TCONS_00023407 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023407
Unique NameTCONS_00023407
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1205

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023407 ID=TCONS_00023407|Name=TCONS_00023407|organism=Clytia hemisphaerica|type=transcript|length=1205bp
aaaagaaaatgattaaaaaaaattgactaaggTAGCAAATTGTATTAACT
TATGAGTAAACCATGAGTCATTTTAGTACCCAGGTACTTTCTTTTTGTTC
GGTAAACAAAAGATCTGTATTTTGATTGGATGATGCAGGTACCACGTGAG
TATCTATTGTCCAATAGTACTTATACAACAGCACACCCTTCAGAAGTCAT
TCAAGTTTGAAGCATTGGTATTGAAAGGGTCTCTTCAAGAAACTTTAAAG
CAATCGAAGAATAACCTTTTCAAGTATCATGGCATCTTATAAATCTTTAT
TAGCGCTCTGCGCTCTGATTGGCTGCACTATGGCTATGACTCAACCTATG
TTTGGTGATGGCTCAGTCGGTGCCGCATTTGAAACACTGTGTGACGACAC
ACACTTTGCAGTCTGGTTTAACAAAACCGCTTTGGATGAAAGACAAGATG
GTACCAACAACAACCGAACATGGCAAATCTATTTCGAAGGTCAACGAGAT
GATGCCACCTGTACAACATACCATTGGGATACCAGCAAAAACGATGCCAA
CTATAATAGCCTTTCAAACCCTGCAGCTACCCTTCCATCTAGTGTCCAAA
TCGGTGCACCAGTCAAAAACTGTGGAATCAACGTTTTTGCTGATGCAACA
CACATTATCTACAACACAACACTTATTGTTACATACGGTCAAAATCCAAA
TGCTGATATCGGACGTGAAGAGTATGACAAATACAATGTCATGTGCTTGA
GAAATCGAACCGTTAACGAAATGGTCAACTTTAATGTTACCTTCCGTCAA
ACTGGAAATGACGCCAAGAACGATACCGAGGATTACAGTTTCACTTTCAC
CCACACCAATATGGCTAATACCCCTACAACAGTCTACAAACTTGGAGACT
acatcaaattcaaaatggacTCAAACACCGCGCAAACTGAAGTAAAAGCT
GTGATCCAAAGATGTTGGANCAGTCTACAAACTTGGAGACTacatcaaat
tcaaaatggacTCAAACACCGCGCAAACTGAAGTAAAAGCTGTGATCCAA
AGATGTTGGACTACCACTGACGGATCAGCCAACTCGTACACTTTGATCAC
CAACAGatGTGACATGGAAACTGGAACTAGCTGGGTTAGTAATCCAAGTG
ACGCTGAGTCTGTCTTCAAAACCGAAGCTTTCAGATACTTGGCTGCCTCT
GAANN
Run BLAST on NCBI

protein sequence of TCONS_00023407-protein

>TCONS_00023407-protein ID=TCONS_00023407-protein|Name=TCONS_00023407-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
MASYKSLLALCALIGCTMAMTQPMFGDGSVGAAFETLCDDTHFAVWFNKT
ALDERQDGTNNNRTWQIYFEGQRDDATCTTYHWDTSKNDANYNSLSNPAA
TLPSSVQIGAPVKNCGINVFADATHIIYNTTLIVTYGQNPNADIGREEYD
KYNVMCLRNRTVNEMVNFNVTFRQTGNDAKNDTEDYSFTFTHTNMANTPT
TVYKLGDYIKFKMDSNTAQTEVKAVIQRCWXSLQTWRLHQIQNGLKHRAN
Run BLAST on NCBI

transcript from alignment at sc0000453:265243..276563+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023407 ID=TCONS_00023407|Name=TCONS_00023407|organism=Clytia hemisphaerica|type=transcript|length=11321bp|location=Sequence derived from alignment at sc0000453:265243..276563+ (Clytia hemisphaerica)
aaaagaaaatgattaaaaaaaattgactaaggTAGCAAATTGTATTAACT
TATGAGTAAACCATGAGTCATTTTAGTACCCAGGTACTTTCTTTTTGTTC
GGTAAACAAAAGATCTGTATTTTGATTGGATGATGCAGGTACCACGTGAG
