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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043368 ID=TCONS_00043368|Name=TCONS_00043368|organism=Clytia hemisphaerica|type=transcript|length=1150bp
CTTCTTGTTTAAAATATAAAGGAGcgaatatcaaaacaaaagtgtCTGAC
AAGTCTCATCGCAACACTGTGGTCAAAATGCCCTGAACCAAGCAATAATC
ATTCACTCCCAGTTGCCCTAAAAACTAGCCATTGAAAATCATCGCAACGC
AGCTGAATTGACCATCAAGCAAACACCCTGTAGCAACTCTTAAAGTAGCC
TAAGCTCAGTCTAAATTTCTTTCTAAATTAAACTCTCTAAAATATCCTTG
AAAAGAGAgacgaaaaatggaaaaatgaataAGGAACAGAGAAGATCTTC
AATTGACCAACTAACCAATGTCTGCCACAATAAGAACAGTACAACGATAT
GCAAGTTCACAAGAAAAATTAATCCCCCAGAAAGGTGGAATTCTCCCGAG
TTCTCCTCACTTTGCATCAAAATCAATGACATCGAAGAGTGAAAATCATT
AACAAAATAATTCAGTCTAAACAGTATTGATAAAACGTTTCTGGAACGAT
ATAAGTGATCCAATAACAATATTTAAACTGTagagaaaattatgaaaata
ttacTCCTCTtcaaattttatgttcaattgaaattaaaatgacaAACTCC
TAAGTGTTTGTCAATGATTTCAAACTGGATACTAATGACCAGCAAGATTG
AGGAGGGGATATGGGTAACATGAGAGACTTTACTACAACATTAGAAAATG
AATGGGCATGACCAAACCTTCTTCCGACAAAGATCTTTAACTCATCCAGG
TGACAGTGAGAGTGATATAGTGAAAAATTATCAGGAAAGTTCAGCAGATC
ACAACAAAAGATAAGTGGTGACAAAGAGCTCATTTCAACAATCAAAATGG
TCCTAGCAAAGAGACTGCTACTAAATCATGAAGGGTACAAAACATCATCT
AAATGACTTGAATACATATAAAAGCTGTGTTCGCATCTggagaaaattaa
ttttcatgaACTTATTTTAGCGAGTCAAGgtgattattttttgatttaac
cctttaagtgccacggtcattctttttctaaatgcgcggacctgcctgaa
tgatagaaagatgcccaatggtaaaacttcaaattaattcgctggTAGAC
GGAAtcaagtaaaacagggccaaatttggaggttcttggatcacgcGTTG Run BLAST on NCBI transcript from alignment at sc0004164:3741..4890 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043368 ID=TCONS_00043368|Name=TCONS_00043368|organism=Clytia hemisphaerica|type=transcript|length=1150bp|location=Sequence derived from alignment at sc0004164:3741..4890 (Clytia hemisphaerica)
CAACgcgtgatccaagaacctccaaatttggccctgttttacttgaTTCC
GTCTAccagcgaattaatttgaagttttaccattgggcatctttctatca
ttcaggcaggtccgcgcatttagaaaaagaatgaccgtggcacttaaagg
gttaaatcaaaaaataatcacCTTGACTCGCTAAAATAAGTtcatgaaaa
ttaattttctccAGATGCGAACACAGCTTTTATATGTATTCAAGTCATTT
AGATGATGTTTTGTACCCTTCATGATTTAGTAGCAGTCTCTTTGCTAGGA
CCATTTTGATTGTTGAAATGAGCTCTTTGTCACCACTTATCTTTTGTTGT
GATCTGCTGAACTTTCCTGATAATTTTTCACTATATCACTCTCACTGTCA
CCTGGATGAGTTAAAGATCTTTGTCGGAAGAAGGTTTGGTCATGCCCATT
CATTTTCTAATGTTGTAGTAAAGTCTCTCATGTTACCCATATCCCCTCCT
CAATCTTGCTGGTCATTAGTATCCAGTTTGAAATCATTGACAAACACTTA
GGAGTTtgtcattttaatttcaattgaacataaaatttgaAGAGGAgtaa
tattttcataattttctctACAGTTTAAATATTGTTATTGGATCACTTAT
ATCGTTCCAGAAACGTTTTATCAATACTGTTTAGACTGAATTATTTTGTT
AATGATTTTCACTCTTCGATGTCATTGATTTTGATGCAAAGTGAGGAGAA
CTCGGGAGAATTCCACCTTTCTGGGGGATTAATTTTTCTTGTGAACTTGC
ATATCGTTGTACTGTTCTTATTGTGGCAGACATTGGTTAGTTGGTCAATT
GAAGATCTTCTCTGTTCCTtattcatttttccatttttcgtcTCTCTTTT
CAAGGATATTTTAGAGAGTTTAATTTAGAAAGAAATTTAGACTGAGCTTA
GGCTACTTTAAGAGTTGCTACAGGGTGTTTGCTTGATGGTCAATTCAGCT
GCGTTGCGATGATTTTCAATGGCTAGTTTTTAGGGCAACTGGGAGTGAAT
GATTATTGCTTGGTTCAGGGCATTTTGACCACAGTGTTGCGATGAGACTT
GTCAGacacttttgttttgatattcgCTCCTTTATATTTTAAACAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043368-exon-sc0004164-1491911889:3741..4890 | TCONS_00043368-exon-sc0004164-1491911889:3741..4890 | Clytia hemisphaerica | exon |
| TCONS_00043368-exon-sc0004164-1510915933:3741..4890 | TCONS_00043368-exon-sc0004164-1510915933:3741..4890 | Clytia hemisphaerica | exon |
| TCONS_00043368-exon-sc0004164-1575043694:3741..4890 | TCONS_00043368-exon-sc0004164-1575043694:3741..4890 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004164 | supercontig | sc0004164:3741..4890 . |
Blast
The following BLAST results are available for this feature:
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