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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043429 ID=TCONS_00043429|Name=TCONS_00043429|organism=Clytia hemisphaerica|type=transcript|length=1616bp
GGGGAATTAAAACCTTTGATTATTATTGATTTATATCCAATTACATTGCA
TCAATCATATTGAGCATGAGAATAGTTATTTGTGGAAATGACGGGAAAGA
AAGCATACGATCATAATGTCAAGGATTTTTCATCAAGTAATCGAGGAAGA
AATGCCTGATTTTAGATATGTTCTACACTACATTGTCGACATAGAGGTAC
AAGATGGTGACATAATCATAATGTCATTTAGCATTTACTCTATCGAACTG
ACTGCCATCGATGATCAATGTGGGTATGAAGTGGATACTGAGAGGAGAGG
CGAATATTTCACCCATGCCATAACAACGCTGATTGACTCATGGACGTATC
AACATCAACCCAGGGGAGATTGAATTGGTAAAAACGGCTATTTTTATAGC
CacaaatatattaaaaaactaTCAATACAATGGTACATACTTCCCCAAAA
ACATTGAAACTATACCTCTTTCGGCACTTTTTTGTCCACCTATATATCTG
AGCATCTAAGGCTAAGAACATTcttaacaaaaacaatatcATTTATGTGA
CATAGAACATCGCTGAGTCATTTACCTAAAACCGCTTTCTTTTCGTTCAA
ATTTAAGTCCCAAATCCCCTATggtatgcttattaaaaaaagactGTATT
CTTATGTAAAAAAATACCTGGATCGTAAATTAATCCCTTGATCAGTATGC
CAGTGATGTGTTTAAGCTAAACTTAATGAAGGTCAGCCTAAGTAAGTGTC
AAAAGCGAATAGAACTGAAAAATTAAACTGTTTTAGATGTCGTGATCGAA
ACGCTCTGGAAGTTAAGTAGCTGGAATTTAAGGTTTGATAATGGTCGAAA
TGTTTAAGAATGATGAGAGAGGAATAATTCTGAGGGTAATCGGACGATAT
CTAAATAATGTGACATAAGGGAATTAGAAACTGAATAAAGTAAACAAGTA
TATATTTGAATGGAgcgaaatttattgaaatttgaacGAAGTGAATTTGA
AGTGAAGACCGTGTCGTGGACGTTGGTCTGTGACGAAATCCTAGTTTTAC
CGGAGCAAAACATGATCTTCAGATGTAGGAAGGGGTTACGTAGTTAGCTA
ATCTGTACCCGAGATACATCCCATATGGCCTAGTCCCTGGCATAAGGGAA
AACCAAGCTGGGACTTGGAAGGTCCAAAGCGTCTTGTGGTGATCATCCGA
TGTTGGACCACATCTGaaatagaaaaagaagaaaacagcaAACGGAGGAC
AGACCTAAAACTGAGAAAAATTTGCCGGGAAGGGCGGAAAGGTAAAATTA
GCTGTTTACGGTTGAGAGGTTGATgagaaatgaatgaatgaatttaaaGC
TACGAACGCAGGCAGTATAAAACCATAGGGGTCTGGATCTACCCGGGTAC
AAGAATTTACTGATGGCGAGATTAATATTAGATAAATTTGCCGTCCCCAC
TGGATTTATTGgattgaaaacaatggaaataaaTATCCCAGTTATAAAAC
TAAAGGGCTTTTTAATCCCCACTGGGATATTTGTTCTCAATTTTATCTCC
ACTGGCCATGAAATTTCCGCCAGGTCAGTGAGACAGAGATGTATAATTTA
ACATCACTCAGCATGA Run BLAST on NCBI transcript from alignment at sc0004213:5818..7433 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043429 ID=TCONS_00043429|Name=TCONS_00043429|organism=Clytia hemisphaerica|type=transcript|length=1616bp|location=Sequence derived from alignment at sc0004213:5818..7433 (Clytia hemisphaerica)
TCATGCTGAGTGATGTTAAATTATACATCTCTGTCTCACTGACCTGGCGG
