TCONS_00023490 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023490
Unique NameTCONS_00023490
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2811

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023490 ID=TCONS_00023490|Name=TCONS_00023490|organism=Clytia hemisphaerica|type=transcript|length=2811bp
tttgattcaaaatttaaaaagagaatatcaaacgagatattaatataaat
gcttgaatgatgaaaataaactaccgttataaaattttgattgatatGAT
CggataaaattattttcatttttgattattttatagAATAATTCTAAACA
ATACTACTAAACCACACAGAAAGGGGTTTCATTGACCTTTAGTATGAGAC
ATTGAGAAGTCATTATGGCATTTTAGAGGAACTTGAGAAATGATATGTTT
GGTGTTAGCAGAATTTTTTTCGTGTTATTGCTGATCCCAAACTGATATTT
TATCAAGGAGACATACTAAGTGGTACTTACTTTGGTTATTTGGAGAATTT
ACAAAACGATAGACAATAACGTAAACAACCATCATGGATTTCTTGAAATT
GGATATGAAGACATTATTGAGATCTGGAACAATAATGAATGCAAACGAAT
TGTATATCACACTTGCTGCCATTCAAGGCGAGTTACAAAATACAGTTGGC
GAGTTGTTTGCTATGTTTTGCCTCGAAAATAAAGATGGCGGGGAGAATCG
ACATGCAACACAAGCTTTCAGTACTATCTTGAAGAAATGTAAAGATTTGA
ATCAACTCGAAACGCTGGAATACGGTTTCATTAAAAATCGTATTTACGAT
ACCAATGATGAAGGAGAAATGGTATTACGAGAtgaaatcaatttgaaaat
tcTGGACACTTTATTTTTGTATGACTCAATGAAAAACTTGAAAGGTTTTC
CAACATTTCAGGAGAAATTACAACACAGACGCAGGCTAAAATCTTGTAAA
CAAGCTTTACATCAACAGTGTTGTTTAGCCTGTAACCAcaaatgtaaaaa
atgtgatAAGAAAGAATGTAAGGATGATTCTTGTCATCCAGgggctaaat
gtaatcaacacCCCTGTCGCAATTGTGACGAAACTAAGGAAATTTGTCTC
CATTCTTCAAGTATATGCTGCAAAAAATGTGAGACTTGTTTTTATTGTGG
CTCCAAAATGAAGTTAGAAGTTAGCGAACGGTGTAATAGACTACGGCTAA
CATGTGGACTTGAAACATTGAGAAAATTTCGACAACTTTTagagaaattg
acttttaaaGATTGTGAATTGTTGCTAGATGGTAAACATACCTTACCGGG
TTTCCAGCTCTGTAGAAGTTTCCGAGAACTTTCTGATTATTTGTTGAAAG
CTTATAAAGAAGTTTTGAATTATATGTCGATCGCAGAACATTTTATCAAA
CAACAACCTCTTTCTtctaaagatattcaaaagaaAGTTGACAGCCTGGC
TACAATTTTTAAAACGGAAGATCGTGATTGGCTGTTGTACATGCagcatg
atgacgtcattaagaTTTTAGGATTCATTAATGAAGCTAGAGCCCAACCC
TCTGAAGAATATCATTACGTCATcaataaaattgaagaattgaaatcagA
CGAGAAATTTAAGAGACACAGGAGTGAAGTTATGGTCGAACGTGAAAATG
GGGACTCTACTGGCAGCTTATCAAGAGATGTGAATTTTAACTTGGAAAGT
GTAACcataaatgaaattgaaaattctaaaagtgaAATCGAGACAAACGA
AAACGAAGTCTTCGAAACAGAGACTTTAAATGAACAGCTGATAAATAATG
ATTCACAACAACACGAGGAAGACGTAGCTGTTGCCAAGGTAACCGGAGAA
CATGAAGGCGAGGCTACATCAACTGATGTTACCGATTCAACAACTTTAAA
ACCtgaattaaaagaaaatgagggCACTGATGTCACCTCGGCAGATTTCC
GACCTGAAGAATCAGCAAGAAGCAAATGTGAATCTCCAGTCGATTATGAG
