TCONS_00024401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024401
Unique NameTCONS_00024401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1881

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024401 ID=TCONS_00024401|Name=TCONS_00024401|organism=Clytia hemisphaerica|type=transcript|length=1881bp
TTTAGATATTCTCTTTCTAAAACATGCTGATGTATTGCAGAAATCATCTA
TCACGGTTAAAACTCTCAAATAAAGTTATAATTTCTTCACCTCAATGCGG
ATGTTCCACTGAAGTCTCCCCACCTTTAAAGAAGAAACGAAAACTAATAT
ACGCTAAGGGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAAGTCG
GGTAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTCAAGGGACCATAA
AGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCA
TTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGAGCATCAATACCGT
GCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGG
AGAACACATACATATACATGTAAGTGTgttaatatgtttttattgttttt
attaaatgGNAAATGGAGAACACATGCATATACAGATCCCCGTGGGTACT
GTGATTACGAACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAA
GGGAGAAGCATATACAGTTGCCAAGGGTGGATCTAAAGGTCTTGGTAATG
TCCATTTCAAGTCACCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGA
GGAACAGGAGAAGAAATATTTGTAGAGTTGGAACTGAAATCAATCGCTGA
TATTGGCTTGGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCTCCATT
GCATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAACATTG
AAACCAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTTTCAGT
TGCTGATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGTTGGTCTTG
GACATGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAATGTATGTT
ATGGATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAAA
GGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCA
TAGCGAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATAAC
ATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGctaaattcaa
tcaaaatattgaaGAGTTGAAAAGTCTTATATTGCAGAAAAGGAAATTTA
AGCATACTAGCTAATgagaaaagaaaaacgaaaaatagaTTATATGTTAT
GGATTGCTCATCACCAGACATGCTTTCCCAGTTCGAAATCCTGAAAACGG
AGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATA
GCTAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATGACAT
ACAACAACATGTAAACATGCCCTTTGTCCCACTCTCTGCTAAATTCAGTC
AAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAATGGAAATTTAAG
CATACTGGCTAAtgggaaaagaaaaatgaaaaatagattaTATGTTGTGG
TTTGTTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAG
TTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGC
GAATAAAATCGATTTGATACAAGACCAAGACGAGATGAGAAATAACATAC
AACAACATGTAAACATGCCTGTTGTCCCACTCTCTGAGTAAATTCAGTCA
AAATATTGAAGAgttgaaaaatcttttattgCAGAAATGGAAATTTAAGC
ATACTGGCTaatgagaaaagaaaaatgaaaaatagattatttaggttgta
ttttatttcttttaaagtatGATGTTTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000491:51610..58521-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024401 ID=TCONS_00024401|Name=TCONS_00024401|organism=Clytia hemisphaerica|type=transcript|length=6912bp|location=Sequence derived from alignment at sc0000491:51610..58521- (Clytia hemisphaerica)
TTTAGATATTCTCTTTCTAAAACATGCTGATGTATTGCAGAAATCATCTA
TCACGGTTAAAACTCTCAAATAAAGTTATAATTTCTTCACCTCAATGCGG
ATGTTCCACTGAAGTCTCCCCACCTTTAAAGAAGAAACGAAAACTAATAT
ACGCTAAGGGTTGGTATTTATGATGTAGTTTATTTTCTATTGTCTAAATA
ATAACTGTAAGTTGGTCTAATATCGACATCCCTCCTTTAATTCCGACACC
CTTCTTTAGAGACAGGAATAATATGAAAGCTTGAATCACTGATTGAAAAA
GGATTATTCCTCTCAGACCACTAAGCAAAGAAAAACAGTTTTAACCTTTC
TATCAATTTCAGGTGATAAAAAGGGTGTCGGAATTAGAGGAGGGGTGTCG
ACATTAAGTTACGTAAGTATAAAGCTAATTTATTGTATGTTCTGTGATTG
AAGACCTTGGTTTGAAAACTATAATGAGAATGCAACCTTTCCTTAATCCT