TATCTATTGTCCAATAGTACTTATACAACAGCACACCCTTCAGAAGTCAT
TCAAGTTTGAAGCATTGGTATTGAAAGGGTCTCTTCAAGAAACTTTAAAG
CAATCGAAGAATAACCTTGTGAGTTtgatatattatattttttttggttc
ttttaaagatttttaggGTAAGCTcgcaacccagctggcacacgacgttg
tttcaacgttcatctaacgttatatggatgttgtgaacgttagaaaaacg
ttgaagcaacgttgtCTGCCAGCTGGGAATGTATGTATTGAAATACAGTA
ATTTTATACACCATCCTACAACCCTTTAACTCTATAATATGTTTAACGTT
TGTTGAAATACCGTCAGATTCAGAACTGACGTGCATTGAAAAGGCCGACG
ATTTCGCTTGTCCATACATTGCTAGCTTGCTaagatttttagttttgatt
ttattattaNCGCTTGTCCATACATTGCTAGCTTGCTAAgatttttagtt
ttaattttatggtgaattcttttttgaaattgttgaccgtaatggatttt
ttttgtttttttcaaagtgTCTTTTTCAAACACGTTTTTTGGTCTGAAGC
TTTGGAGATTCTAATGTGTAATTGGGCCGAGAAGATCACAGttaatattt
agaattttttctttatcttcAAATTACATAAACGTtattaaagtaaaata
aaattgaaggaTCTTTGACCATAACATTGGAAAAAAGGGCGTGGTAGAAA
AAATGAAGCTCGATGCCACCCACGATTAGTATTTTTTTCGCGCCTAACTA
ATTCTTGAATGTATATTAGATGTACAGGAAAATCACTGGACGAAAAGGTC
TCATTTAATATTATCTTTCTTTTAGTTCAAGTATCATGGCATCTTATAAA
TCTTTATTAGCGCTCTGCGCTCTGATTGGCTGCACTATGGCTATGACTCA
ACCTATGTTTGGTGATGGCTCAGTCGGTGCCGGTAAGTTTGATTACCCAT
AATCCAACTCAATGATGCAGACAAataattaagtttttttttTATTTTAA
AGGGACATAAAAGTAGTAAAATGTAAACATTGCGCGAACCacgtgtcatt
aaagagaacaattaaaatcacgtgtccaaaacaaacttgtaaaacgattg
aacaatcaaaattagccatatttggtttgattctttattttgacatgtga
tgtttgatttgattttgtatccgctgcatacagtttgtttacaaatttcg
caagtactgttatgtccctttaaccaCGAAGTTGAGGTTTTAGTGTTCTG
TAGATATTTGGTTTGTGAGACATTGTGTTGTCTGATACATATATCAAGGT
CCTTCTTATGTCTGATACTGTTTAaaacatccctgtgtcacagacccact
gggaacccagCCCCACTAGGAAAATTAGAagaaatttcgtccccggtggg
aaaagaCTCTGAAATTTCTTCGCCACTGGGATATTGATCTTGAATTCTTC
AAAaccttcaaaaccatccccactggatttcttAATCAAGGAattaacaa
tagaatttctatctctATTAAGATTTCGATAGGAATTTTTACCCTActag
aaaaagttccaccggggctatgTGAGACAGAGGTGTTTTGAAAAGACGAG
AGAAGCAGTTTTAATCTAGAGTTCGATGCCTGTCTCTGCTTACACTTTTT
TCATGCAGTTAAGCTTAGATCACGTGAAATGAAATTAGGCAACCCTATAG
AGTGTCTCATCACTGGCTTGTAACCTAAGTATGTTGCAAGAAACAGAAAT
ATAGAAGGTTTTCTCGATTATGTCTTGTAGCATTTGAAACACTGTGTGAC
GACACACACTTTGCAGTCTGGTTTAACAAAACCGCTTTGGATGAAAGACA
AGATGGTACCAACAACAACCGAACATGGCAAATCTATTTCGAAGGTCAAC
GAGATGATGCCACCTGTACAACATACCATTGGGATACCAGCAAAAACGAT
GCCAACTATAATAGCCTTTCAAACCCTGCAGCTACCCTTCCATCTAGTGT
CCAAATCGGTGCACCAGTCAAAAACTGTGGAATCAACGTTTTTGCTGATG
CAACACACATTATCTACAACNaacaatcccacaatgcatcgcatttttag
aaaaatcaaaaactccgataagatctatttccttaaatttaaagggtttt
ttttaaacaaagttgatattgtttgcttagTCATCAATTTTTCACATTAT
AGTAAAGATTTCTACCTTTTTATACCTTATCATCAAGTTTTgatataaaa
ttgtttttgatcCCACCATGGTTTTTACGGCTTGTTTGTGCAAAACATTT
TAATCTAGATTTCTCTAGCTCTCTTCTGCTTATAtgttttattacttttt
aacaATCTGGTTTTTAAAACTATTAAGTGCGTTcagcacccccccccccc