TTGAACAAACAACCAGATTCTAAAACGTCTATTCATTCTAGAACCGACCC
AGAAATGATTGAAGTCATCAACAACTTGCAACAATCAGTAGACGAGCTGA
AGGAAAGTTCAGTGACTTATCAAAAAGANTAACAACTTGCAACAATCAGT
TGACGAGCTGAAGGAAAGTTCAGTGACTTATCAAAAAGAACTGGATGAAA
AATTACAAACTTTTGAACTTGAACATATTGAAACATCATCTAACGTTGAG
GAAATGAACAATAAAGTGCTGAGTCAGCTTTCCGTTGTCATGGAGAAGTT
GGTTACCATGGAGGAGCAAAGAAAGGTCGAAGCGGAACGGCAACAAGCGG
AAATtgaagaaatcaagaaaaatcagaaaaagttgtTAGAGATGCTTGAA
AccaaacagaaagaaaaagCTTCCAAGAAGAAACATAATATTTTCAAGCA
CAAAGTCCACTAAAAGCAAGTTTACCAAAATCAATATGCTATCATCGTGC
AAATGAACAACTTCCCTGGTGAGAGGTATTATTATTAAGTGCAATGGCAA
ACACGGCGATCTTCAATCGGATTTATCGCATTcaataaaaagtttaattt
tggttgtgaagaaaaattaatgaagttgaaaaaaaggatttttcctTTAT
CCGATACAGAACAATTTAAATCGTAGGATAGAGTTATTTTATCGATACAc
tcttttttgtataaaaacgaTTATAGGCAAGCGATTATGTTAACTGGAAA
TTCGGTCTACTGTTTTCGAGGATCAATATGCCAAACGATAAGAACAGGTG
AGACTCAACTAAAATTTTAgtcgttcttataaagaaaagagTGTACTCAT
TTTTAGATTTGTAAAACTGAAattattttaatctaatgaaagAATTTTGT
GTTTATTTCTTagttatattttaattttattttagttaaaattttttagT
TCTGAATTTTT
Run BLAST on NCBI

protein sequence of TCONS_00023490-protein

>TCONS_00023490-protein ID=TCONS_00023490-protein|Name=TCONS_00023490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=532bp
MDFLKLDMKTLLRSGTIMNANELYITLAAIQGELQNTVGELFAMFCLENK
DGGENRHATQAFSTILKKCKDLNQLETLEYGFIKNRIYDTNDEGEMVLRD
EINLKILDTLFLYDSMKNLKGFPTFQEKLQHRRRLKSCKQALHQQCCLAC
NHKCKKCDKKECKDDSCHPGAKCNQHPCRNCDETKEICLHSSSICCKKCE
TCFYCGSKMKLEVSERCNRLRLTCGLETLRKFRQLLEKLTFKDCELLLDG
KHTLPGFQLCRSFRELSDYLLKAYKEVLNYMSIAEHFIKQQPLSSKDIQK
KVDSLATIFKTEDRDWLLYMQHDDVIKILGFINEARAQPSEEYHYVINKI
EELKSDEKFKRHRSEVMVERENGDSTGSLSRDVNFNLESVTINEIENSKS
EIETNENEVFETETLNEQLINNDSQQHEEDVAVAKVTGEHEGEATSTDVT
DSTTLKPELKENEGTDVTSADFRPEESARSKCESPVDYELNKQPDSKTSI
HSRTDPEMIEVINNLQQSVDELKESSVTYQKX
Run BLAST on NCBI

transcript from alignment at sc0000455:80812..91270+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023490 ID=TCONS_00023490|Name=TCONS_00023490|organism=Clytia hemisphaerica|type=transcript|length=10459bp|location=Sequence derived from alignment at sc0000455:80812..91270+ (Clytia hemisphaerica)
tttgattcaaaatttaaaaagagaatatcaaacgagatattaatataaat
gcttgaatgatgaaaataaactaccgttataaaattttgattgatatGAT
CggataaaattattttcatttttgattattttatagAATAATTCTAAACA
