TCONS_00043181 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043181
Unique NameTCONS_00043181
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1740

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043181 ID=TCONS_00043181|Name=TCONS_00043181|organism=Clytia hemisphaerica|type=transcript|length=1740bp
CAAAGACAGAGGATTTATACAAATCGTTTTGACTTTTTAAGTTTCTCATG
ACGAATTACGATACAAAATTATGACtatcatattattttttttcgattaa
ATATACTACTCACCTCGAGTTAATAAATCGCAATATCTATTTAGTTGAAA
GGCCATGAAATATCTGCTattatcattttcttctttttcgttttaGGGGG
CTGGTGGTTAGGTTGGGCACCTTTGGTCTCAATATTTGCCACACGGATCA
GTAAAGGTCGAACAATCAAAAGTGTGATCGAAATTGCTTTCATAATCCCA
AGCTTTGTCAATTTCATTTGGTTTGTCGTTGTAGGAGGTGTGTCCATTGA
TATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAAA
CAACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGT
ATTGATGAAGACAAACGATTCTATATGATTATCGCTTTGATGCTTACCTT
ACTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCA
TCTCCAGTAACGGTCTAGAAGAGCCACCATTGATTCAACGTATTTTCTGG
TGCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATT
CACTGATCGTGCTGACGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGT
TCGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGATTATTGAAA
ATGGAACCATATTGGTTTTACAATGAAATCGCTCACTGGGAAATGATTTA
TGGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTG
TTGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAAT
CACCATGGCGACAAGAATGGTAACCATGTTGGTGAAGGACATCCGCCCGT
GTCCGCCCAAACTACAGGAAGTCCACCCTTATCCAACCGAAAACGATTTT
TCGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTT
CTTTTACAAATTCGATACCAAAACATAAATAGTGTTGGCTGGGCTGTTTT
TGTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTACGGCCCTTCGTCGCC
AGTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCAATT
TTCCCGTTGACCGTTGTTCAGATGTATCGACAGGTCATTTTCGGTGAAAG
ATCAATCGAAACTGGTGATACCACGGAAATGAAGAACAACCCATCGACCA
AAACTAACAGAGGACAACGCAATTTAGCCTACATACATGAATCATTTTCG
CCTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTA
ACGTGTATTGCTCTGCAGTTGGTActcaacgttgttttaacattcACACA
ACATTATAAATTTGGATGTTAAAAGGATGTGATTTAAACTTTCGTTGATC
TTTAGATGGATCAATGCAGTTCattcaaacaaatttaaaacgaTATTCCA
TcgtttaaaagaagtttttctattgaaaaatgataaaaattgatACTCGT
CATcacaaatttaaatttagatTTCGGGTATCTCTTCGTCGGGTATAATC
TAAAAACGTGGTTTAGATTCCTTAGAATAATAATTGATCTCGTGTTTCGA
TTTCCGATAAATTCGGTTCCGTTTTTTTCTCGGACACGCT
Run BLAST on NCBI

protein sequence of TCONS_00043181-protein

>TCONS_00043181-protein ID=TCONS_00043181-protein|Name=TCONS_00043181-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MENQAISMRLHCGMNKTTRDALGAPDWLHSLGCIDEDKRFYMIIALMLTL
LYFITSFDSAALVMGTISSNGLEEPPLIQRIFWCITIAACTSALIVYTEF
TDRADVNAFAILAGLPFAVLMCFCAISLWRLLKMEPYWFYNEIAHWEMIY
GHIDDIQILKKVLLAIVAPWYYLGQMSIKISLNHHGDKNGNHVGEGHPPV
SAQTTGSPPLSNRKRFFAYFKFAFPFYLWIVLLLLQIRYQNINSVGWAVF
VGFLVLSSRIRTALRRQYRIQGNVFEDIAIMAIFPLTVVQMYRQVIFGER
SIETGDTTEMKNNPSTKTNRGQRNLAYIHESFSPESPPIYQSGEDFLAA
Run BLAST on NCBI

transcript from alignment at sc0003978:4182..6992+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043181 ID=TCONS_00043181|Name=TCONS_00043181|organism=Clytia hemisphaerica|type=transcript|length=2811bp|location=Sequence derived from alignment at sc0003978:4182..6992+ (Clytia hemisphaerica)
CAAAGACAGAGGATTTATACAAATCGTTTTGACTTTTTAAGTTTCTCATG
ACGAATTACGATACAAAATTATGACtatcatattattttttttcgattaa
ATATACTACTCACCTCGAGTTAATAAATCGCAATATCTATTTAGTTGAAA
GGCCATGAAATATCTGCTattatcattttcttctttttcgttttaGGGGG
