TCONS_00023405 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00023405
Unique Name	TCONS_00023405
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	710

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000453:254773..272400+

transcript sequence

>TCONS_00023405 ID=TCONS_00023405|Name=TCONS_00023405|organism=Clytia hemisphaerica|type=transcript|length=710bp
GGATCAGCCAACTCGTACGATTTAATAAATGGGTGTCAAACGGAACCTGG
AACTAGCTGGATATCAGCAACTGAAGCAATATCCACCTTTAAGACCGAAG
CTTTCAGATACTTATCTGCCTCTGAAAACAAAATCTTTGCTCAATGCCTT
GTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTGCCC
TCCTACTCTCAAACGTAAGAGACGTAGTaccgaagaagaagaaaaaacca
gTGTTAGACAAATGGCTTTGGTCAAATCTCCAGTTTTCTACATCATTGAT
AAAGATACTCCAGCCCAAGGAAGCCAAGAATCTTCAAGTGTCCTCAGTGG
AACAAATGGATTGATTGTCATCATTCTTTTGGCAACTTTGGTGTTTGCTA
TTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCCAGCTGCTGTT
GCTTCACCAGTTGTTGCCTACAGTAACAAAGCTATGGCTTGAATATTAAA
ATTTATGAGAAAACTTCTTCTAGGGTTTACTAACATTTGTCAAGATTTAT
TAATGtccttatattttttataagaaaatcgtTTATCACCATCTTTATAc
ggtttcatttaaaaaaaattattgtaataagattaatttttttgtatttc
attttttcttcaagaattttttttctattgtatATGGTCTGTAATTATGT
TGGATTTTTG

