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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00031851 ID=TCONS_00031851|Name=TCONS_00031851|organism=Clytia hemisphaerica|type=transcript|length=910bp
CCTTTGTCAAGTCCAGTCTCTTGTTCTAAGACTTTGAGTAGTGTCTTGTG
TGGACGACCTCTCTTCTTTGTTAAGAATGTTGGCTGCCAAAGGAGAAGTT
TAGATGCCGGCTCATTTCCTCTGATGACGTGACCTGCTAActgcaatatt
tttttctggatAACATAAGACTACTCAATCGGTGCAGCTTGCCGTACAAC
ACTTTGTTAGTAATGTGGACATTAGACTGgatgttttttacttttctaaG
CATTCTCGTATACGCTCCGTCTAGTTTCTTTGTCAGAGTAGACGTTAGTG
ACCATGATTCACAGGAGTATAGGAGGATGGACTCGACAGTTGACTTGAAG
AGTTGCACTTTTATACTGAGTGAAGCTTCTGATTTCCAAATTTTCTCAAG
TGAATTTAGTACCGACCAAGCTTGGGCAAATCTTATCTCTATGTCATGGT
TAGAGTTTGTGTAAGCTCCAAGGTATTTGAAATCGTCAAGCTTTTCCAGG
GCGATACCATTAACAGATTGCTGGATGCCATCGTTTGTTGTAGGGTTGAT
GTGCATATATTTGGTTTTCTTAGCGTTGAGAAAGAGACCGATTGATTGAG
TTGATATCTCTAGCTTGTGTAGGAGCTTTTCAGCTTCGACTACTGTTTCA
TTTAGAAGAGATATATCGTCTGCAAAGTCAAGATCTGCTAATCTCGGTAT
GATGTCGTCTACTTCTGCGTTTTTCAATAGTGAATCCATCTTCAGAAGTA
ATTGCTGTCCTCAGAGCATAATCGAGCACAACAATAAAGAGGTAAGGTGC
TAATGGATCACCTTGAAGCACACCAGTTACAACATCAAAGAATTCGGTTT
CTCCTTCAGATGTCATTACATTGGCTCTGTTATTGGTATACATAATCTGG
AATGCATTAA Run BLAST on NCBI protein sequence of TCONS_00031851-protein >TCONS_00031851-protein ID=TCONS_00031851-protein|Name=TCONS_00031851-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MDSLLKNAEVDDIIPRLADLDFADDISLLNETVVEAEKLLHKLEISTQSI
GLFLNAKKTKYMHINPTTNDGIQQSVNGIALEKLDDFKYLGAYTNSNHDI
EIRFAQAWSVLNSLEKIWKSEASLSIKVQLFKSTVESILLYSCESWSLTS
TLTKKLDGAYTRMLRKVKNIQSNVHITNKVLYGKLHRLSSLMLSRKKYCS Run BLAST on NCBI transcript from alignment at sc0000932:29339..30248 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00031851 ID=TCONS_00031851|Name=TCONS_00031851|organism=Clytia hemisphaerica|type=transcript|length=910bp|location=Sequence derived from alignment at sc0000932:29339..30248 (Clytia hemisphaerica)
TTAATGCATTCCAGATTATGTATACCAATAACAGAGCCAATGTAATGACA
TCTGAAGGAGAAACCGAATTCTTTGATGTTGTAACTGGTGTGCTTCAAGG
TGATCCATTAGCACCTTACCTCTTTATTGTTGTGCTCGATTATGCTCTGA
GGACAGCAATTACTTCTGAAGATGGATTCACTATTGAAAAACGCAGAAGT
AGACGACATCATACCGAGATTAGCAGATCTTGACTTTGCAGACGATATAT
CTCTTCTAAATGAAACAGTAGTCGAAGCTGAAAAGCTCCTACACAAGCTA
GAGATATCAACTCAATCAATCGGTCTCTTTCTCAACGCTAAGAAAACCAA
ATATATGCACATCAACCCTACAACAAACGATGGCATCCAGCAATCTGTTA
ATGGTATCGCCCTGGAAAAGCTTGACGATTTCAAATACCTTGGAGCTTAC
ACAAACTCTAACCATGACATAGAGATAAGATTTGCCCAAGCTTGGTCGGT
ACTAAATTCACTTGAGAAAATTTGGAAATCAGAAGCTTCACTCAGTATAA
AAGTGCAACTCTTCAAGTCAACTGTCGAGTCCATCCTCCTATACTCCTGT
GAATCATGGTCACTAACGTCTACTCTGACAAAGAAACTAGACGGAGCGTA
TACGAGAATGCttagaaaagtaaaaaacatcCAGTCTAATGTCCACATTA
CTAACAAAGTGTTGTACGGCAAGCTGCACCGATTGAGTAGTCTTATGTTa
tccagaaaaaaatattgcagTTAGCAGGTCACGTCATCAGAGGAAATGAG
CCGGCATCTAAACTTCTCCTTTGGCAGCCAACATTCTTAACAAAGAAGAG
AGGTCGTCCACACAAGACACTACTCAAAGTCTTAGAACAAGAGACTGGAC
TTGACAAAGG Coding sequence (CDS) from alignment at sc0000932:29339..30248 >TCONS_00031851 ID=TCONS_00031851|Name=TCONS_00031851|organism=Clytia hemisphaerica|type=CDS|length=603bp|location=Sequence derived from alignment at sc0000932:29339..30248 (Clytia hemisphaerica)
ATGGATTCACTATTGAAAAACGCAGAAGTAGACGACATCATACCGAGATT
AGCAGATCTTGACTTTGCAGACGATATATCTCTTCTAAATGAAACAGTAG
TCGAAGCTGAAAAGCTCCTACACAAGCTAGAGATATCAACTCAATCAATC
GGTCTCTTTCTCAACGCTAAGAAAACCAAATATATGCACATCAACCCTAC
AACAAACGATGGCATCCAGCAATCTGTTAATGGTATCGCCCTGGAAAAGC
TTGACGATTTCAAATACCTTGGAGCTTACACAAACTCTAACCATGACATA
GAGATAAGATTTGCCCAAGCTTGGTCGGTACTAAATTCACTTGAGAAAAT
TTGGAAATCAGAAGCTTCACTCAGTATAAAAGTGCAACTCTTCAAGTCAA
CTGTCGAGTCCATCCTCCTATACTCCTGTGAATCATGGTCACTAACGTCT
ACTCTGACAAAGAAACTAGACGGAGCGTATACGAGAATGCttagaaaagt
aaaaaacatcCAGTCTAATGTCCACATTACTAACAAAGTGTTGTACGGCA
AGCTGCACCGATTGAGTAGTCTTATGTTatccagaaaaaaatattgcagT
TAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00031851-exon-sc0000932-1491911889:29339..30248 | TCONS_00031851-exon-sc0000932-1491911889:29339..30248 | Clytia hemisphaerica | exon |
| TCONS_00031851-exon-sc0000932-1510915933:29339..30248 | TCONS_00031851-exon-sc0000932-1510915933:29339..30248 | Clytia hemisphaerica | exon |
| TCONS_00031851-exon-sc0000932-1575043694:29339..30248 | TCONS_00031851-exon-sc0000932-1575043694:29339..30248 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000932 | supercontig | sc0000932:29339..30248 . |
Blast
The following BLAST results are available for this feature:
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