AAATTTCATGGCCAGTGGAGATAAAATTGAGAACAAATATCCCAGTGGGG
ATTAAAAAGCCCTTTAGTTTTATAACTGGGATAtttatttccattgtttt
caatcCAATAAATCCAGTGGGGACGGCAAATTTATCTAATATTAATCTCG
CCATCAGTAAATTCTTGTACCCGGGTAGATCCAGACCCCTATGGTTTTAT
ACTGCCTGCGTTCGTAGCtttaaattcattcattcatttctcATCAACCT
CTCAACCGTAAACAGCTAATTTTACCTTTCCGCCCTTCCCGGCAAATTTT
TCTCAGTTTTAGGTCTGTCCTCCGTTtgctgttttcttctttttctattt
CAGATGTGGTCCAACATCGGATGATCACCACAAGACGCTTTGGACCTTCC
AAGTCCCAGCTTGGTTTTCCCTTATGCCAGGGACTAGGCCATATGGGATG
TATCTCGGGTACAGATTAGCTAACTACGTAACCCCTTCCTACATCTGAAG
ATCATGTTTTGCTCCGGTAAAACTAGGATTTCGTCACAGACCAACGTCCA
CGACACGGTCTTCACTTCAAATTCACTTCgttcaaatttcaataaatttc
gcTCCATTCAAATATATACTTGTTTACTTTATTCAGTTTCTAATTCCCTT
ATGTCACATTATTTAGATATCGTCCGATTACCCTCAGAATTATTCCTCTC
TCATCATTCTTAAACATTTCGACCATTATCAAACCTTAAATTCCAGCTAC
TTAACTTCCAGAGCGTTTCGATCACGACATCTAAAACAGTTTAATTTTTC
AGTTCTATTCGCTTTTGACACTTACTTAGGCTGACCTTCATTAAGTTTAG
CTTAAACACATCACTGGCATACTGATCAAGGGATTAATTTACGATCCAGG
TATTTTTTTACATAAGAATACagtctttttttaataagcataccATAGGG
GATTTGGGACTTAAATTTGAACGAAAAGAAAGCGGTTTTAGGTAAATGAC
TCAGCGATGTTCTATGTCACATAAATgatattgtttttgttaagAATGTT
CTTAGCCTTAGATGCTCAGATATATAGGTGGACAAAAAAGTGCCGAAAGA
GGTATAGTTTCAATGTTTTTGGGGAAGTATGTACCATTGTATTGAtagtt
ttttaatatatttgtGGCTATAAAAATAGCCGTTTTTACCAATTCAATCT
CCCCTGGGTTGATGTTGATACGTCCATGAGTCAATCAGCGTTGTTATGGC
ATGGGTGAAATATTCGCCTCTCCTCTCAGTATCCACTTCATACCCACATT
GATCATCGATGGCAGTCAGTTCGATAGAGTAAATGCTAAATGACATTATG
ATTATGTCACCATCTTGTACCTCTATGTCGACAATGTAGTGTAGAACATA
TCTAAAATCAGGCATTTCTTCCTCGATTACTTGATGAAAAATCCTTGACA
TTATGATCGTATGCTTTCTTTCCCGTCATTTCCACAAATAACTATTCTCA
TGCTCAATATGATTGATGCAATGTAATTGGATATAAATCAATAATAATCA
AAGGTTTTAATTCCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043429-exon-sc0004213-1491911889:5818..7433 | TCONS_00043429-exon-sc0004213-1491911889:5818..7433 | Clytia hemisphaerica | exon |
| TCONS_00043429-exon-sc0004213-1510915933:5818..7433 | TCONS_00043429-exon-sc0004213-1510915933:5818..7433 | Clytia hemisphaerica | exon |
| TCONS_00043429-exon-sc0004213-1575043694:5818..7433 | TCONS_00043429-exon-sc0004213-1575043694:5818..7433 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004213 | supercontig | sc0004213:5818..7433 . |
Blast
The following BLAST results are available for this feature:
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