Run BLAST on NCBI

transcript from alignment at sc0000453:254773..272400+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00023405 ID=TCONS_00023405|Name=TCONS_00023405|organism=Clytia hemisphaerica|type=transcript|length=17628bp|location=Sequence derived from alignment at sc0000453:254773..272400+ (Clytia hemisphaerica)
GGATCAGCCAACTCGTACGATTTAATAAATGGGTGAGATTGATTCAAGCA
TTCGAGCACGTTCATCtccataatttttttataattatttttaagtAAAA
CTCCTCTTATCGAAAAACCAAATCTTGCCAGCCAGGTTATTTTAGTTTTC
AATAGTTATTGTCAGGTTTCATGTTCCAATGGATAAGGTCTTTGAGTTGt
accaaattgaaatattttaaattaaaaaatattcaaagaacTCCCTTCCT
CATATCCCCGGAACTAAAGcagataaaaatttgattttctcttTAGGTGT
CAAACGGAACCTGGAACTAGCTGGATATCAGCAACTGAAGCAATATCCAC
CTTTAAGACCGAAGCTTTCAGATACTTATCTGCCTCTGAAAACAAAATCT
TTGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAA
TGTACACTTTGCCCTCCTACTCTCAAACGTAAGAGACGTAGTaccgaaga
agaagaaaaaaccagTGTTAGACAAATGGCTTTGGTCAAATCTCCAGTTT
TCTACATCATTGATAAAGGTAGGTAGATTAAGAAGTGATGATCGAGTGAT
CTAAGATGTCAGTATTACGATCTGGAAAACGGAAAATCAAGGCGGCTTTT
TTCGaatgtaaaaatccagggtgtggtcagtaaaacgaggtcgaaaaatc
cTCTAGGAGGAAGCTTTGGGTTTCATTATTTACTGTATGTTTGTGTCGAT
TAATGCCTATTTGCTGATACAGAGGGACTTCAACAAGAGGTAACCAAACG
GAACATAAAGATATTCCTTTTCacaatattttgttcttttataGATACTC
CAGCCCAAGGAAACCAAGAATCTTCAAGTGTCCTCAGTGGAACAAATGGA
TTGATTGTCATCATTCTTTTGGCAACTTTGGTGTTTGCTATTGCTGCTGC
CATTGTCAAGAAAGTTTTCTTCAGTGCTCNCTTAGCAACTTTGGTGTTTG
TCATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTTCACCAGCTGCT
GTTGCTTTCCAAGGGCATGTTGTTTCGTATGATAACAAAGCTCTCACATA
GATGAAACCTTGTCTCTACTATCAACATTAAAAAAGCAGGttcattcatg
atattcatgacgttgTTTTTTCTACGGTAATCCCATACCCCAGTTTTTAG
CCATTgatggcaaatttaaactagacaaaaaatttaaaaacaataccact
actggcaaaaactggggtctttccgtagaaaacattacgtcatgaatatc
atgcaTTTGGTTGTAATACTATCGTAAACTTTAAGATGTAGCTTAGTAGT
TctatattttttacaatatttcaaaCACCTACTTTCCTGTTACAAATTTT
CTCTTCTTTCGACTTAAGATGCGCTGTGGCACGTAAAGTGCAGCAAATTC
GATCCTTTTTTTGCTTTACTTTGTCTATAATTTATGGCCTAAAGCTTTTT
CTAAATGATTATAAAGTAAATATAGGATACATTGGATTTTTTACTTGCTT
AAGCGGTTTGAAACTTTAAGAATTATGGAATACCAGATTGGGTATGGTAG
Tttttaattttacattttttattatttgtactatctaataaataattttt
ttgtaaacaaattaatatttttgtgACTCTGTAAATAATAAAATACACTA
ATACGTTTGTACTAAAACAtgcaggcacgacggaagctttttatatctgg
tacggcgaatgaggaaatttaagcgattttatagcgagtttaccgacgaa
gaggaaaacttcgggtatttttgtgaaaatctggtcCGGCGCCCGCCGTA
CCTGCtgtacccgttgcgtcgtgcctgaACATGACAAAGACATACATATT
AATAATTCgattcaaaatatcaaaatattttattttcttgagTTACACTA
TAAAAGGGGTCTGGATcgtaggaaaatgggcaaaaatacccacaaaacaa
aataagaacaatataAGAAGTCATAGAATGAATCAGTTGACAATATTAAT
TTTTTAGGATATATCTTTATTCTCTTCTATTCTTAAGAtggaaagaaatt
attttttacgtGGTTAGTGCAGTAATTAAAGAATTTTAGAGAATCTTTCA
GCGGTTGTGACTATATTTTTACAGCGTTCTTAGCATGCAATATATTATAA
CTCAAACAAAAACTGGGTATTTTTGAGAAAGCTTCTAGCCTTGCTGGGGA
ATAATTTTAATAAGCAATTCACAGGTAAAAGGCTCTAAAAATTGTATTCT
TTACTTCAGTTTCCAAATTCTGTGATGTCatgatattcttaacatgttct
tatttatgGCAAATTTCACCATCATGAAAGAGAAAAGCGTGTAATTAACC
ATTCTTGTTTGTTCGATTAAAATCCAATAGCACACCGCGCttaatctaaa
aatagattttatttttgacaaaatccaAAGCcattaaaagattttgcttt
tacGTAAGGGTTCccgttcccgtttcatattagacacatatttcatgtcg
ggatagtgtctgcctattgttgtATTGTGCTGGtataaacaacaaaaata
tttctttttctctttctggccaatcttgctccacatccgtgtcaattcag
tACCAAAAAGCTTGTgagttaaaattgatgagtaagcaaacgatataact
cttatttaaaaacaaaacctcgAAGTAAAAATTGATTTCtcaaaacagaa
aattaaaaataagcgattttaatataattttcaagtcCTTGTACATGTTT
TTGCTTTAGTCATGTggttattttaaaaacttcttttGTTCTTAATTCTC