AATTTGTTGATTACAAATTCCATTGCATTTTTCATTTTGCCAGGTAAAAC
ATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGGTAATGGTGGGAATG
GTTCAGCCTCATTTGTTCACTCAAGGTATGTATAACGTATTCCTATTTGA
ATCGAGACATTCTTATATAGATATACACAAAAACAATAACATATCATATA
AAAGATGTGCACTAGAAAGGTGTCATCAGCGTTTTTTGGAGCTCTTTGTT
TAAAAAGCAATTGAAATAACAACTTTGAATTTGAAGACCCCCTTTTTAAA
CAGCTGTTTGTAGTAAATTTTCCAATTCTCACAAATCAAATATTATAACA
GTGTCAAATGTCAAATGTCAAATCAAGTGTCAAATGGAGGGGTTGCCAGT
TCAATTCCAAGCTAGGTTAAAAATTAGATAATCAGACCCTTGGACAAATG
GGAAACGGGGCTAAACTTAAAATGTTTTTGCTTCTTTTTTATGAGAAAAA
AGTGTAACCAAGATAACAATGATAGGTGTTTATTGCCTGGCACTAAGCAC
TCAAAAATATTTTGAATATCAAAAGAGTGGACTGCGTGGATGAGTAGCAA
GTCACCAAGCCTCTTCAAATGAATGTAACAACCTCCTTGAAAACAAAAGG
AAAGGTCAATTATGGACCAATTCTTTTAGAGAAAAAAATATCTTGATTTC
TATTCTATTTTAATTAATTTGTTAGCTCATTTTAGAAATTTAATAGGTCT
TTGATCTCTCTGATCAGTCTGAATTCTAATTGAGAAAATTATATTAAAAA
AGGAATATGTGAAATTCTTTCATTACGCCATTAGAGCTCAAAAAACACCA
ATGAGACCTTCCTATGTGCACATCTTAGGAATAGTTCAATTCAAATAAAA
ACGTTATATAATTATTTTTGAATTGAAACTAATGAAACATATGATTCTCA
TTTTACTCTTAAAATAATTATAAATGCTTTCTTGCAGTTTCTTAAAATAT
TTTTTTTTCAGTTGGTCCCTTTGATTGTGGTCTTTTTTCTAAAACGAAAT
TCATTGCTTCAAATTAGCTCATTGAACAAATTTGATTTTTTCTTCATAAG
GGACCATAAAGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCTGATG
TCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGAGCAT
CAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGCATGG
AAAGAATGGAGAACACATACATATACATGTAAGTGTGTTAATATGTTTTT
ATTGTTTTTATTAAATGGNAAATGGAGAACACATGCATATACAGGTAAGT
GTGTCAATATATTTTCTTATTGATTAAGTGGAATGTCCTTGTTTATGTTT
TTCTGTAGAAATAATTTTGAAACTACTTAAAAGCTACTTTGAAATATTTT
TGTGGTCATGCTTCTCTAAATATTAAAATATTATAAGCAACATAAAATAT
AAACATTGTTCGAGACATGTCCTGCACGTTTTTTTTATAAGGAACTTTAA
CTTGGCTCCAAGTCTGGATTTCCTTATTTTTCCAGAGAATTTCAGCCTCA
AAGTTCCTTAACGGGGCTCTTATTTACTAAGCTGCCAAGTTTGGATTAAT
AGGTTACTTTGTTAAACAATGGACTACAATACAGAAAAACGCGTTTTTCA
ACATTGTTTTGTCAATATTTATAAACGTTTTGTTTAGATTTTTGTAAACG
CGTACAAGTTCAAGTTTAACTTGTACTGTTTCTTAACTTTTTTTCTTATT
CTCAGCCTGAGCAGTTCCTTAACAATTCCTTGTTTTTTAAACCATTTTCA
GCCTCAAGTTCCTTATAAACAACGTGTTCCTTATAAAACAAAGACAGCAT
GTGTGATTTTTAGATTTTAGATTTTTGATTTGGGATATAGTTTTTTTTGT
AACTATTTTTATGTGCCTTTCAACTGATCCAGTGACAACACTTTTTTGAA
TTCTTTACACTATTGAAACATCTTTACATTTTTATTTTGGCTGCAGATCC
CCGTGGGTACTGTGATTACGAACTCAAATAGTGACAAAGAACTAGCAGAT
TTAACGAGAAAGGGAGAAGCATATACAGTTGCCAAGGGTGGATCTAAAGG
TAGGCACATCACATCTACTTTGGAGCAAAATCGACTATAATTGCAAGGTC
AATTTTCTTTCTTATTATGTTATTTCCATTGCATGACTTTGTAATAATTC
TTCATTAATTTTAATGATTAATTAATATAAATTAATCATAATTTTTAATT
TAAGGCCTAGGGGGTAATCCAGAAGAAAGCAACTTATTAATTAATCTTTT
GTGATTCTTTTTTCTTTACGAGATGATAGCTGTGAATGAAATAGTTGTTT
TGCATTTTTGGTAACTTTTAAAAGGTCTTGGTAATGTCCATTTCAAGTCA
CCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAACAGGAGAAGA
AATATTTGTAGAGTTGGAACTGAAATCAATCGCTGATATTGGCTTGGTAT
GAGCATTTATTTGAATAGAGAATTAAAAATGACATCACTAGCCCCCTGTT
GCAATGAAATTGCGTCAAAANTGAAATCAATCGCTGATATTGGCTTGGTA
TGAGCATTTATTTGAATAGAGAATTAAAAATGACATCACTAGCCCCCTGT
TGCAATGAAATTGCGCCAAAAATGATTTTTTTTTGTCCAATCTCTCAAAG
GAATGCTCTAAATAAGTTTGAGTTTATCAACCCAGTGATATTCATAATGG
AAGTTAAATCGTAGCTTGGATCATGAGATTTACGTTTGGCTACGTTTCGA
GAGATTCTTCTCCCATCATCGGGAAATGTAGAGGATGTTTTCTCCACTGT
TTGTACTAAGACATTCTGTTATGGCGCGCCAAAGCGGAAATAAATACTAT
CTCTCATTTCGCGACACTACCTTTCATTTCACGACACTATCTTTCACTTT
GCGGCACTATCTTTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCACTA
TCTTTCATTTCGCGACACTATCTTTCATTTCGCGACACTATCTTTTATTT
CGCGACACTATCTTTCATTTCGCGACACTATCTTTTATTTCGCCACACTA
