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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00034769 ID=TCONS_00034769|Name=TCONS_00034769|organism=Clytia hemisphaerica|type=transcript|length=867bp
GGAGAATATGTGCGGTACTTGTTAGAACTATTTTCTTATTTCTTGTAGCT
GTGGATTTCCAGGGATTTTCTCAACAAAGTCTTGGACACCCGTTCTCACT
AGCCCAAGGGCCCCTACAATCTCTGGTACTACTGTTGTTTTCAAATTCCA
CATTTTCTGGGTCTCTATTTCAAGATCTTTGTACTTGCTTAGTTTATCAA
GCATCTTAACTGAAACATTTCTGTCACTGGGGACACTCATATCGATCAGT
AAGCAAGTTCTCTTCTTCCGATCCTTCACTACAATGTCTGGTCTATTAGC
CTTTATCGTTCTGTCTGTGTTGATTGGGAAATCCCACAAGATGGTGACAT
TCTTGGATTCAACTACAGCTGGTGGATGGTGTTCATACCAGAAAGATGCG
TCAGTTTCGACTCCGTAATGCTTACAGATGCACCAGTGAAGGTATTGCCC
AACACGGTCGTGGCGCTTCACATATTCATTTGGAGTCAGTACAGGACAAC
CAGAAACTAAATGGTCAATAGACTCAACATGTTTGTTACAAAATCTACAG
TTAGGATCAGATCCATTTTTTAAGATGTTCGCCTGGTAGTTCCTAGTGAA
CAAACTTTGATCCTGGGCAGCTAGTATAAAGCCTTCCGTCTCTGCCTTCA
GTCCTGAGCTCCTTAGCCACTGATGGGTTGCTTCTATATCTACATCAGCT
TGGTGGCTTCGGTGATAGTACTGACCGTGCAGTGATTTCTGGCTCCATGT
TTGCTCCAGCTTTTTTCTCCCTGCTAACTTGGCTTTGCATTTGATGGATT
TGGCAATTTTGGTAGCAGGCTGGTCTAAAACGACGTCAGGTTCGGTGTTA
ATATCTAATTCCCGGGC Run BLAST on NCBI protein sequence of TCONS_00034769-protein >TCONS_00034769-protein ID=TCONS_00034769-protein|Name=TCONS_00034769-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
ARELDINTEPDVVLDQPATKIAKSIKCKAKLAGRKKLEQTWSQKSLHGQY
YHRSHQADVDIEATHQWLRSSGLKAETEGFILAAQDQSLFTRNYQANILK
NGSDPNCRFCNKHVESIDHLVSGCPVLTPNEYVKRHDRVGQYLHWCICKH
YGVETDASFWYEHHPPAVVESKNVTILWDFPINTDRTIKANRPDIVVKDR
KKRTCLLIDMSVPSDRNVSVKMLDKLSKYKDLEIETQKMWNLKTTVVPEI
VGALGLVRTGVQDFVEKIPGNPQLQEIRK Run BLAST on NCBI transcript from alignment at sc0001216:47784..48650 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00034769 ID=TCONS_00034769|Name=TCONS_00034769|organism=Clytia hemisphaerica|type=transcript|length=867bp|location=Sequence derived from alignment at sc0001216:47784..48650 (Clytia hemisphaerica)
GCCCGGGAATTAGATATTAACACCGAACCTGACGTCGTTTTAGACCAGCC
TGCTACCAAAATTGCCAAATCCATCAAATGCAAAGCCAAGTTAGCAGGGA
GAAAAAAGCTGGAGCAAACATGGAGCCAGAAATCACTGCACGGTCAGTAC
TATCACCGAAGCCACCAAGCTGATGTAGATATAGAAGCAACCCATCAGTG
GCTAAGGAGCTCAGGACTGAAGGCAGAGACGGAAGGCTTTATACTAGCTG
CCCAGGATCAAAGTTTGTTCACTAGGAACTACCAGGCGAACATCTTAAAA
AATGGATCTGATCCTAACTGTAGATTTTGTAACAAACATGTTGAGTCTAT
TGACCATTTAGTTTCTGGTTGTCCTGTACTGACTCCAAATGAATATGTGA