ATACTACTAAACCACACAGAAAGGGGTTTCATTGACCTTTAGTATGAGAC
ATTGAGAAGTCATTATGGCATTTTAGAGGAACTTGAGAAATGATATGTTT
GGTGTTAGCAGAATTTTTTTCGTGTTATTGCTGATCCCAAACTGATATTT
TATCAAGGAGACATACTAAGTGGTACTTACTTTGGTTATTTGGAGAATTT
ACAAAACGATAGACAATAACGTAAACAACCATCATGGATTTCTTGAAATT
GGATATGAAGACATTATTGAGGTAGGTGGTGAAAGACAATGGAAGAGAAT
ATAGATTGAATATTTAAACTTCTCTTAGAGGATTgttaaatacacccctg
ttttacagccccggtggaactttttacctcagtggggataagaactaatt
ttcaaatcccactggggatagaaattctattgttccaaggctaGAAAAAC
CCGGTGAGGGAtaggtttggagtgcaatttttaaactttgtgatgaaatc
aaagtcattttcctagtggggctgaaatttcagggtatctttttaccggg
gacaaaatttttgcctaattttccagtggggtatTTAAATATGGCTATGG
GGTAGAGGACctatttttaactttcttttggAAACTTTAGATAATCTCTT
AGTCACTTTACTCTATGAAgaaacccccttctcacagacccagtagaaCT
TTTTCAACCAGTTGGGTTAGTTGCTTTATACACTGAAAGTCGATGAGGAT
TTGAGTTCCGTGGAATAAATAGCATAATAGTTTGCAGCCAGAATTTCTTT
ATTACAATGATGGTGAAAGCCTATtaagaatttagcttatttccttgttt
ttcgaaatttggaattcgggcgaaaaagtcgattttgggccatttcttaa
atttaatcggatatttcaatttggctcgggtttatagacttccaggctat
attatgagccttattggaccctttttgattttttgaatcctcagatccta
aggtcctaagttttaagtctcatgttaaaaatcagagttaaaactctacc
cttccaacctaagttagagcgcttccaaaccgattgtggttataagattt
cgtgggaatttccctttttttctcaaatattacgaccatgattgtaaata
attttcaaCGGGGACTAAAATGGCTGCAGTATCTTAGCCCAACCAGGTCT
GTAAGAAGGGGTGTATGAAAGTTTTCTCCGAAAAAAAAGCAATAAACAGC
CCAAAAAATTAACCAAATTGGCTTAAATGTTGTCAAAACTTAAAGATTGA
CCATTCTTCAATTTCTAGTGGTATGTACTTTCCCGTCTCCCCCAAGATGA
GCACCCTCCTATGAACAGATTTTAAAATTGGTGTTAGATGTAAAATGACC
TGTAGAGGTACTTTACTTTAGTAATTCGAGACATATCTCAAAGAAAACTC
TGATAGTTGTTAGAAGGGTGCTATAAGATGTGAGAGTCCACTCgccaata
aaaatatttatgcTTTAACACGATATATCTTGTTTGTTTTAACGTCATTG
GTCTTATAATCATAGGAAATAAATAGAACTTGACATTTGAAATACCTAAA
TTTGTTTTTCTCGTATGGTCATATACGTCAAAGCAATAttagatttttga
tattttgaaagcGTAAGCCAAGGTAGGGCAGGTAGAAATTCACAAATAGA
GATTTATATGTTCTTTTGGATGtagagttttgatttttcaattttacttt
ttgtttttgaagtaGATAACACcgccctcttctcacagacccagtggtcT
GTAGGGGTATAAATAGcgaactgaaactcgatggggatcgatATTCCCTT
AACTTTTATGACCAGGGattcaaattcttttgttttaaagtcagAAAAAT
TCAGTATGGATGGTAAAGTGGGGACGAAAATGggggtataattttccacc
gggaacgatattttggccaatttttccagtggggagggttggcagtgggt
ctgtgagaagagggtgtggTAGAGAGAGAGGCTTAACTTTTCAATATCCA
TCCTCTCGATCCATCATAGGGAATAAGGTAGCCATCTCTGATACATCCTA
TCAACCCTTTCTAAAAGATCCCTGTAAAGGGATTGGATTCGAGTTTGCCA
