCCCAGA
CAAATGTCCCAACCGTGGACCAAAATTCACCGGAAAAATTGCTGACCCAG
CTGAAAAACGACAATACGTN Run BLAST on NCBI transcript from alignment at sc0004288:2729..3660- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043491 ID=TCONS_00043491|Name=TCONS_00043491|organism=Clytia hemisphaerica|type=transcript|length=932bp|location=Sequence derived from alignment at sc0004288:2729..3660- (Clytia hemisphaerica)
TCAACATGTTTCAGAATTTGCGTAAGTTTTATTCGTCGATCGTTATATAA
GATATAATTTTAGCATGTTTCAGCATTTGCGTAAGTTTTAATCGTCGATT
GTTATGAGATATTGGTCTTGCTGGTTGAGCCACTTTCTGAAGGGGTGGTC
AGGGTGGTCAACTGGCTTTAAGCTCCAGATGACAATACGTATAAAAAGCA
TGACAAATTTTAAAATAATCATTCAAACTTGAAACTTGAAACAAGCAAGA
AGAATCATTAGCAAAAATTGCTCAAAACTTAATACAATAAAAATGAACTT
AGTCATTGTCTTAGCAGGGATCGTTGCAGGTATGTCTTTTAGATTTTAGT
CTAAATAAGATTAGGTTTTTTCTTGTCAGGGTTACCACCGAACTGTCTTT
CATAGCTTTTTAACCCACATTTAGGGTGATGAAGTTTACTCTTCCTTAAC
TTAACCATTTTATGTTCCTAAAAAAGTCTACTCTAACTCGTGCATAAGAA
AATTGGACAAAATTAATATACCTGGTCCCTAAAGTTGTTGAAATGACTAA
AACCGAAAATAAGTGTAGCAAAAGTGTTTTTTTTATTCCAGTATGCAGTG
GATTATCAGCACCTGATAACCCATGTCCAAACACTTTATGTAAAGGAAAA
TCTGAGGGAAACTTTGCTTATGTCAACCCAACCAACAACAAACTCGTGAA
GAACCTCTTCGTCCAATGTGTCGAAGGAAATGCATATTGTCAAGCTTGTT
GGCCACTCAGTTTGGAATTCAGTCCACGATGCAACCAATGTTTGTATCGT
TCAAATGATGAATGTGTCAAAACTGTTCCATTCTAACCAGCCACCACTTT
CCAATGCCCAGACAAATGTCCCAACCGTGGACCAAAATTCACCGGAAAAA
TTGCTGACCCAGCTGAAAAACGACAATACGTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043491-exon-sc0004288-1575043694:3332..3660 | TCONS_00043491-exon-sc0004288-1575043694:3332..3660 | Clytia hemisphaerica | exon |
| TCONS_00043491-exon-sc0004288-1575043694:2729..3069 | TCONS_00043491-exon-sc0004288-1575043694:2729..3069 | Clytia hemisphaerica | exon |
| TCONS_00043491-exon-sc0004288-1510915933:3332..3660 | TCONS_00043491-exon-sc0004288-1510915933:3332..3660 | Clytia hemisphaerica | exon |
| TCONS_00043491-exon-sc0004288-1510915933:2729..3069 | TCONS_00043491-exon-sc0004288-1510915933:2729..3069 | Clytia hemisphaerica | exon |
| TCONS_00043491-exon-sc0004288-1491911889:3332..3660 | TCONS_00043491-exon-sc0004288-1491911889:3332..3660 | Clytia hemisphaerica | exon |
| TCONS_00043491-exon-sc0004288-1491911889:2729..3069 | TCONS_00043491-exon-sc0004288-1491911889:2729..3069 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004288 | supercontig | sc0004288:2729..3660 - |
Blast
The following BLAST results are available for this feature:
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