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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023679 ID=TCONS_00023679|Name=TCONS_00023679|organism=Clytia hemisphaerica|type=transcript|length=765bp
CGATTCTCATCaactgaccataaaacaaacaaaaaaatgaagattgtCAT
TGTCTCTCTTGCTCTCTTGGCTGTTGCTGCCGCCCTCAAAGTTGGAACCG
AAACTGGTACCACACCACCAGCTGTCCCATGCCCAGACTCCCTCTGCCAT
GGAAAAGCCGACGGAAACTTCCAATACATCTACTATGGACGACTCAACAA
AAACTACTTCCTCCAATGCTCAAACGGATTAGCTTACTGTCAAGCCTGCT
GGCCATTGTCCTTGGAATTCAGTGAAAACTGCAACCAATGTTTGTACAGC
AAACACGACGACTGTGTCACCACACAAAAATGGCACCCAGCCACCACCTT
CGCTTGCCCAGACAAATGCCCAGCCCGTGGACCACACTTCAGTGGAAACA
TTGAAGACCCACACAACCCACACCAATACATCGCTTGCTTCCACGGACAA
ACTGTCGGATGCATCGCTTGCCCAAAGGGATTGGAATTCAACGAGAAATG
GAACGCCTGTCTGTTCAAAGGAAAATTCAAAACCGAGCCAGACcactaaa
tttatttttgaaaaacattttgtagtgattttttaaccaaaaacctaaaa
tctttAAATGCTAATTTTGTAACCTTATCTTTTTTGCCTCTAACATCCTC
ACTTTTAtgctctttttttttaatttctaatttttaataTCTGtcaaatt
tcttcttcttcaaatgTAAATCCTCACTGTTCTTTCATCAAAATAAATCT
CAATTTCAAATAATT Run BLAST on NCBI transcript from alignment at sc0000458:94650..95585+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023679 ID=TCONS_00023679|Name=TCONS_00023679|organism=Clytia hemisphaerica|type=transcript|length=936bp|location=Sequence derived from alignment at sc0000458:94650..95585+ (Clytia hemisphaerica)
CGATTCTCATCaactgaccataaaacaaacaaaaaaatgaagattgtCAT
TGTCTCTCTTGCTCTCTTGGCTGGTAAGTTAAATctaaattcttgatatt
ttttatttaaagtaaTTTCAACCTTTGCTTAAACATTGAGCAACCTCTGC
GAGATACCTATCTATTGTAGGTATAAACTAGAGCATTTGTTTAACATTAG
AACTCcacaaaataataataataacaatctCTTTTCTATTACAGTTGCTG
CCGCCCTCAAAGTTGGAACCGAAACTGGTACCACACCACCAGCTGTCCCA
TGCCCAGACTCCCTCTGCCATGGAAAAGCCGACGGAAACTTCCAATACAT
CTACTATGGACGACTCAACAAAAACTACTTCCTCCAATGCTCAAACGGAT
TAGCTTACTGTCAAGCCTGCTGGCCATTGTCCTTGGAATTCAGTGAAAAC
TGCAACCAATGTTTGTACAGCAAACACGACGACTGTGTCACCACACAAAA
ATGGCACCCAGCCACCACCTTCGCTTGCCCAGACAAATGCCCAGCCCGTG
GACCACACTTCAGTGGAAACATTGAAGACCCACACAACCCACACCAATAC
ATCGCTTGCTTCCACGGACAAACTGTCGGATGCATCGCTTGCCCAAAGGG
ATTGGAATTCAACGAGAAATGGAACGCCTGTCTGTTCAAAGGAAAATTCA
AAACCGAGCCAGACcactaaatttatttttgaaaaacattttgtagtgat
tttttaaccaaaaacctaaaatctttAAATGCTAATTTTGTAACCTTATC
TTTTTTGCCTCTAACATCCTCACTTTTAtgctctttttttttaatttcta
atttttaataTCTGtcaaatttcttcttcttcaaatgTAAATCCTCACTG
TTCTTTCATCAAAATAAATCTCAATTTCAAATAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023679-exon-sc0000458-1491911889:94650..94722 | TCONS_00023679-exon-sc0000458-1491911889:94650..94722 | Clytia hemisphaerica | exon |
| TCONS_00023679-exon-sc0000458-1510915933:94650..94722 | TCONS_00023679-exon-sc0000458-1510915933:94650..94722 | Clytia hemisphaerica | exon |
| TCONS_00023679-exon-sc0000458-1575043694:94650..94722 | TCONS_00023679-exon-sc0000458-1575043694:94650..94722 | Clytia hemisphaerica | exon |
| TCONS_00023679-exon-sc0000458-1491911889:94894..95585 | TCONS_00023679-exon-sc0000458-1491911889:94894..95585 | Clytia hemisphaerica | exon |
| TCONS_00023679-exon-sc0000458-1510915933:94894..95585 | TCONS_00023679-exon-sc0000458-1510915933:94894..95585 | Clytia hemisphaerica | exon |
| TCONS_00023679-exon-sc0000458-1575043694:94894..95585 | TCONS_00023679-exon-sc0000458-1575043694:94894..95585 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000458 | supercontig | sc0000458:94650..95585 + |
Blast
The following BLAST results are available for this feature:
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