tgcgggGTTCTAGGGCTGCTAGCTGATAGGAGGGTCCCGCCCGACTTTCG
ATCCTTGGACTTTTACCCaaactaaaaaagagaaaaaaaaggacaatttt
gtgaattttgcgACCTTATTAGGACAAATTTTGACTAAATTCCGATCTTT
CCGgtggtaaaaagttgaaattctcctatttttccgacctttAGTGGGAC
TAAAGTttgactttctgatttttccaacccttagcgggactttgcaACTC
TAAAAAATGTACCCTTACCGTTCCCtctatttgcctaagtaccccccccc
atCCCCGGGTCCACGCCCAAATTAGTTAGAcaatcctatcgtctacacaa
gatcactaaaaaagggaatagtttaggaggtgggataaatttgaaaacgg
tgGTTAGCCttgggtggagtaagcagtggcgaaGGAAAATAGTGTTCACG
TAAAATAAACTAACATTAGACCTTTTGAAGAAAGATGTTCGAAAAGGGTC
AGAATGTATGAATAGTAAATTTTCATcagattttgacttaaaataATTTC
CTTCTTTCTTTCAGGTTTCGAAGTTAAGTGTGACGACACACACTTTGCTG
TCTGGTTTAACAAAACCGCTTTGGATGAAAGACAAGATGGTACCAACAAC
AACCGAACATGGCAAATCTATTTCGAAGGTCAACGAGATGATGCCACCTG
TACAACATACCATTGGGATACCAGCAAAAACGATGCCAACTATAATAGCC
TTTCAAACCCTGCAGCTACCCTTCCATCTAGTGTCCAAATCGGTGCACCA
GTCAAAAACTGTGGAATCAACGTTTTTGCTGATGCAACACACATTATCTA
CAACACAACACTTATTGTTACATACGGTCAAAATCCAAATGCTGATATCG
GACGTGAAGAGTATGACAAATACAATGTCATGTGCTTGAGAAATCGAACC
GTTAACGAAATGGTCAACTTTAATGTTACCTTCCGTCAAACTGGAAATGA
CGCCAAGAGTAAGTTCAAATTCATTCTTTGTCACGAAAGTCACTAAAAAT
CGAAGGAAAACAAACACTTCATGGTTCacggtttttataagaacaaacta
tataggaacataaggcttcgtttgtcaaaatacacgtttttttaatataa
ggaacacgtttataaggaactcgaggctgaaaatggtccaaaaaataagc
aattgtttaggaactgctcaggctgagaataaaaaaacaagttttNNNNN
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NNNNNNNNNNNNNNNNNNNNNCTGATGAcccggggggcactcgattttga
aaacgaccgtaagTTCGGCCAAAactcaggtctctaaaatcggacccttg
cagtgcaggaaaaaattagctgaaaatcgacccttattgtgcaatttttc
aaaaaattttgacatttcTCAAATtctacacccttacagtgcactttttc
tcacttgctcacaaatcaacccttaaagtgcactttccaagtccaaaaac
ctacccttaagggccgcacgtccggtaggtcacttacctggagtgccccc
cccctccTCAGAGCTGATGTAAGCAAAAAGTAGTTTTTtgctctttctga
ccaatcttgctccacatccatgtcaatccaatgtgaaaaagcttgtgaaa
taaaattgatgatcaagcaaacgatatcactcttatctaaaaacaaaaca
ttcaattttcacaatcaaaaattgaataaaattaagttgtttttcaaaat
ttattagcCAGATATTCTGATATTGAAATGCAAATCACTTAAGAAAGACC
AGACGGTAGACTAGGAACATCAATAAAGATATATTCACAGACTGGATATT
CAGGCTatcgtttttattgaaatatgaaattatcGAATCTGTACGTACAG
TTTTGTACaactgttttttttgtaaacaagTGTCTGTAAAAGTGTTGAAA
AACTTTGTTGAAGAGAAGTCATTATTGATcgtagtttttttgaaagtgat
accTACAAAGAAGCCATTGTGTAGTGCTAAAATTTTGCCTAAGTGAACTA
CATCACTTGTGTAGAAGCAAAAGTAGATCTAGCAATCTTGAAGCGGGCAC
CACTTTAAAATAAGACCAGACTGTAAGCTCAGTGGTCATTTCTCTAACCC
TTATTGTTCTTTATAGATAGATATCGAAGTTATTCTTTGCTGGGATTGTT
TAACTACCTCCAGGTCTATATATAGCTCGGTGGTCATctctcaaaagaaa
aagatcatAGAAAGTTTTGTGGAACATCAAGTGTTTTATAAATTGAGCAC
TAAcccttatttttctttatagatGTACCATGGAATCTGGAACTAGCTGG
TTTAGTAATCCAAGTGACGCTGAGTCTGTCTTCAAAACCGAAGCTTTCAG
