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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043474 ID=TCONS_00043474|Name=TCONS_00043474|organism=Clytia hemisphaerica|type=transcript|length=1111bp
ATCCACAGACTTTTGAGCGACAATCTCTTTTTCTAGTTTCAAGCTTAACA
AAATCTACCGTACCACGGATCTTCCACAGTTTCATTCTTTATTTAGTGAG
CCGCCACCGTACCAATGTTACCGATTGTTACCATTATGAGCTGTTCAGGG
AGAGCGTGTTGCTCGAGAgtcgtgaagaagaaaataagaaacatcTCTTT
TATTAAAGTTaacaatttataaaataatatacgttacgaaataaatacaa
cattaaaaaaagtggccaaaaataaaaatgaggccATTGATCATTACAAT
CAATATAGACTGTAACTTCGttggtctttcttttctttatgggCGTTGTT
TTCATTCTCTCACGCACATACACCACTGTCTCTATTgccgccccggtgga
gctttttccTTCAGTAgtgtggatgaaaatttctatctaatCGTGGTATC
CAGACGATTTTCAGCTAAGTTTTCTAGTAGTGGGGCGGGGGGCTCCACCG
GATCTCTGACACAAGGGTATTCTCCAGAGAGTTTCAATCATATTCTGGCC
CTCGCCAATGAATGTGTATCATTATGATATTACTACAACGTttgaaaatg
tggaaaatacacGTCTCACCTGGATATATGATCGCAATTGTGttcccata
aaaaatgaaaactgaaataaaaaagaaaaagaagaaacggcGAGAGAAGA
ATTGTTGTAATTCATCCTATCTTNATGATCGCAATTGTGttcccataaaa
aatgaaaactgaaataaaaaagaaaaagaagaaacggcGAGAGAAGAATT
GTTGTAATTCATCCTATCTTGACCACTGGAGAACTAAAAATAAGTATGGA
GTGGCGGGATCGGGATTCTGAAACACAGTTATCCCACAATACCCGTATTC
TAAGTTTCGTATGTTCTGCATTCgaattatctgatattccgatggcggat
tggcggccgcccacgctaaagctctaaagggagcgggccgatttcccatc
ggagaggaNTCGCTACAGTCTCACGCCAGCATAAGAAGGAACGATTCTTg
ttttccaaatcaaaatacaaagaCAATAAAGAAGGATTACCTGGTATATC
TTATTGAATTT Run BLAST on NCBI transcript from alignment at sc0004272:805..1915 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043474 ID=TCONS_00043474|Name=TCONS_00043474|organism=Clytia hemisphaerica|type=transcript|length=1111bp|location=Sequence derived from alignment at sc0004272:805..1915 (Clytia hemisphaerica)
AAATTCAATAAGATATACCAGGTAATCCTTCTTTATTGtctttgtatttt
gatttggaaaacAAGAATCGTTCCTTCTTATGCTGGCGTGAGACTGTAGC
GANtcctctccgatgggaaatcggcccgctccctttagagctttagcgtg
ggcggccgccaatccgccatcggaatatcagataattcGAATGCAGAACA
TACGAAACTTAGAATACGGGTATTGTGGGATAACTGTGTTTCAGAATCCC
GATCCCGCCACTCCATACTTATTTTTAGTTCTCCAGTGGTCAAGATAGGA
TGAATTACAACAATTCTTCTCTCgccgtttcttctttttcttttttattt
cagttttcattttttatgggaaCACAATTGCGATCATNAAGATAGGATGA
ATTACAACAATTCTTCTCTCgccgtttcttctttttcttttttatttcag
ttttcattttttatgggaaCACAATTGCGATCATATATCCAGGTGAGACg
tgtattttccacattttcaaACGTTGTAGTAATATCATAATGATACACAT
TCATTGGCGAGGGCCAGAATATGATTGAAACTCTCTGGAGAATACCCTTG
TGTCAGAGATCCGGTGGAGCCCCCCGCCCCACTACTAGAAAACTTAGCTG
AAAATCGTCTGGATACCACGattagatagaaattttcatccacacTACTG
AAggaaaaagctccaccggggcggcAATAGAGACAGTGGTGTATGTGCGT
GAGAGAATGAAAACAACGcccataaagaaaagaaagaccaaCGAAGTTAC
AGTCTATATTGATTGTAATGATCAATggcctcatttttatttttggccac
tttttttaatgttgtatttatttcgtaacgtatattattttataaattgt
tAACTTTAATAAAAGAgatgtttcttattttcttcttcacgacTCTCGAG
CAACACGCTCTCCCTGAACAGCTCATAATGGTAACAATCGGTAACATTGG
TACGGTGGCGGCTCACTAAATAAAGAATGAAACTGTGGAAGATCCGTGGT
ACGGTAGATTTTGTTAAGCTTGAAACTAGAAAAAGAGATTGTCGCTCAAA
AGTCTGTGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043474-exon-sc0004272-1491911889:805..1915 | TCONS_00043474-exon-sc0004272-1491911889:805..1915 | Clytia hemisphaerica | exon |
| TCONS_00043474-exon-sc0004272-1510915933:805..1915 | TCONS_00043474-exon-sc0004272-1510915933:805..1915 | Clytia hemisphaerica | exon |
| TCONS_00043474-exon-sc0004272-1575043694:805..1915 | TCONS_00043474-exon-sc0004272-1575043694:805..1915 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004272 | supercontig | sc0004272:805..1915 . |
Blast
The following BLAST results are available for this feature:
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