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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043180 ID=TCONS_00043180|Name=TCONS_00043180|organism=Clytia hemisphaerica|type=transcript|length=922bp
AGGCAGCAGACCCAAGACCATGTTTTCAAGTGTCAAAGAAAAGTCTGGAT
AGTTaattaaataaatcaataactctcaaTGGATGTTTGCTCTGCTGGTC
CTTACCNCATCGTAAGTCGGGCAGTTGTTTTCACCCTATGTTGTTTTTCC
CTTCCTTTTAATCCCTGGTAACATCCAATGACGTTGATACATTAGCCATT
TCATTATTCTAGCCTACGTACCTTTGGAAGCCTTGGTTGATGATAGCCCT
GGGTTTCATGCGTTATCATCtttcatctttttgtttttaactggGGTTTT
TAACTATCCACCCATGGGTTCATATGTCAAGTCGGGCAGTTGTTTTTCAC
CCCATTTGTTCTCCCTTCCTTAATCCCCGTTGATATATCCATTGGTGTTG
GTTGATACATTGGTAATTATTTCAGCTTAAATGTACCTTTCGGAAATCTA
CTGGTTGGATAGCCCTGGGCTTATGTGCTAGTTTCACCTTTTGTTTTTAA
CTGGGTTTCTCACTATCCACCCATAAGTTCACTTTAAGTTAGGCATTTGT
TTTTCACCACTCTTTTCTTCATCCTATCATTCCTGTTGACGTCCAATGAC
GTCATGATGCATTGGTAATTATTTAGCCTATGAACTTTTGGAGACCTTTG
TGTTGTCATGTTatacttttgtttttaactgGGTTTCTAACTAGCCACCC
ATGGGTTCACCTGTAAATTGGgcagttttttcttttccttcttttttttt
ttttccacttggccttttttgtttgttttcattcTATTATTCCTGGCGAC
GTCCAATGACGTCATGATACACTGGTAATAATCTTAGCCTATGATCCCAT
GCAAACCTACTGGTTGGGTAGCTCTTGGTCTTGTGTCGTCAAGTTTTATT
TTGTCTTAACTGGGTTTCTTAC Run BLAST on NCBI transcript from alignment at sc0003977:7303..8224 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043180 ID=TCONS_00043180|Name=TCONS_00043180|organism=Clytia hemisphaerica|type=transcript|length=922bp|location=Sequence derived from alignment at sc0003977:7303..8224 (Clytia hemisphaerica)
GTAAGAAACCCAGTTAAGACAAAATAAAACTTGACGACACAAGACCAAGA
GCTACCCAACCAGTAGGTTTGCATGGGATCATAGGCTAAGATTATTACCA
GTGTATCATGACGTCATTGGACGTCGCCAGGAATAATAgaatgaaaacaa
acaaaaaaggccaagtggaaaaaaaaaaaaagaaggaaaagaaaaaactg
cCCAATTTACAGGTGAACCCATGGGTGGCTAGTTAGAAACCcagttaaaa
acaaaagtatAACATGACAACACAAAGGTCTCCAAAAGTTCATAGGCTAA
ATAATTACCAATGCATCATGACGTCATTGGACGTCAACAGGAATGATAGG
ATGAAGAAAAGAGTGGTGAAAAACAAATGCCTAACTTAAAGTGAACTTAT
GGGTGGATAGTGAGAAACCCAGTTAAAAACAAAAGGTGAAACTAGCACAT
AAGCCCAGGGCTATCCAACCAGTAGATTTCCGAAAGGTACATTTAAGCTG
AAATAATTACCAATGTATCAACCAACACCAATGGATATATCAACGGGGAT
TAAGGAAGGGAGAACAAATGGGGTGAAAAACAACTGCCCGACTTGACATA
TGAACCCATGGGTGGATAGTTAAAAACCccagttaaaaacaaaaagatga
aaGATGATAACGCATGAAACCCAGGGCTATCATCAACCAAGGCTTCCAAA
GGTACGTAGGCTAGAATAATGAAATGGCTAATGTATCAACGTCATTGGAT
GTTACCAGGGATTAAAAGGAAGGGAAAAACAACATAGGGTGAAAACAACT
GCCCGACTTACGATGNGGTAAGGACCAGCAGAGCAAACATCCAttgagag
ttattgatttatttaattAACTATCCAGACTTTTCTTTGACACTTGAAAA
CATGGTCTTGGGTCTGCTGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043180-exon-sc0003977-1491911889:7303..8224 | TCONS_00043180-exon-sc0003977-1491911889:7303..8224 | Clytia hemisphaerica | exon |
| TCONS_00043180-exon-sc0003977-1510915933:7303..8224 | TCONS_00043180-exon-sc0003977-1510915933:7303..8224 | Clytia hemisphaerica | exon |
| TCONS_00043180-exon-sc0003977-1575043694:7303..8224 | TCONS_00043180-exon-sc0003977-1575043694:7303..8224 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003977 | supercontig | sc0003977:7303..8224 . |
Blast
The following BLAST results are available for this feature:
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