GGATCGTCAAATGTGTGAAGTTATTGAATTTGTGTACTCACCCAAATACT
GATATTTTGCAGTCATTTGACTCTGGCTTAATTAAACCCAGTTTTCTTGT
GACGCTAGGATTATTGGGTTTATTGAAAACCTTAATGGTGTAAATAACTC
AATCTTTTTAGAATATAGCGTGGAAACTCTTTAACTTAAACCACTATAAC
TCAAATGCCTTCTTATAGAGAACAAGCTTTCTAGTTCCTTCAATTAACAA
AACCTCACTCGATATCTCGagatttttttaactcaaacctTATTGCGTTC
CTCATCTTCGAAATGTGGAGACTCCGCACGCTTAATTTGCTCTCTGTTAC
TCGTCCTTGACAGAGTTCACAAATTTGTCAGAGTTAAAACCACACTTTTA
AAGGCTGATAGATATATTATAGATAGATTCTAGTTACAGAGGTTCGACCT
ATGGAGAGCGTCTACCATATTATTGTCCTATAATGTCCTTTTTTTATAGA
TCTGGAACAATAATGAATGCAAACGAATTGTATATCACACTTGCTGCCAT
TCAAGGCGAGTTACAAAATACAGTTGGCGAGTTGTTTGCTATGTTTTGCC
TCGAAAATAAAGATGGCGGGGAGAATCGACATGCAACACAAGCTTTCAGT
ACTATCTTGAAGAAATGTAAAGATTTGAATCAACTCGAAACGCTGGAATA
CGGTTTCATTAAAAATCGTATTTACGATACCAATGATGAAGGAGAAATGG
TATTACGAGAtgaaatcaatttgaaaattcTGGACACTTTATTTTTGTAT
GACTCAATGAAAAACTTGAAAGGTTTTCCAACATTTCAGGAGAAATTACA
ACACAGACGCAGGCTAAAATCTTGTAAACAAGCTTTACATCAACAGTGTT
GTTTAGCCTGTAACCAcaaatgtaaaaaatgtgatAAGAAAGAATGTAAG
GATGATTCTTGTCATCCAGgggctaaatgtaatcaacacCCCTGTCGCAA
TTGTGACGAAACTAAGGAAATTTGTCTCCATTCTTCAAGTATATGCTGCA
AAAAATGTGAGACTTGTTTTTATTGTGGCTCCAAAATGAAGTTAGAAGTT
AGCGAACGGTGTAATAGACTACGGCTAACATGTGGACTTGAAACATTGAG
AAAATTTCGACAACTTTTagagaaattgacttttaaaGATTGTGAATTGT
TGCTAGATGGTAAACATACCTTACCGGGTTTCCAGCTCTGTAGAAGTTTC
CGAGAACTTTCTGATTATTTGTTGAAAGCTTATAAAGAAGTTTTGAATTA
TATGTCGATCGCAGAACATTTTATCAAACAACAACCTCTTTCTtctaaag
atattcaaaagaaAGTTGACAGCCTGGCTACAATTTTTAAAACGGAAGAT
CGTGATTGGCTGTTGTACATGCagcatgatgacgtcattaagaTTTTAGG
ATTCATTAATGAAGCTAGAGCCCAACCCTCTGAAGAATATCATTACGTCA
TcaataaaattgaagaattgaaatcagACGAGAAATTTAAGAGACACAGG
AGTGAAGTTATGGTCGAACGTGAAAATGGGGACTCTACTGGCAGCTTATC
AAGAGATGTGAATTTTAACTTGGAAAGTGTAACcataaatgaaattgaaa
attctaaaagtgaAATCGAGACAAACGAAAACGAAGTCTTCGAAACAGAG
ACTTTAAATGAACAGCTGATAAATAATGATTCACAACAACACGAGGAAGA
CGTAGCTGTTGCCAAGGTAACCGGAGAACATGAAGGCGAGGCTACATCAA
CTGATGTTACCGATTCAACAACTTTAAAACCtgaattaaaagaaaatgag
ggCACTGATGTCACCTCGGCAGATTTCCGACCTGAAGAATCAGCAAGAAG
CAAATGTGAATCTCCAGTCGATTATGAGTTGAACAAACAACCAGATTCTA
AAACGTCTATTCATTCTAGAACCGACCCAGAAATGATTGAAGTCATCAAC
AACTTGCAACAATCAGTAGACGAGCTGAAGGAAAGTTCAGTGACTTATCA
AAAAGANTAACAACTTGCAACAATCAGTTGACGAGCTGAAGGAAAGTTCA
GTGACTTATCAAAAAGAACTGGATGAAAAATTACAAACTTTTGAACTTGA