ATACTTGTCTGCCTCTGGAAACAAAATCTATGCTCAATGCCTTGTCCGTG
TTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTGCTTTCCTGGT
CTCAAACGTAAGAGACGTAGTaccgaagaagaagaagaacccAGTGTTGG
ACAAATGGCTTTAATAAAATCACCAGTCTTCTACATCattgaaaaaggta
GGTAGATTAAGAAGTGATGATCGAGTGATCGAAGATGTCAGTATTACGGT
CTGGAAAACAGAAAATCAAGGTGGCcttttttcgagtgtaaaactCCAGG
GTATtcagtaaaatgaggttaaAAATCCAGGatggtcagtaaaacgaggt
caAAAAATCTTCTAGGAGAAATCTTTGGGTTTCTTATTCAATGTATGTTT
GTGTTGATTAATGCCTATTTGCTGATACCGAGGGACTTCAACAATAGGCA
ACCAAATGGAACATAAAGATATTCCTTTTCacaatattttgttcttttat
aGATACTCCAGCCCAAGGAAGCCAAGAATCTTCAAGTGTCCTCAGTGGAA
CAAATGGATTGATTGTCATCATTCTTTTGGCAACTTTGGTGTTTGCTATT
GCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCCAGCTGCTGTTGC
TTCACCAGTTGTTGCCTACAGTAACAAAGCTATGGCTTGAATATTAAAAT
TTATGAGAAAACTTCTTCTAGGGTTTACTAACATTTGTCAAGATTTATTA
ATGtccttatattttttataagaaaatcgtTTATCACCATCTTTATAcgg
tttcatttaaaaaaaattattgtaataagattaatttttttgtatttcat
tttttcttcaagaattttttttctattgtatATGGTCTGTAATTATGTTG
GATTTTTGTGCCCTGTAgcttttgattttataaaatgTTTCTATTAAGAA
AAGAATAATTTAGTTCGTTTTTTTTGTAGGAAAAAGCTTTGCTTATTTCA
CTTTCTCTCATAAGGtcactttctttttttgtgATTGTGATTGGATCCct
tttcccagctggcacacaacgttgttacaatgttcatctaacgttatatg
gacgttatgaacgttaaataaacgttgaaacaacgttgtgtggcaGTTGG
GTTCTATCAAAGAATGGACATCAAAAACACGCTTTTTTACTTGAACTAAT
Acattttggctgaactttggctattattgttattttcatttattatttta
tttttttttttacttaggtaaatggagggtacggtacgTAATGGGTACGC
AACTAGGGCTGCGAGCTGAAGGGGGGTGCTGCCCCACTTTTGTagtttgg
acccttaccgggactaaaaaggagaaaataaaggagaattttgggaattt
tacgacccttagcgggacaaatttgaccattattaactggttgaagtaaa
agccggtcaaaacaagaaaatgtgCTACTTTGATTGGTTCTCTAGCGGTC
AATATAATACGGTAAAGACCACTTCAGTGCTTTGGTCaaactgacgatga
ttttgaaaagggaaatttgttttatagaaaagtttcgtcggtttgaacat
gatttaaaaaactGACGTTGTCAGAATAAACCAAAGAAAATATTGGgtaa
aaaagaaacgaaaaaatcatggaaaatgagtggaaaatgcatttttttgg
TCAGAAACACGCAAAGAATGTTCACCAGTTAACAAACACAATAATATAAC
TGTTTTCTCGGTCAATacgtaaaatattgaccttaTCCTGCGCAcagacc
tcgcaagctcggtatGTACTTCGGCTGCGGTCAATATTTTACCGTATTGA
CCTCCAAACCagttattattgtattattgtTAACcagttactttttcgaa
gcgggctacacgactttttgcgcaatgcaattgtttctttttgcatgacg
acgggcctacattgtccagagttgcccgtcgttaggaaaattcattgtga
cgtcactttttcaaaggaaaatgaaNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNCATTAAACGagagttgaaaaaatg
ttgtgtgCCATTTAGATCAATGGccctttctatttctattttttagtaAC
TACgaaaactacaattttttttccgCACTTTCATAAACAACGTAATAATT
TATCAgatattatttttcattctttttctagACGATACCGAGGATTACAG
TTTCACTTTCACCCACACCAATATGGCTAATACCCCTACAACAGTCTACA
AACTTGGAGACTacatcaaattcaaaatggacTCAAACACCGCGCAAACT