TCTTTATTAAAACGACACTATCTTTTTTAAAACGACACTATCTTTTTTAA
AACGATACTATCTTTCCAAAAAACATTATCTTAATTGAAACAATACTATC
TTTTTTACGGGATACTATCTTTTTTATGGAAGCCGAGAAGTGCCATCGAC
AAAAAAATATTTAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGT
GCCGCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAAT
GAAAGATAGTGCCGCGAAATGAAAGATAGTATCGCGAAATGAAAGATACT
ATTTATTTCCGCTTTGGCGCGCCATATTCTGTACCCATAATTATCAAGTG
TAATTTCCTTGCAAGGTGTGAATCCCCATGTTATCATAGTTGTAAGGTAA
AATAGCTCTTGAACTTATGAGATTACTCATTACTGTGATTTCCATTTTGC
CTCTCTGTTCGGTTGGGAACCCAAATATTCTCTCAAATGAACTTTGTTTG
CATTTATAGGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCTCCATTG
CATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAACATTGA
AACCAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTTTCAGGT
TTTTATCTTTCGTTTCCTTGTGTTAACACATTTCTGCCTATTACTTCTTA
GTAACATTACCTGACATTCTAAGAATTTCATAAAAGTTTGCTTGATTTTG
CTCCTCAATTTCTGAATATATGGGGTTTCAAATAATTTTCATGACTTTTA
GTGGATCATGTAAATTTGAGATATTTTATTCTTGTTTACTCATTAAAAAA
CCCAAATTATTTTTATTTGTAACCGTTTAGTTGCTGATATCCCTGGCATA
GTCAAGGGAGCCCACGAAAACGTTGGTCTTGGACATGAATTCTTACGCCA
CGTTGAACGTTGCCATATGTTAATGTATGTTATGGATTGCTCATCACCGG
ACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAA
GCTGGACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTT
GATACAAGACCAAGACGAAATGAGAAATAACATACAACAACATGTAAACA
TGCCTGTTGTCCCACTCTCTGCTAAATTCAATCAAAATATTGAAGAGTTG
AAAAGTCTTATATTGCAGAAAAGGAAATTTAAGCATACTAGCTAATGAGA
AAAGAAAAACGAAAAATAGATTATATGTTATGGATTGCTCATCACCAGAC
ATGCTTTCCCAGTTCGAAATCCTGAAAACGGAGTTAGATCTTTACAAAGC
TGGACTGTCAACAATATCATCCATCTTCATAGCTAATAAAATCGATTTGA
TACAAGACCAAGACGAAATGAGAAATGACATACAACAACATGTAAACATG
CCCTTTGTCCCACTCTCTGCTAAATTCAGTCAAAATATTGAAGAGTTGAA
AAGTCTTATATTGCAGAAATGGAAATTTAAGCATACTGGCTAATGGGAAA
AGAAAAATGAAAAATAGATTATATGTTGTGGTTTGTTCATCACCGGACAT
GCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTG
GACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATA
CAAGACCAAGACGAGATGAGAAATAACATACAACAACATGTAAACATGCC
TGTTGTCCCACTCTCTGAGTAAATTCAGTCAAAATATTGAAGAGTTGAAA
AATCTTTTATTGCAGAAATGGAAATTTAAGCATACTGGCTAATGAGAAAA
GAAAAATGAAAAATAGATTATTTAGGTTGTATTTTATTTCTTTTAAAGTA
TGATGTTTGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013697XLOC_013697Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024401-exon-sc0000491-1575043694:58363..58521TCONS_00024401-exon-sc0000491-1575043694:58363..58521Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1575043694:57897..57978TCONS_00024401-exon-sc0000491-1575043694:57897..57978Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1575043694:56678..56921TCONS_00024401-exon-sc0000491-1575043694:56678..56921Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1575043694:55873..55975TCONS_00024401-exon-sc0000491-1575043694:55873..55975Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1575043694:55476..55597TCONS_00024401-exon-sc0000491-1575043694:55476..55597Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1575043694:52874..53012TCONS_00024401-exon-sc0000491-1575043694:52874..53012Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1575043694:51610..52641TCONS_00024401-exon-sc0000491-1575043694:51610..52641Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1510915933:58363..58521TCONS_00024401-exon-sc0000491-1510915933:58363..58521Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1510915933:57897..57978TCONS_00024401-exon-sc0000491-1510915933:57897..57978Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1510915933:56