ACATATTGAAACATCATCTAACGTTGAGGAAATGAACAATAAAGTGCTGA
GTCAGCTTTCCGTTGTCATGGAGAAGTTGGTTACCATGGAGGAGCAAAGA
AAGGTCGAAGCGGAACGGCAACAAGCGGAAATtgaagaaatcaagaaaaa
tcagaaaaagttgtTAGAGATGCTTGAAAccaaacagaaagaaaaaggTA
TTTTATCTTCATGTTTCTAAATTTCCTCACTTTTTAGATACTTAACTTGC
ATGATAAAGTATGCTAAAGACTTTTCATCTATTGATGTCCTTCGCGTTGA
TCTTACATATGCTCACATACACTTTTTGCAATGAACCCAGGGTACTGCGT
TTCTCGACGTTTGCAAGGTAACAGGTATGTCcgagtcaaaaatcaaaaat
caatacCATTTAACGGAGAGAAagatttgacatttttgagaccTTTTGAG
GAGACTTGAAAAagggtacccttatggctctcACATCACATACCCCTAAC
CTGTACTCCCCTCCCCTGCAATTAACTTCTAAACACAACTTAAACCAAAA
CACTCAGATCCTTAGTTTTTGCGTGTTATTGATAATTACTGTCATGACGA
GTCTTTATCCATTCATTGTAcctaaattttgactttcatTCGACATTCAA
TTCGAAATCCATACACTCATCATATATTCACACCTTTATCCCAATTTTAT
TTATAGCTTCCAAGAAGAAACATAATATTTTCAAGCACAAGTAAGTATAC
ACTTGAACCAATATTTTTCGTTCTAGACCAAACAGCTTTTGCGTCCGGAA
AATGATTTGTGGGCCTTCAAGGTTTGAAACTTGAGCTTCTTCATGCCGCA
CTATTATTACAACCATTCACTTGACTAGATAAGATCATATCAAACTGAAG
TTAAAAAATCAGTGGATAAGAAATTCTATCCTCTTTGGCTTCAGGGCACT
GACTAAGCACCCTCCACCCACAAACTCGATATTTTCTTGTGTATTGCATA
AGTCATGATAAaacaatttctaaaaaatcctatccttagaccatgttcag
acgttacggttccgtatcgttccgtatcgttccgaaacaaaacggttccg
aaacaagtgtgaacgtcaaaattcgaaacgtcagaAAAGAaaacgttaca
aagcaaaacagattgaAAAGGTTTCGCTTtgttcatcggaacggaactgc
tccgttttcttgctccgaaacgttccgaaaccaatatgaacataCACTCG
ATTCGTAAAATTATACCGGAGcgagtaacgtgtgaacatggtcttagcag
agatttgggaaaagaggataagaaacgccgctgccgctcgctgttttcct
attctttccctttgaattcggcaccctttgaagaagcaaggctgcagaat
agttgagcaagaaggaaggccgaaacaaaatggcgttacgtacaggttaa
ccaatgttcaagaaaaaagtccTTGAATAAAGCTTTCCACTGAGTTCTTT
GTGAAAAAGAGACTGGGGAGTGAATCTTTGATCTTCTGGGGGTTTCCCCT
gagaaaatcgaggaaaatTATTCTATATTCTGGGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCGACATGT
GATATTTATAAAGTCTGACTATTGATGGGCCATGATTTTGACCGGTCAGT
GGATTGACTCACAAGGCTTGGACAATTTTGCAGCCAAGACATAATTTCAT
CGGTGAACTTTACAGTCTGTGTTAGGGTAATTAATTCATGCAGATTATTG
CTTATACGAAAACAAAAAAGCCCTAGTTTTAcagtagattttcattttat
atattttcagggCTAGTTATCGTCATTTTCTCTATGAAATACCTATTGTT
TATAACAACGCTACCCAGAAAAACCATTCCACAGAAAGTTAAGTATGGGC
TATTGGCCATCCAAGCACTGGTGCAATGAAGTAAAGATTGACTCAGGATG
ACtcaacatttttgcattttgaccGTCACGTTAAGGCATGGAAAAGTCtg
ccaaaaaatgaaattaaacctGCAGAACCTATATTACGTGCATTATTTAG
CTTGACcaaaacagaatggaataataAATATATGCAGAGGATGTTAATAT