AGCGCCACGACCGTGTTGGGCAATACCTTCACTGGTGCATCTGTAAGCAT
TACGGAGTCGAAACTGACGCATCTTTCTGGTATGAACACCATCCACCAGC
TGTAGTTGAATCCAAGAATGTCACCATCTTGTGGGATTTCCCAATCAACA
CAGACAGAACGATAAAGGCTAATAGACCAGACATTGTAGTGAAGGATCGG
AAGAAGAGAACTTGCTTACTGATCGATATGAGTGTCCCCAGTGACAGAAA
TGTTTCAGTTAAGATGCTTGATAAACTAAGCAAGTACAAAGATCTTGAAA
TAGAGACCCAGAAAATGTGGAATTTGAAAACAACAGTAGTACCAGAGATT
GTAGGGGCCCTTGGGCTAGTGAGAACGGGTGTCCAAGACTTTGTTGAGAA
AATCCCTGGAAATCCACAGCTACAAGAAATAAGAAAATAGTTCTAACAAG
TACCGCACATATTCTCC Coding sequence (CDS) from alignment at sc0001216:47784..48650 >TCONS_00034769 ID=TCONS_00034769|Name=TCONS_00034769|organism=Clytia hemisphaerica|type=CDS|length=840bp|location=Sequence derived from alignment at sc0001216:47784..48650 (Clytia hemisphaerica)
GCCCGGGAATTAGATATTAACACCGAACCTGACGTCGTTTTAGACCAGCC
TGCTACCAAAATTGCCAAATCCATCAAATGCAAAGCCAAGTTAGCAGGGA
GAAAAAAGCTGGAGCAAACATGGAGCCAGAAATCACTGCACGGTCAGTAC
TATCACCGAAGCCACCAAGCTGATGTAGATATAGAAGCAACCCATCAGTG
GCTAAGGAGCTCAGGACTGAAGGCAGAGACGGAAGGCTTTATACTAGCTG
CCCAGGATCAAAGTTTGTTCACTAGGAACTACCAGGCGAACATCTTAAAA
AATGGATCTGATCCTAACTGTAGATTTTGTAACAAACATGTTGAGTCTAT
TGACCATTTAGTTTCTGGTTGTCCTGTACTGACTCCAAATGAATATGTGA
AGCGCCACGACCGTGTTGGGCAATACCTTCACTGGTGCATCTGTAAGCAT
TACGGAGTCGAAACTGACGCATCTTTCTGGTATGAACACCATCCACCAGC
TGTAGTTGAATCCAAGAATGTCACCATCTTGTGGGATTTCCCAATCAACA
CAGACAGAACGATAAAGGCTAATAGACCAGACATTGTAGTGAAGGATCGG
AAGAAGAGAACTTGCTTACTGATCGATATGAGTGTCCCCAGTGACAGAAA
TGTTTCAGTTAAGATGCTTGATAAACTAAGCAAGTACAAAGATCTTGAAA
TAGAGACCCAGAAAATGTGGAATTTGAAAACAACAGTAGTACCAGAGATT
GTAGGGGCCCTTGGGCTAGTGAGAACGGGTGTCCAAGACTTTGTTGAGAA
AATCCCTGGAAATCCACAGCTACAAGAAATAAGAAAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00034769-exon-sc0001216-1491911889:47784..48650 | TCONS_00034769-exon-sc0001216-1491911889:47784..48650 | Clytia hemisphaerica | exon |
| TCONS_00034769-exon-sc0001216-1510915933:47784..48650 | TCONS_00034769-exon-sc0001216-1510915933:47784..48650 | Clytia hemisphaerica | exon |
| TCONS_00034769-exon-sc0001216-1575043694:47784..48650 | TCONS_00034769-exon-sc0001216-1575043694:47784..48650 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001216 | supercontig | sc0001216:47784..48650 . |
Blast
The following BLAST results are available for this feature:
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