TCONS_00042918 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042918
Unique NameTCONS_00042918
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length418

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042918 ID=TCONS_00042918|Name=TCONS_00042918|organism=Clytia hemisphaerica|type=transcript|length=418bp
GTCAAATAGGAGGACTGGAACTAGTGTGAACTAAGTTAGCCAAAGTACTA
AAAATGGCATAAATGGTGAAATATTGGAGAAATTGGTTTGCTTTGTGCTT
TGTATTGGTTATTGTTGCAGTGTGCTATTAATGAccaatagattttattt
tcaaagattgtGTTATGATTTAACTCTCATGGTTAGCTATTGTTTTAGTT
TGCTGCTCAACTTGATGTAATTAGAGGTCAAGTTTTTCCTAAGATCCCAA
AGATTAAACTATATAATTCAGATTGGTTTGATCTCTGAAGTCAAAAGCAA
CAATATCCAATACAAAAGCAGAAGTTcgcaaatttttatttatgtCATTT
TCAGTAGTTTGGCTAACTTGGTTCATAATAGTTCCAATCCTCTGAATTGA
CCAAATGCCTCAATATAT
Run BLAST on NCBI

transcript from alignment at sc0003776:7739..8156

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042918 ID=TCONS_00042918|Name=TCONS_00042918|organism=Clytia hemisphaerica|type=transcript|length=418bp|location=Sequence derived from alignment at sc0003776:7739..8156 (Clytia hemisphaerica)
ATATATTGAGGCATTTGGTCAATTCAGAGGATTGGAACTATTATGAACCA
AGTTAGCCAAACTACTGAAAATGacataaataaaaatttgcgAACTTCTG
CTTTTGTATTGGATATTGTTGCTTTTGACTTCAGAGATCAAACCAATCTG
AATTATATAGTTTAATCTTTGGGATCTTAGGAAAAACTTGACCTCTAATT
ACATCAAGTTGAGCAGCAAACTAAAACAATAGCTAACCATGAGAGTTAAA
TCATAACacaatctttgaaaataaaatctattggTCATTAATAGCACACT
GCAACAATAACCAATACAAAGCACAAAGCAAACCAATTTCTCCAATATTT
CACCATTTATGCCATTTTTAGTACTTTGGCTAACTTAGTTCACACTAGTT
CCAGTCCTCCTATTTGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026685XLOC_026685Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042918-exon-sc0003776-1491911889:7739..8156TCONS_00042918-exon-sc0003776-1491911889:7739..8156Clytia hemisphaericaexon
TCONS_00042918-exon-sc0003776-1510915933:7739..8156TCONS_00042918-exon-sc0003776-1510915933:7739..8156Clytia hemisphaericaexon
TCONS_00042918-exon-sc0003776-1575043694:7739..8156TCONS_00042918-exon-sc0003776-1575043694:7739..8156Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003776supercontigsc0003776:7739..8156 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042918 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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