GAAGTAAAAGCTGTGATCCAAAGATGTTGGANCAGTCTACAAACTTGGAG
ACTacatcaaattcaaaatggacTCAAACACCGCGCAAACTGAAGTAAAA
GCTGTGATCCAAAGATGTTGGACTACCACTGACGGATCAGCCAACTCGTA
CACTTTGATCACCAACAGGTATAATccattttcatttggataaAAGTAGT
CCGAAACTTAAAGTATTATTTTtccataagtgttcccgtttcatatcaga
cacatatctcatatcaggacagtgtctgcctattgttaatTTATGCTGAT
GTAAGCAAAAactttctgatcaatcttgtGAAATAAacttgatgagtaag
caaacgatatccatcttatctaaaaacaaaacatttaattttcaccatca
aaaattgaataaaattaagttgtttttcaaaatttattagcCAGATATTC
TGATATTGAAATGCAAATCACTTAAGAGAGACCAGACGGTAGACTAGGAA
CATCAATAAAGATATATTCATAgactggatatccaggctatcgtttttat
tgaaatataaaattATCGAATCTGTACGTATACAGTTCTGCACaactgtt
ttttttgtaaacaagCGTCTGTAAAAGTGTTGAAAAACTTTGTTGaacgg
aggtttgaaaaaaaaaactctaatCAAAATAATTCTTTGCTGAGATTGAT
CAACTGCCTCCAGGTCTATATAAAGCTCGGTGGTCATctctcaaaagaaa
aagattataGAAAGTTTTGTGGAACATCAAGTGTTTTATAAATTGAGCAC
TAAcccttatttttctttatagatGTGACATGGAAACTGGAACTAGCTGG
GTTAGTAATCCAAGTGACGCTGAGTCTGTCTTCAAAACCGAAGCTTTCAG
ATACTTGGCTGCCTCTGAANN

Coding sequence (CDS) from alignment at sc0000453:265243..276563+

>TCONS_00023407 ID=TCONS_00023407|Name=TCONS_00023407|organism=Clytia hemisphaerica|type=CDS|length=3012bp|location=Sequence derived from alignment at sc0000453:265243..276563+ (Clytia hemisphaerica)
ATGGCATCTTATAAATCTTTATTAGCGCTCTGCGCTCTGATTGGCTGCAC
TATGGCTATGACTCAACCTATGTTTGGTGATGGCTCAGTCGGTGCCGCAT
TTGAAACACTGTGTGACGACACACACTTTGCAGTCTGGTTTAACAAAACC
GCTTTGGATGAAAGACAAGATGGTACCAACAACAACCGAACATGGCAAAT
CTATTTCGAAGGTCAACGAGATGATGCCACCTGTACAACATACCATTGGG
ATACCAGCAAAAACGATGCCAACTATAATAGCCTTTCAAACCCTGCAGCT
ACCCTTCCATCTAGTGTCCAAATCGGTGCACCAGTCAAAAACTGTGGAAT
CAACGTTTTTGCTGATGCAACACACATTATCTACAACACAACACTTATTG
TTACATACGGTCAAAATCCAAATGCTGATATCGGACGTGAAGAGTATGAC
AAATACAATGTCATGTGCTTGAGAAATCGAACCGTTAACGAAATGGTCAA
CTTTAATGTTACCTTCCGTCAAACTGGAAATGACGCCAAGAACGATACCG
AGGATTACAGTTTCACTTTCACCCACACCAATATGGCTAATACCCCTACA
ACAGTCTACAAACTTGGAGACTacatcaaattcaaaatggacTCAAACAC
CGCGCAAACTGAAGTAAAAGCTGTGATCCAAAGATGTTGGANCAGTCTAC
AAACTTGGAGACTacatcaaattcaaaatggacTCAAACACCGCGCAAAC
TGAATGGCATCTTATAAATCTTTATTAGCGCTCTGCGCTCTGATTGGCTG
CACTATGGCTATGACTCAACCTATGTTTGGTGATGGCTCAGTCGGTGCCG
CATTTGAAACACTGTGTGACGACACACACTTTGCAGTCTGGTTTAACAAA
ACCGCTTTGGATGAAAGACAAGATGGTACCAACAACAACCGAACATGGCA
AATCTATTTCGAAGGTCAACGAGATGATGCCACCTGTACAACATACCATT
GGGATACCAGCAAAAACGATGCCAACTATAATAGCCTTTCAAACCCTGCA
GCTACCCTTCCATCTAGTGTCCAAATCGGTGCACCAGTCAAAAACTGTGG
AATCAACGTTTTTGCTGATGCAACACACATTATCTACAACACAACACTTA
TTGTTACATACGGTCAAAATCCAAATGCTGATATCGGACGTGAAGAGTAT
GACAAATACAATGTCATGTGCTTGAGAAATCGAACCGTTAACGAAATGGT