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCTTAGTTGAGGAA
TATACTAAACACTTTTCCTTTAAACTGCTCTGAGTAACTACAATTAGTAT
AGTTTTGTTAGTTTTTGGGGATGatccaaaaataaaatataaaatataga
aatatatAGCTCAAAGTGTCGTAAGTTGTAACCACTGGCAaatgccaaaa
tatttcttcgaCTGACTATAACTTTTCATGGTGTCATCTTCTTTTCTTCA
GAGTCCACTAAAAGCAAGTTTACCAAAATCAATATGCTATCATCGTGCAA
ATGAACAACTTCCCTGGTGAGAGGTATTATTATTAAGTGCAATGGCAAAC
ACGGCGATCTTCAATCGGATTTATCGCATTcaataaaaagtttaattttg
gttgtgaagaaaaattaatgaagttgaaaaaaaggatttttcctTTATCC
GATACAGAACAATTTAAATCGTAGGATAGAGTTATTTTATCGATACActc
ttttttgtataaaaacgaTTATAGGCAAGCGATTATGTTAACTGGAAATT
CGGTCTACTGTTTTCGAGGATCAATATGCCAAACGATAAGAACAGGTGAG
ACTCAACTAAAATTTTAgtcgttcttataaagaaaagagTGTACTCATTT
TTAGATTTGTAAAACTGAAattattttaatctaatgaaagAATTTTGTGT
TTATTTCTTagttatattttaattttattttagttaaaattttttagTTC
TGAATTTTT

Coding sequence (CDS) from alignment at sc0000455:80812..91270+

>TCONS_00023490 ID=TCONS_00023490|Name=TCONS_00023490|organism=Clytia hemisphaerica|type=CDS|length=3198bp|location=Sequence derived from alignment at sc0000455:80812..91270+ (Clytia hemisphaerica)
ATGGATTTCTTGAAATTGGATATGAAGACATTATTGAGATCTGGAACAAT
AATGAATGCAAACGAATTGTATATCACACTTGCTGCCATTCAAGGCGAGT
TACAAAATACAGTTGGCGAGTTGTTTGCTATGTTTTGCCTCGAAAATAAA
GATGGCGGGGAGAATCGACATGCAACACAAGCTTTCAGTACTATCTTGAA
GAAATGTAAAGATTTGAATCAACTCGAAACGCTGGAATACGGTTTCATTA
AAAATCGTATTTACGATACCAATGATGAAGGAGAAATGGTATTACGAGAt
gaaatcaatttgaaaattcTGGACACTTTATTTTTGTATGACTCAATGAA
AAACTTGAAAGGTTTTCCAACATTTCAGGAGAAATTACAACACAGACGCA
GGCTAAAATCTTGTAAACAAGCTTTACATCAACAGTGTTGTTTAGCCTGT
AACCAcaaatgtaaaaaatgtgatAAGAAAGAATGTAAGGATGATTCTTG
TCATCCAGgggctaaatgtaatcaacacCCCTGTCGCAATTGTGACGAAA
CTAAGGAAATTTGTCTCCATTCTTCAAGTATATGCTGCAAAAAATGTGAG
ACTTGTTTTTATTGTGGCTCCAAAATGAAGTTAGAAGTTAGCGAACGGTG
TAATAGACTACGGCTAACATGTGGACTTGAAACATTGAGAAAATTTCGAC
AACTTTTagagaaattgacttttaaaGATTGTGAATTGTTGCTAGATGGT
AAACATACCTTACCGGGTTTCCAGCTCTGTAGAAGTTTCCGAGAACTTTC
TGATTATTTGTTGAAAGCTTATAAAGAAGTTTTGAATTATATGTCGATCG
CAGAACATTTTATCAAACAACAACCTCTTTCTtctaaagatattcaaaag
aaAGTTGACAGCCTGGCTACAATTTTTAAAACGGAAGATCGTGATTGGCT
GTTGTACATGCagcatgatgacgtcattaagaTTTTAGGATTCATTAATG
AAGCTAGAGCCCAACCCTCTGAAGAATATCATTACGTCATcaataaaatt
gaagaattgaaatcagACGAGAAATTTAAGAGACACAGGAGTGAAGTTAT
