TCONS_00043352 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043352
Unique NameTCONS_00043352
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043352 ID=TCONS_00043352|Name=TCONS_00043352|organism=Clytia hemisphaerica|type=transcript|length=176bp
AGCGTAAACTGTATTTCTAATTGAAATTACAACAACTTGATTCAAAATGG
AAATTACAagatttaataaataaatactatttgtcAGCAATAAAATAAAT
ATCGATCACGTCATCATTTGAAAGGTTCATCATTCTTTGAAGGTCCTCCt
gatcaaaaagttttgtaatCGTAGCT
Run BLAST on NCBI

transcript from alignment at sc0004144:5..180

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043352 ID=TCONS_00043352|Name=TCONS_00043352|organism=Clytia hemisphaerica|type=transcript|length=176bp|location=Sequence derived from alignment at sc0004144:5..180 (Clytia hemisphaerica)
AGCTACGattacaaaactttttgatcaGGAGGACCTTCAAAGAATGATGA
ACCTTTCAAATGATGACGTGATCGATATTTATTTTATTGCTgacaaatag
tatttatttattaaatctTGTAATTTCCATTTTGAATCAAGTTGTTGTAA
TTTCAATTAGAAATACAGTTTACGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027057XLOC_027057Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043352-exon-sc0004144-1491911889:5..180TCONS_00043352-exon-sc0004144-1491911889:5..180Clytia hemisphaericaexon
TCONS_00043352-exon-sc0004144-1510915933:5..180TCONS_00043352-exon-sc0004144-1510915933:5..180Clytia hemisphaericaexon
TCONS_00043352-exon-sc0004144-1575043694:5..180TCONS_00043352-exon-sc0004144-1575043694:5..180Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004144supercontigsc0004144:5..180 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043352 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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