CAACTTTAATGTTACCTTCCGTCAAACTGGAAATGACGCCAAGAACGATA
CCGAGGATTACAGTTTCACTTTCACCCACACCAATATGGCTAATACCCCT
ACAACAGTCTACAAACTTGGAGACTacatcaaattcaaaatggacTCAAA
CACCGCGCAAACTGAAGTAAAAGCTGTGATCCAAAGATGTTGGANCAGTC
TACAAACTTGGAGACTacatcaaattcaaaatggacTCAAACACCGCGCA
AACTGAATGGCATCTTATAAATCTTTATTAGCGCTCTGCGCTCTGATTGG
CTGCACTATGGCTATGACTCAACCTATGTTTGGTGATGGCTCAGTCGGTG
CCGCATTTGAAACACTGTGTGACGACACACACTTTGCAGTCTGGTTTAAC
AAAACCGCTTTGGATGAAAGACAAGATGGTACCAACAACAACCGAACATG
GCAAATCTATTTCGAAGGTCAACGAGATGATGCCACCTGTACAACATACC
ATTGGGATACCAGCAAAAACGATGCCAACTATAATAGCCTTTCAAACCCT
GCAGCTACCCTTCCATCTAGTGTCCAAATCGGTGCACCAGTCAAAAACTG
TGGAATCAACGTTTTTGCTGATGCAACACACATTATCTACAACACAACAC
TTATTGTTACATACGGTCAAAATCCAAATGCTGATATCGGACGTGAAGAG
TATGACAAATACAATGTCATGTGCTTGAGAAATCGAACCGTTAACGAAAT
GGTCAACTTTAATGTTACCTTCCGTCAAACTGGAAATGACGCCAAGAACG
ATACCGAGGATTACAGTTTCACTTTCACCCACACCAATATGGCTAATACC
CCTACAACAGTCTACAAACTTGGAGACTacatcaaattcaaaatggacTC
AAACACCGCGCAAACTGAAGTAAAAGCTGTGATCCAAAGATGTTGGANCA
GTCTACAAACTTGGAGACTacatcaaattcaaaatggacTCAAACACCGC
GCAAACTGAATGGCATCTTATAAATCTTTATTAGCGCTCTGCGCTCTGAT
TGGCTGCACTATGGCTATGACTCAACCTATGTTTGGTGATGGCTCAGTCG
GTGCCGCATTTGAAACACTGTGTGACGACACACACTTTGCAGTCTGGTTT
AACAAAACCGCTTTGGATGAAAGACAAGATGGTACCAACAACAACCGAAC
ATGGCAAATCTATTTCGAAGGTCAACGAGATGATGCCACCTGTACAACAT
ACCATTGGGATACCAGCAAAAACGATGCCAACTATAATAGCCTTTCAAAC
CCTGCAGCTACCCTTCCATCTAGTGTCCAAATCGGTGCACCAGTCAAAAA
CTGTGGAATCAACGTTTTTGCTGATGCAACACACATTATCTACAACACAA
CACTTATTGTTACATACGGTCAAAATCCAAATGCTGATATCGGACGTGAA
GAGTATGACAAATACAATGTCATGTGCTTGAGAAATCGAACCGTTAACGA
AATGGTCAACTTTAATGTTACCTTCCGTCAAACTGGAAATGACGCCAAGA
ACGATACCGAGGATTACAGTTTCACTTTCACCCACACCAATATGGCTAAT
ACCCCTACAACAGTCTACAAACTTGGAGACTacatcaaattcaaaatgga
cTCAAACACCGCGCAAACTGAAGTAAAAGCTGTGATCCAAAGATGTTGGA
NCAGTCTACAAACTTGGAGACTacatcaaattcaaaatggacTCAAACAC
CGCGCAAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013168XLOC_013168Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023407-exon-sc0000453-1491911889:265243..265510TCONS_00023407-exon-sc0000453-1491911889:265243..265510Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1510915933:265243..265510TCONS_00023407-exon-sc0000453-1510915933:265243..265510Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1575043694:265243..265510TCONS_00023407-exon-sc0000453-1575043694:265243..265510Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1491911889:266268..266374TCONS_00023407-exon-sc0000453-1491911889:266268..266374Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1510915933:266268..266374TCONS_00023