GGTCGAACGTGAAAATGGGGACTCTACTGGCAGCTTATCAAGAGATGTGA
ATTTTAACTTGGAAAGTGTAACcataaatgaaattgaaaattctaaaagt
gaAATCGAGACAAACGAAAACGAAGTCTTCGAAACAGAGACTTTAAATGA
ACAGCTGATAAATAATGATTCACAACAACACGAGGAAGACGTAGCTGTTG
CCAAGGTAACCGGAGAACATGAAGGCGAGGCTACATCAACTGATGTTACC
GATTCAACAACTTTAAAACCtgaattaaaagaaaatgagggCACTGATGT
CACCTCGGCAGATTTCCGACCTGAAGAATCAGCAAGAAGCAAATGTGAAT
CTCCAGTCGATTATGAGTTGAACAAACAACCAGATTCTAAAACGTCTATT
CATTCTAGAACCGACCCAGAAATGATTGAAGTCATCAACAACTTGCAACA
ATCAGTAGACGAGCTGAAGGAAAGTTCAGTGACTTATCAAAAAGANTAAA
TGGATTTCTTGAAATTGGATATGAAGACATTATTGAGATCTGGAACAATA
ATGAATGCAAACGAATTGTATATCACACTTGCTGCCATTCAAGGCGAGTT
ACAAAATACAGTTGGCGAGTTGTTTGCTATGTTTTGCCTCGAAAATAAAG
ATGGCGGGGAGAATCGACATGCAACACAAGCTTTCAGTACTATCTTGAAG
AAATGTAAAGATTTGAATCAACTCGAAACGCTGGAATACGGTTTCATTAA
AAATCGTATTTACGATACCAATGATGAAGGAGAAATGGTATTACGAGAtg
aaatcaatttgaaaattcTGGACACTTTATTTTTGTATGACTCAATGAAA
AACTTGAAAGGTTTTCCAACATTTCAGGAGAAATTACAACACAGACGCAG
GCTAAAATCTTGTAAACAAGCTTTACATCAACAGTGTTGTTTAGCCTGTA
ACCAcaaatgtaaaaaatgtgatAAGAAAGAATGTAAGGATGATTCTTGT
CATCCAGgggctaaatgtaatcaacacCCCTGTCGCAATTGTGACGAAAC
TAAGGAAATTTGTCTCCATTCTTCAAGTATATGCTGCAAAAAATGTGAGA
CTTGTTTTTATTGTGGCTCCAAAATGAAGTTAGAAGTTAGCGAACGGTGT
AATAGACTACGGCTAACATGTGGACTTGAAACATTGAGAAAATTTCGACA
ACTTTTagagaaattgacttttaaaGATTGTGAATTGTTGCTAGATGGTA
AACATACCTTACCGGGTTTCCAGCTCTGTAGAAGTTTCCGAGAACTTTCT
GATTATTTGTTGAAAGCTTATAAAGAAGTTTTGAATTATATGTCGATCGC
AGAACATTTTATCAAACAACAACCTCTTTCTtctaaagatattcaaaaga
aAGTTGACAGCCTGGCTACAATTTTTAAAACGGAAGATCGTGATTGGCTG
TTGTACATGCagcatgatgacgtcattaagaTTTTAGGATTCATTAATGA
AGCTAGAGCCCAACCCTCTGAAGAATATCATTACGTCATcaataaaattg
aagaattgaaatcagACGAGAAATTTAAGAGACACAGGAGTGAAGTTATG
GTCGAACGTGAAAATGGGGACTCTACTGGCAGCTTATCAAGAGATGTGAA
TTTTAACTTGGAAAGTGTAACcataaatgaaattgaaaattctaaaagtg
aAATCGAGACAAACGAAAACGAAGTCTTCGAAACAGAGACTTTAAATGAA
CAGCTGATAAATAATGATTCACAACAACACGAGGAAGACGTAGCTGTTGC
CAAGGTAACCGGAGAACATGAAGGCGAGGCTACATCAACTGATGTTACCG
ATTCAACAACTTTAAAACCtgaattaaaagaaaatgagggCACTGATGTC
ACCTCGGCAGATTTCCGACCTGAAGAATCAGCAAGAAGCAAATGTGAATC
TCCAGTCGATTATGAGTTGAACAAACAACCAGATTCTAAAACGTCTATTC
ATTCTAGAACCGACCCAGAAATGATTGAAGTCATCAACAACTTGCAACAA