CTGGTGGTTAGGTTGGGCACCTTTGGTCTCAATATTTGCCACACGGATCA
GTAAAGGTCGAACAATCAAAAGTGTGATCGAAATTGCTTTCATAATCCCA
AGCTTTGTCAATTTCATTTGGTTTGTCGTTGTAGGAGGTGTGTCCATTGA
TATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAGT
AGGTGGTCTCACGCACTAAGATAGCTcggtttttgaaaagttttagcTAC
GCGGGacttattttacaaaataaGTTGGGACTGAACCTCGAaagtttctc
aaaattttctgatttttctaatTTCGCATAAAATTGCACTCTTGGACTGA
ACtgactttttgtatttttgttttgacgGCCCTACCTAGAACTGTTACAT
GTTTACTTTGGCGGTAAACATTGCTATAAATCCAGCGTtcgtgtgaaaac
cacgcgggtcaTGCAACTTACATAAAAAAGGAGTTCAAAAATACAGCAAG
ATTTCATCGAAATACTATCTATCTTATTTTTACTAGAACAACACGTGATG
CTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGTATTGATGAAGAC
AAACGATTCTATATGGTAATCGAAAAATATGAAGATATCAAGATTATTCT
TCAGATTATCGCTTTGATGCTTACCTTACTGTATTTTATCACGAGTTTCG
ATTCAGCTGCTCTCGTCATGGGCACCATCTCCAGTAACGGTTagtccttt
gttttttttctcatttttgtgaCTATTCCTTGTTCTTTAATTAAACTACA
ACTTTGTATCAAAACCGCGACTGAAAcctgtccattttcctaatgaTAAA
ACGGTTCACAACAGCGAACGAGGGCGGCATGGCCGAAACGAAAGATTTTC
TGGGAAATAGAATTCTATACAAAGCGATGGTATTTTGTACAATCTAccct
tttcgaaattttattcTTATTCTTAAAGGTCTAGAAGAGCCACCATTGAT
TCAACGTATTTTCTGGTGCATCACCATAGCTGCTTGTACTTCAGCTCTTA
TTGTTTATACTGAATTCACTGATCGTGCTGACGTCAATGCTTTTGCTATT
CTGGCTGGCCTTCCGTTCGCAGTTTTGATGTGTTTCTGTGCTATTTCACT
GTGGCGGTGAGTTAATTATCATTAATTGGGAACTCTAGATAAGTCCCCCA
CCCTCCCGAACAGTTAGCTAAAACATTTTCGCATGGGAAATTAAATCAAT
CTAACTAGCTCCTTTTAAAATCAAACCCTTGGTAGGTACCAAGATGAACA
TTCTGTTTGAAAGAATATTCATTAAAGCAAAGGTAACAAATATCAAACAA
GCATATATTTTTTATAGATTATTGAAAATGGAACCATATTGGTTTTACAA
TGAAATCGCTCACTGGGAAATGATTTATGGTCATATTGATGATATTCAAA
TACTGAAAAAAGTCCTGTTAGCAATTGTTGCTCCCTGGTACTACCTAGGG
CAAATGTCAATTAAAATTAGCCTAAATCACCATGGCGACAAGAATGGTAA
CCATGTTGGTGAAGGACATCCGCCCGTGTCCGCCCAAACTACAGGAAGTC
CACCCTTATCCAACCGAAAACGATTTTTCGCGTACTTCAAATTTGCTTTC
CCATTCTACTTATGGATTGTTTTACTTCTTTTACAAATTCGATACCAAAA
CATAAATAGTGTTGGCTGGGCTGTTTTTGTCGGGTTCTTGGTCCTTTCGA
GTCGCATTCGTACGGCCCTTCGTCGCCAGTATCGAATACAAGGAAATGTT
TTCGAAGATATTGCGATCATGGCAATTTTCCCGTTGACCGTTGTTCAGAT
GTATCGACAGGTTACTACAAATTATACTTTCAAATCTTGAATTGAATTTT
TCGTACCCCATCGCATGAGTTTTAGGAAAAAAAGGATCAAAATCTAAATC
AAATTTCATTACAGATGTTATTTGCCATTGCGTAAAGATTTTTTCAATAT
GCAGTTGAATTCCCTTTTCATTTGAAATAACTTTTTCTTTTTTCGAAACT
ACGGTACTCATCGCCTGACCCATGAAGTTTTTGCATTTTCTCGCTTCATT
TCAGGTCATTTTCGGTGAAAGATCAATCGAAACTGGTGATACCACGGAAA
TGAAGAACAACCCATCGACCAAAACTAACAGAGGACAACGCAATTTAGCC
TACATACATGAATCATTTTCGCCTGAATCTCCGCCCATCTATCAATCTGG
TGAAGATTTCTTAGCTGCTTAACGTGTATTGCTCTGCAGTTGGTActcaa
cgttgttttaacattcACACAACATTATAAATTTGGATGTTAAAAGGATG
TGATTTAAACTTTCGTTGATCTTTAGATGGATCAATGCAGTTCattcaaa
caaatttaaaacgaTATTCCATcgtttaaaagaagtttttctattgaaaa
atgataaaaattgatACTCGTCATcacaaatttaaatttagatTTCGGGT
ATCTCTTCGTCGGGTATAATCTAAAAACGTGGTTTAGATTCCTTAGAATA
ATAATTGATCTCGTGTTTCGATTTCCGATAAATTCGGTTCCGTTTTTTTC
TCGGACACGCT

Coding sequence (CDS) from alignment at sc0003978:4182..6992+

>TCONS_00043181 ID=TCONS_00043181|Name=TCONS_00043181|organism=Clytia hemisphaerica|type=CDS|length=6300bp|location=Sequence derived from alignment at sc0003978:4182..6992+ (Clytia hemisphaerica)
ATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAAAC
AACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGTA
TTGATGAAGACAAACGATTCTATATGATTATCGCTTTGATGCTTACCTTA
CTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCAT
CTCCAGTAACGGTCTAGAAGAGCCACCATTGATTCAACGTATTTTCTGGT
GCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTC
ACTGATCGTGCTGACGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTT
CGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGATTATTGAAAA
TGGAACCATATTGGTTTTACAATGAAATCGCTCACTGGGAAATGATTTAT
GGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGT
TGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATC
ACCATGGCGACAAGAATGGTAACCATGTTGGTGAAGGACATCCGCCCGTG
TCCGCCCAAACTACAGGAAGTCCACCCTTATCCAACCGAAAACGATTTTT
CGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTC
TTTTACAAATTCGATACCAAAACATAAATAGTGTTGGCTGGGCTGTTTTT
GTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTACGGCCCTTCGTCGCCA
GTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCAATTT
TCCCGTTGACCGTTGTTCAGATGTATCGACAGGTCATTTTCGGTGAAAGA
TCAATCGAAACTGGTGATACCACGGAAATGAAGAACAACCCATCGACCAA
AACTAACAGAGGACAACGCAATTTAGCCTACATACATGAATCATTTTCGC
CTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAA
ATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAAAC
AACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGTA
TTGATGAAGACAAACGATTCTATATGATTATCGCTTTGATGCTTACCTTA
CTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCAT
CTCCAGTAACGGTCTAGAAGAGCCACCATTGATTCAACGTATTTTCTGGT
GCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTC
ACTGATCGTGCTGACGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTT
CGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGATTATTGAAAA
TGGAACCATATTGGTTTTACAATGAAATCGCTCACTGGGAAATGATTTAT
GGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGT
TGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATC
ACCATGGCGACAAGAATGGTAACCATGTTGGTGAAGGACATCCGCCCGTG
TCCGCCCAAACTACAGGAAGTCCACCCTTATCCAACCGAAAACGATTTTT
CGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTC
TTTTACAAATTCGATACCAAAACATAAATAGTGTTGGCTGGGCTGTTTTT
GTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTACGGCCCTTCGTCGCCA
GTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCAATTT
TCCCGTTGACCGTTGTTCAGATGTATCGACAGGTCATTTTCGGTGAAAGA
TCAATCGAAACTGGTGATACCACGGAAATGAAGAACAACCCATCGACCAA
AACTAACAGAGGACAACGCAATTTAGCCTACATACATGAATCATTTTCGC
CTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAA
ATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAAAC
AACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGTA
TTGATGAAGACAAACGATTCTATATGATTATCGCTTTGATGCTTACCTTA
CTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCAT
CTCCAGTAACGGTCTAGAAGAGCCACCATTGATTCAACGTATTTTCTGGT
GCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTC
ACTGATCGTGCTGACGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTT
CGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGATTATTGAAAA
TGGAACCATATTGGTTTTACAATGAAATCGCTCACTGGGAAATGATTTAT
GGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGT
TGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATC
ACCATGGCGACAAGAATGGTAACCATGTTGGTGAAGGACATCCGCCCGTG
TCCGCCCAAACTACAGGAAGTCCACCCTTATCCAACCGAAAACGATTTTT
CGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTC
TTTTACAAATTCGATACCAAAACATAAATAGTGTTGGCTGGGCTGTTTTT
GTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTACGGCCCTTCGTCGCCA
GTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCAATTT
TCCCGTTGACCGTTGTTCAGATGTATCGACAGGTCATTTTCGGTGAAAGA
TCAATCGAAACTGGTGATACCACGGAAATGAAGAACAACCCATCGACCAA
AACTAACAGAGGACAACGCAATTTAGCCTACATACATGAATCATTTTCGC
CTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAA
ATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAAAC
AACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGTA
TTGATGAAGACAAACGATTCTATATGATTATCGCTTTGATGCTTACCTTA
CTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCAT
CTCCAGTAACGGTCTAGAAGAGCCACCATTGATTCAACGTATTTTCTGGT
GCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTC
ACTGATCGTGCTGACGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTT
CGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGATTATTGAAAA
TGGAACCATATTGGTTTTACAATGAAATCGCTCACTGGGAAATGATTTAT
GGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGT
TGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATC
ACCATGGCGACAAGAATGGTAACCATGTTGGTGAAGGACATCCGCCCGTG
TCCGCCCAAACTACAGGAAGTCCACCCTTATCCAACCGAAAACGATTTTT
CGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTC
TTTTACAAATTCGATACCAAAACATAAATAGTGTTGGCTGGGCTGTTTTT
GTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTACGGCCCTTCGTCGCCA
GTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCAATTT
TCCCGTTGACCGTTGTTCAGATGTATCGACAGGTCATTTTCGGTGAAAGA
TCAATCGAAACTGGTGATACCACGGAAATGAAGAACAACCCATCGACCAA
AACTAACAGAGGACAACGCAATTTAGCCTACATACATGAATCATTTTCGC
CTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAA
ATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAAAC
AACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGTA
TTGATGAAGACAAACGATTCTATATGATTATCGCTTTGATGCTTACCTTA
CTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCAT
CTCCAGTAACGGTCTAGAAGAGCCACCATTGATTCAACGTATTTTCTGGT
GCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTC
ACTGATCGTGCTGACGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTT
CGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGATTATTGAAAA
TGGAACCATATTGGTTTTACAATGAAATCGCTCACTGGGAAATGATTTAT
GGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGT
TGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATC
ACCATGGCGACAAGAATGGTAACCATGTTGGTGAAGGACATCCGCCCGTG
TCCGCCCAAACTACAGGAAGTCCACCCTTATCCAACCGAAAACGATTTTT
CGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTC
TTTTACAAATTCGATACCAAAACATAAATAGTGTTGGCTGGGCTGTTTTT
GTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTACGGCCCTTCGTCGCCA
GTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCAATTT
TCCCGTTGACCGTTGTTCAGATGTATCGACAGGTCATTTTCGGTGAAAGA
TCAATCGAAACTGGTGATACCACGGAAATGAAGAACAACCCATCGACCAA
AACTAACAGAGGACAACGCAATTTAGCCTACATACATGAATCATTTTCGC
CTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAA
ATGGAAAATCAAGCCATTTCAATGAGACTCCATTGCGGCATGAACAAAAC
AACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGTA
TTGATGAAGACAAACGATTCTATATGATTATCGCTTTGATGCTTACCTTA
CTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCAT
CTCCAGTAACGGTCTAGAAGAGCCACCATTGATTCAACGTATTTTCTGGT
GCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTC
ACTGATCGTGCTGACGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTT
CGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGATTATTGAAAA
TGGAACCATATTGGTTTTACAATGAAATCGCTCACTGGGAAATGATTTAT
GGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGT
TGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATC
ACCATGGCGACAAGAATGGTAACCATGTTGGTGAAGGACATCCGCCCGTG
TCCGCCCAAACTACAGGAAGTCCACCCTTATCCAACCGAAAACGATTTTT
CGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTC
TTTTACAAATTCGATACCAAAACATAAATAGTGTTGGCTGGGCTGTTTTT
GTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTACGGCCCTTCGTCGCCA
GTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCAATTT
TCCCGTTGACCGTTGTTCAGATGTATCGACAGGTCATTTTCGGTGAAAGA
TCAATCGAAACTGGTGATACCACGGAAATGAAGAACAACCCATCGACCAA
AACTAACAGAGGACAACGCAATTTAGCCTACATACATGAATCATTTTCGC
CTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026903XLOC_026903Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043181-proteinTCONS_00043181-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043181-exon-sc0003978-1491911889:4182..4579TCONS_00043181-exon-sc0003978-1491911889:4182..4579Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1510915933:4182..4579TCONS_00043181-exon-sc0003978-1510915933:4182..4579Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1575043694:4182..4579TCONS_00043181-exon-sc0003978-1575043694:4182..4579Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1491911889:4918..4996TCONS_00043181-exon-sc0003978-1491911889:4918..4996Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1510915933:4918..4996TCONS_00043181-exon-sc0003978-1510915933:4918..4996Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1575043694:4918..4996TCONS_00043181-exon-sc0003978-1575043694:4918..4996Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1491911889:5036..5120TCONS_00043181-exon-sc0003978-1491911889:5036..5120Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1510915933:5036..5120TCONS_00043181-exon-sc0003978-1510915933:5036..5120Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1575043694:5036..5120TCONS_00043181-exon-sc0003978-1575043694:5036..5120Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1491911889:5360..5537TCONS_00043181-exon-sc0003978-1491911889:5360..5537Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1510915933:5360..5537TCONS_00043181-exon-sc0003978-1510915933:5360..5537Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1575043694:5360..5537TCONS_00043181-exon-sc0003978-1575043694:5360..5537Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1491911889:5749..6241TCONS_00043181-exon-sc0003978-1491911889:5749..6241Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1510915933:5749..6241TCONS_00043181-exon-sc0003978-1510915933:5749..6241Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1575043694:5749..6241TCONS_00043181-exon-sc0003978-1575043694:5749..6241Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1491911889:6486..6992TCONS_00043181-exon-sc0003978-1491911889:6486..6992Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1510915933:6486..6992TCONS_00043181-exon-sc0003978-1510915933:6486..6992Clytia hemisphaericaexon
TCONS_00043181-exon-sc0003978-1575043694:6486..6992TCONS_00043181-exon-sc0003978-1575043694:6486..6992Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003978supercontigsc0003978:4182..6992 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.310997	0.340182	0.701117	0.82379	0.508696	0.0754125	0.246804	0.184326	0.0918243	0	0.0641707	0.190611	12.5164	9.74532	1.889	1.5878	0.520308	0.542913	9.42274	13.5301	1.0846	0.965635	10.8817	14.4071	7.07992	4.42105	1.39707	1.99874	0.644676	1.02084
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000060BCCT_transptr
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043181 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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