407-exon-sc0000453-1510915933:266268..266374Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1575043694:266268..266374TCONS_00023407-exon-sc0000453-1575043694:266268..266374Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1491911889:267223..267500TCONS_00023407-exon-sc0000453-1491911889:267223..267500Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1510915933:267223..267500TCONS_00023407-exon-sc0000453-1510915933:267223..267500Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1575043694:267223..267500TCONS_00023407-exon-sc0000453-1575043694:267223..267500Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1491911889:268685..268850TCONS_00023407-exon-sc0000453-1491911889:268685..268850Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1510915933:268685..268850TCONS_00023407-exon-sc0000453-1510915933:268685..268850Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1575043694:268685..268850TCONS_00023407-exon-sc0000453-1575043694:268685..268850Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1491911889:275524..275810TCONS_00023407-exon-sc0000453-1491911889:275524..275810Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1510915933:275524..275810TCONS_00023407-exon-sc0000453-1510915933:275524..275810Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1575043694:275524..275810TCONS_00023407-exon-sc0000453-1575043694:275524..275810Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1491911889:276465..276563TCONS_00023407-exon-sc0000453-1491911889:276465..276563Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1510915933:276465..276563TCONS_00023407-exon-sc0000453-1510915933:276465..276563Clytia hemisphaericaexon
TCONS_00023407-exon-sc0000453-1575043694:276465..276563TCONS_00023407-exon-sc0000453-1575043694:276465..276563Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023407-proteinTCONS_00023407-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000453supercontigsc0000453:265243..276563 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.584345	1.12285	0.445434	1.26287	4.12438	2.74147	6.12289	6.51267	8.80062	9.27214	9.04656	5.77047	0.538108	0.365781	0.0452201	0.482703	1644.12	1920.72	0.200072	0.209361	4731.61	4345.77	1190.24	1826.75	4180.41	3580.08	243.798	197.159	1.72296	1.33241
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001507ZP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023407 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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