|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042921 ID=TCONS_00042921|Name=TCONS_00042921|organism=Clytia hemisphaerica|type=transcript|length=682bp
tttcagtgaAATAAGTAAAATGCAATCTAGTTTAAAATTAATGTTTGGTC
TGTGAATGGTCTTGGAATGGTGATCGAGCAGATGAAAACGAGATCGTAAC
ATCTGAGTAAAGTTACttttaacttgaaaatcatcatcgtcatcaatGAA
AAATAGATAACCGTCCTTTTCTTTGAAAGATAACAAGAAGCCGAAGCGGA
ATGAAGACTCAGTGACATAACAATAGTCGAATGTTTGTTCGCAATGTTAC
AAAtagccgtttcttccaaaatgaactcgGATTGACAAAGCGCTGCTTCT
ACAAAAACTTACAGCACCAAGGACAGCAACATGCTAATAAAAGGCCCGAT
GCTTGGCCAACGAATGAATGTATTCGCGAAGcaaatttatttcaattata
ACAAGATGGAGAGAAATTCAGCAGCCAATCAAATCCGTCGTTATTTACGT
TCATTTCAACTACCCACTCCGGACAAACTACTATTAATCCGTTCGAGATC
GTATAATACATTCATATCAACGTTATTGAATCCTTGAAACAATAATATTC
ACTTATAACTATCCACTCCGGTTGTTCGACATCGAATCATTCACGGGGAA
TTCACGTTGTTAGATCTTTGAAGCAATATTATCCAACATCCAATCTATGA
AAGCTACCATTGCTGtgtcacagatatcttat Run BLAST on NCBI transcript from alignment at sc0003783:2161..3255- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042921 ID=TCONS_00042921|Name=TCONS_00042921|organism=Clytia hemisphaerica|type=transcript|length=1095bp|location=Sequence derived from alignment at sc0003783:2161..3255- (Clytia hemisphaerica)
TTTCAGTGAAATAAGTAAAATGCAATCTAGTTTAAAATTAATGTTTGGTC
TGTGAATGGTCTTGGAATGGTGATCGAGCAGATGAAAACGAGATCGTAAC
ATCTGAGTAAAGTTACTTTTAACTTGAAAATCATCATCGTCATCAATGAA
AAATAGATAACCGTCCTTTTCTTTGAAAGATAACAAGAAGCCGAAGCGGA
ATGAAGACTCAGTGACATAACAATAGTCGAATGTTTGTTCGCAATGTTAC
AAATAGCCGTTTCTTCCAAAATGAACTCGGATTGACAAAGCGCTGCTTCT
ACAAAAACTTACAGCACCAAGGACAGCAACATGCTAATAAAAGGCCCGAT
GCTTGGCCAACGAATGAATGTATTCGCGAAGCAAATTTATTTCAATTATA
ACAAGGTACGCAATTCAATGATTCAATTCGTTCACCCTTCTACATATTCA
CTTGCCATTGTAGACTAGAACAAAATGAATCATATGGTAATTTCAGAACG
TTATACTGGACTTACCGTGTTNTTATAACAAGGTACGCAATTCAATGATT
CAATTCGTTCACCCTTCTACATATTTACTTGTCATTGTAGATTAGAACTG
GATGGATCATATGGTAATTTCAGAACGTTATAATGGACTTACCGTGTGGT
ATAGAGTCTAGAGAATCATTTACGCATTACGAATCATAGTACTGCTCCAT
TTTTTCTGAATCTGTTTTTCGACACTTGATGCAATTTCCTCGTGTTTCTC
GTATTGGTTGATCTTCAATTTTCAATAGCTTTGCCATGCTTCAGATATGT
ATTTTTTACCCGTTTCAGATGGAGAGAAATTCAGCAGCCAATCAAATCCG
TCGTTATTTACGTTCATTTCAACTACCCACTCCGGACAAACTACTATTAA
TCCGTTCGAGATCGTATAATACATTCATATCAACGTTATTGAATCCTTGA
AACAATAATATTCACTTATAACTATCCACTCCGGTTGTTCGACATCGAAT
CATTCACGGGGAATTCACGTTGTTAGATCTTTGAAGCAATATTATCCAAC
ATCCAATCTATGAAAGCTACCATTGCTGTGTCACAGATATCTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042921-exon-sc0003783-1575043694:2851..3255 | TCONS_00042921-exon-sc0003783-1575043694:2851..3255 | Clytia hemisphaerica | exon |
| TCONS_00042921-exon-sc0003783-1575043694:2161..2437 | TCONS_00042921-exon-sc0003783-1575043694:2161..2437 | Clytia hemisphaerica | exon |
| TCONS_00042921-exon-sc0003783-1510915933:2851..3255 | TCONS_00042921-exon-sc0003783-1510915933:2851..3255 | Clytia hemisphaerica | exon |
| TCONS_00042921-exon-sc0003783-1510915933:2161..2437 | TCONS_00042921-exon-sc0003783-1510915933:2161..2437 | Clytia hemisphaerica | exon |
| TCONS_00042921-exon-sc0003783-1491911889:2851..3255 | TCONS_00042921-exon-sc0003783-1491911889:2851..3255 | Clytia hemisphaerica | exon |
| TCONS_00042921-exon-sc0003783-1491911889:2161..2437 | TCONS_00042921-exon-sc0003783-1491911889:2161..2437 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003783 | supercontig | sc0003783:2161..3255 - |
Blast
The following BLAST results are available for this feature:
|
