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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00033421 ID=TCONS_00033421|Name=TCONS_00033421|organism=Clytia hemisphaerica|type=transcript|length=1283bp
ATTTTAAATAATCTTTAAAGCTTTAAATTTGGCTGATAGAATCTTGTGAA
ACAATAACAGAATTGAAACACGGCAATAACTTCAAGTGACTCAAGTCATT
AAGGTCAATAAAAAAGCAATGTCATAACAAAAAACCAATCAAGTGAATAT
AGTTCAGCTTTTCAATTCAATTAGACAATTTGAACACTTTTGACAAAATG
TACGATTTCGAATATTCAAATAAAACATTCAATGATGTGTACTctacttt
ttcatgatgattGATTTCAACAGCTACATCTTTATGTTCTTTAAGTCTTT
GGAGTCAACCAACAAAGCGAAGTTTCTCCTTTTCTGCCATTGGAATTTCA
GTAAATTTTTCAACAACCATGAAAAGACAATCAAaagcaattttaaattt
tagtttGGATTGATTTTCTTCCACTTTAAATTGAGACTACCAAGATTGgt
cacaattttatttcaaaaaaccttCTTTACACAATCGTCACAATTGATTA
CTCAGCCATTCCAGATCAGAGGAAAGGGTATATATGAAATGTTATGTCAA
ACTCATTTTTGCCACACCAGTAGGGACCAAGGAATGCTGCAACCTAACCC
ATGCAACATAGAGACGGTTAAACAGGGCATACACTCCACCATGTGTGGTT
GAAAATCTGTTGTAGTGACTTGATTAACAGTGAGCTTGAAAGGAAGTGAA
GACAATATGGATGCTTTATACACTGCCAGACTGCTGCGGACAGTTGTAGG
TTTGTTCAGATCAGGTTAAGTTTTAAGTTGATAACTCACAATGGTTGGGC
AAAATTTTCCATCTTTGTACAGTGGCAGTGAATCAGTCATAATTCCTTAC
ATTTAGTGATTTATGTTCTCTTTAGTGATTTTGTTCTTTTGGTTGACTTC
AACACTTTATGACCACCAACAATCTGTTATCTGCTATTTGTAACGAAAGT
CATGGTATAACTTATGATCTTGCAGTTGCTACATTGGTGTAAGGTCAGAA
GGTTGCCAATTAACAGTTGACATTGAATGAACTTTGTTGAGGTTGGGACG
TACTGTTATCACAGTGACACAGATTTTGAGAAATTGAAACCAAAATATGA
TACCTTCTTTCTATGGAAACACACCAACCAAATTTTCCAGACTTTAGATA
ATAAGCAGGCTATAGCCTAGCTAGCTTCAACTAGCTACAAGTTTAAAACA
CATCACAGTCATTTTTCTCTGTTAGTTCAGGTTTGTTTGTAgctagtttt
ttttttcgcaaGTTTTGGATGATTTTGTTGTGA Run BLAST on NCBI transcript from alignment at sc0001054:42868..44150 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00033421 ID=TCONS_00033421|Name=TCONS_00033421|organism=Clytia hemisphaerica|type=transcript|length=1283bp|location=Sequence derived from alignment at sc0001054:42868..44150 (Clytia hemisphaerica)
TCACAACAAAATCATCCAAAACttgcgaaaaaaaaaactagcTACAAACA
AACCTGAACTAACAGAGAAAAATGACTGTGATGTGTTTTAAACTTGTAGC
TAGTTGAAGCTAGCTAGGCTATAGCCTGCTTATTATCTAAAGTCTGGAAA
ATTTGGTTGGTGTGTTTCCATAGAAAGAAGGTATCATATTTTGGTTTCAA
TTTCTCAAAATCTGTGTCACTGTGATAACAGTACGTCCCAACCTCAACAA
AGTTCATTCAATGTCAACTGTTAATTGGCAACCTTCTGACCTTACACCAA
TGTAGCAACTGCAAGATCATAAGTTATACCATGACTTTCGTTACAAATAG
CAGATAACAGATTGTTGGTGGTCATAAAGTGTTGAAGTCAACCAAAAGAA
CAAAATCACTAAAGAGAACATAAATCACTAAATGTAAGGAATTATGACTG
ATTCACTGCCACTGTACAAAGATGGAAAATTTTGCCCAACCATTGTGAGT
TATCAACTTAAAACTTAACCTGATCTGAACAAACCTACAACTGTCCGCAG
CAGTCTGGCAGTGTATAAAGCATCCATATTGTCTTCACTTCCTTTCAAGC
TCACTGTTAATCAAGTCACTACAACAGATTTTCAACCACACATGGTGGAG
TGTATGCCCTGTTTAACCGTCTCTATGTTGCATGGGTTAGGTTGCAGCAT
TCCTTGGTCCCTACTGGTGTGGCAAAAATGAGTTTGACATAACATTTCAT
ATATACCCTTTCCTCTGATCTGGAATGGCTGAGTAATCAATTGTGACGAT
TGTGTAAAGaaggttttttgaaataaaattgtgacCAATCTTGGTAGTCT
CAATTTAAAGTGGAAGAAAATCAATCCaaactaaaatttaaaattgcttT
TGATTGTCTTTTCATGGTTGTTGAAAAATTTACTGAAATTCCAATGGCAG
AAAAGGAGAAACTTCGCTTTGTTGGTTGACTCCAAAGACTTAAAGAACAT
AAAGATGTAGCTGTTGAAATCaatcatcatgaaaaagtagAGTACACATC
ATTGAATGTTTTATTTGAATATTCGAAATCGTACATTTTGTCAAAAGTGT
TCAAATTGTCTAATTGAATTGAAAAGCTGAACTATATTCACTTGATTGGT
TTTTTGTTATGACATTGCTTTTTTATTGACCTTAATGACTTGAGTCACTT
GAAGTTATTGCCGTGTTTCAATTCTGTTATTGTTTCACAAGATTCTATCA
GCCAAATTTAAAGCTTTAAAGATTATTTAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00033421-exon-sc0001054-1491911889:42868..44150 | TCONS_00033421-exon-sc0001054-1491911889:42868..44150 | Clytia hemisphaerica | exon |
| TCONS_00033421-exon-sc0001054-1510915933:42868..44150 | TCONS_00033421-exon-sc0001054-1510915933:42868..44150 | Clytia hemisphaerica | exon |
| TCONS_00033421-exon-sc0001054-1575043694:42868..44150 | TCONS_00033421-exon-sc0001054-1575043694:42868..44150 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001054 | supercontig | sc0001054:42868..44150 . |
Blast
The following BLAST results are available for this feature:
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