TCAGTAGACGAGCTGAAGGAAAGTTCAGTGACTTATCAAAAAGANTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013206XLOC_013206Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023490-proteinTCONS_00023490-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023490-exon-sc0000455-1491911889:80812..81232TCONS_00023490-exon-sc0000455-1491911889:80812..81232Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1510915933:80812..81232TCONS_00023490-exon-sc0000455-1510915933:80812..81232Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1575043694:80812..81232TCONS_00023490-exon-sc0000455-1575043694:80812..81232Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1491911889:83611..85458TCONS_00023490-exon-sc0000455-1491911889:83611..85458Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1510915933:83611..85458TCONS_00023490-exon-sc0000455-1510915933:83611..85458Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1575043694:83611..85458TCONS_00023490-exon-sc0000455-1575043694:83611..85458Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1491911889:85968..86001TCONS_00023490-exon-sc0000455-1491911889:85968..86001Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1510915933:85968..86001TCONS_00023490-exon-sc0000455-1510915933:85968..86001Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1575043694:85968..86001TCONS_00023490-exon-sc0000455-1575043694:85968..86001Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1491911889:90763..91270TCONS_00023490-exon-sc0000455-1491911889:90763..91270Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1510915933:90763..91270TCONS_00023490-exon-sc0000455-1510915933:90763..91270Clytia hemisphaericaexon
TCONS_00023490-exon-sc0000455-1575043694:90763..91270TCONS_00023490-exon-sc0000455-1575043694:90763..91270Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000455supercontigsc0000455:80812..91270 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	1.32304	1.56991	0.512516	0.953989	0.224699	0.536057	12.4177	11.9405	6.4866	2.69378	2.05224	2.74542	1.14742	2.04999	1.29768	2.57967	0.587155	0.932302	2.83188	2.3727	5.00551	4.80936	2.94663	1.90519
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023490 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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