678..56921TCONS_00024401-exon-sc0000491-1510915933:56678..56921Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1510915933:55873..55975TCONS_00024401-exon-sc0000491-1510915933:55873..55975Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1510915933:55476..55597TCONS_00024401-exon-sc0000491-1510915933:55476..55597Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1510915933:52874..53012TCONS_00024401-exon-sc0000491-1510915933:52874..53012Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1510915933:51610..52641TCONS_00024401-exon-sc0000491-1510915933:51610..52641Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1491911889:58363..58521TCONS_00024401-exon-sc0000491-1491911889:58363..58521Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1491911889:57897..57978TCONS_00024401-exon-sc0000491-1491911889:57897..57978Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1491911889:56678..56921TCONS_00024401-exon-sc0000491-1491911889:56678..56921Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1491911889:55873..55975TCONS_00024401-exon-sc0000491-1491911889:55873..55975Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1491911889:55476..55597TCONS_00024401-exon-sc0000491-1491911889:55476..55597Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1491911889:52874..53012TCONS_00024401-exon-sc0000491-1491911889:52874..53012Clytia hemisphaericaexon
TCONS_00024401-exon-sc0000491-1491911889:51610..52641TCONS_00024401-exon-sc0000491-1491911889:51610..52641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000491supercontigsc0000491:51610..58521 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.3789	0.85977	0.829487	1.10542	0.00522745	1.15479	4.61622e-06	0.641891	0.536714	5.04277e-07	0.755113	0.655252	0.198449	1.083	1.52062	1.22204	0.426539	1.36388	0.826107	0.394048	1.12735	0.619175	3.2162	2.85554	0	0	0.50049	0	2.34256	1.6898
Blast
[Close]
BLAST of TCONS_00024401 vs. Swiss-Prot (Human)
Match: MTG2 (Mitochondrial ribosome-associated GTPase 2 OS=Homo sapiens GN=MTG2 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.282e-59
Identity = 132/338 (39.05%), Postives = 197/338 (58.28%), Query Frame = 3 
Query:  162 KTFVDWKRIYIKSGNGGNGSASFVHSRDHKXXXXXXXXXXXXX--VIFIADDAYSQLSHLEHQYRAKNGGNGSKKNRHGKNGEHIHIHVSVLICFYCFY*MXNGEHMHIQIPVGTVITNSNSDKELADLTRKGEAYTVAKGGSKGLGNVHFKSPTRVRPREFXXXXXXXXIFVELELKSIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDLTVSVADIPGIVKGAHENVGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFEILKKELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLSAKFNQNIEEL 1169
            + FVD++R+ +  GNGG G++ F HS   K       G  G    VI   D     LS +  +Y+  +G +G  KN  G++G       +VL               +I++PVGT++      + +ADL+  G+ Y  A GG+ G GN  F +     P   T G  G++  + LELK++A  G+VGFPNAGKSSLL  IS A P +  YPFTTLKP++G+++ +  L ++VADIPGI++GAH+N GLG  FLRH+ERC  L++V+D S P+  +Q + LK EL++Y+ GLS      +ANKIDL + Q  + + ++ H+   V+ LSA   +N+E+L
Sbjct:   70 RYFVDYRRVLVCGGNGGAGASCF-HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSG-------AVL---------------YIRVPVGTLVKEGG--RVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANL-SQLRDHLGQEVIVLSALTGENLEQL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00024401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTG21.282e-5939.05Mitochondrial ribosome-associated GTPase 2 OS=Homo... [more]
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