TGTTAGTCCTGGAGTTAAGCGTATTACGGCCCCTATTAAAGCCGGATATA
CTTTTTACATTTTAGTTTTCAATaagaaattatttgaaattttgatggga
CTCATTAGTACAGAATCGTGTGTCTATAATTAGTTCCGTTatcgaaaaaa
tcatttttctttttcagttttgatGGTGCTTTTTTGtgaagtatttaatt
ttttcccaaaacgTCGGGCCGTTATTGTAGGTACGGTTACTTAATTCCGT
CTCAAAAGCAAGACCTAAAACAGacgaaaaatggccaaaaacagTAATTG
TCGGGGAATGTAATTGTCATGCTTGTATAAAAGTTagttataagaacata
aggcttcagtGGCCAAAATCTatagtacagggtgtccctaattaaagtta
TCGAGTTTggacatgcgattgagtagaaaagtttgtgtgtgttatcgcta
aaatataagaacgttctccatcacacaggcttattacaaaaggtagttac
aacgtataaattaatcataatgacaaagaaaaaagagggagagcttaaaa
tacaattttgtgcacacgcacataaaactttctactcaatcgcatgttca
aactcgatactttaattagggacaccctgtatagaacatttcaaggcttt
ctGGTCTCCTTTTTATTTCCTGTTTTCTCAGgaaataaaaattctatcgT
TCTTAAGTCGAGAAATCCGGTGGGatgattttggagtgcaattctttaca
ttgaattttgaatgggggaTAAAATCGAAGTCACTGggatgaaattgtag
ggtattcttCGCACTGGGGACGGTGCCGGGAACGAGATTTTGGCCGAATT
TTCCAGTATGTCAGTGACACAAGGGGTGTTTCAAACTTTATTGTAGATCT
AATCTCTAATCCTAAAGTGTTTCTTAGAAGTTTCTATTGTTAAAATATTC
TAACAAGATTTGATTTTGTTCTGTCAAGGTCTTGTGAgtgcacccccttc
tcacagacctggtagaaATTTTCAGCCAGTAGGGGGTGGTACTTGTTATT
CTCATGGAAAAAATAGTACAATATTTTGTAGTGAGAATTTGctcatctga
ttattttcagtcgcgaaaaatattcgaatataattttccactggggacaa
aattttgaccaattctTCCATTGGAAAGGGGAGTCCtattgggtctgtga
gaaaagaGTGTGTGTTAGTACAAGTAGTACCATGTATTTCCTCAATTCTT
AAAAGGCgttcatgaaaattttgattaacCTGATAGTCTGTTAGACTTTC
CTTtaatacacccctttctcacagacccggtgggattttttcagccagta
gggataaaaataacggactggaactcgatagggattgatatttccatatt
tttttatggctggggattccaattattttgtttttaagtcagaaaattca
gtggggatgagaaaaataacatattttgcagtgaggattggtttattcga
atattttcagcggggacaaaaaatGGAGGATAATTCTCcaccgggacgat
atttttgccattatttccagtgggtctgtgagacatACATTGCCAATACT
AAAAGTATCTATTAAAGTCCCTTGATTCAATAAAGAGCAATTTTTATTTA
CTTGCAGAATTTCGACTGATAGATGATCAACTAAAAACTTGTAATTTTAC
GTTCACTAAATTGAATATATCCTGGAAATACAAGcaaaatcattaagaaa
atgccttcattctttttttataagaacaggaAGACTTAAAACAGccaaaa
atgagaacaatttaaTCCCAAAGCTgaaccagagatttgggaaaagagga
taagaaatgcgctattcatctatttgaagctaggctgtattttttttttt
tatttattccaGTTGAATCACTCCACCTTACCGGCGGgcaaaatatacaa
aattttgcaaattcttGTCCTAATTATATTATTTCTGGTTATAATTATAT
TATAATACCACTGATATAGTAATACGAAAGTCAGTAGAAGAAATTCAACA
GTCGATAGTAGGAAAAAAGACTAACTTCTACCACCCTCTTGGAAAGGGCG
GCAGAGGCGTAGAAGGATGAAAATTGGAAGTCCGTTGGTTTCTTCTcccg
ctttttttttttttttttttttNTTAAGTTGTGACTTGTCAGTTCTTTCA
GATTTTTACATTCAATCACATGCTCTGTAGTATGTTTGTTTTCATTGCAG
AACGGACAATTTTGATTAGCCAGGTTGTTGTTTCGGTAATTGTCTTTTAA
GTCCGTCATATTTAGTCTTATATTTAAAACATCAGTCACCTCGTTCTTTG
TTAATTCATGAGTATATTTTTCCCGTTTGAGGTTGGTTAGCAGCCTTGAT
TTTGATCCTTTATTTTCGTTGAATTCGACGAGCCGTTTCTCATCGACTGC
TTTTTCGACTCTCTTTTTCCATGccatttttgtttcattcgtCACTTCAC
TTAAGTCATCATTTAACTTATACTTAACGCTCAAAGCCTCTAATTGGCTG
TACCAATTGTTTTCATATTGTCTTTTTATTTGCTCTTCAAGAATTTGTTT
TGCAATTCTTTCATTATTTGAATTCTTGAATTTGTGGAATAGCATGAATT
TCCTTATATTTATTTCATGCTCTATTTTTCGTAACCCAACTTCACTTAGG
AACCCTTCATAAGGggttgaaattttcatgttgaAGAGATAATACAGCAC
CTCTTTTTGTAGCTTTTCGATCTTGGTCATGTCTGTTTTCGTGACCATGG
ACCACGTTTCGGTATTATTTAAAATGATATTTTCGATAATTGCCTTATAT
AGCTTCAGGGCTACGTCACAATACTTTACACCCGTTCGCATAGCTTTCTT
TTTGATTAACACTTTCAGATAATTAATCTTATTCTCCTTCTTTGCTATTG
AGTCGGAAACGCTCCCACGTTGATTCATTACCTCTCCTAAATACGTAAAT
actgtagaatcttttgtttctattgaaatgtctgcGGCCGATCGATTGTT
TTTATTCTGGACCAATCAGAACACTTGATTCgttatgcgcacaagactag
aagtacaaacaaaaaatggcagccgtgattgatatcgaaagtgaaataat
tttttttttaatcgctgattttgatattttttataagcacttttcacTTT
GAACGCAGTGTTTCTCAAGCCTTCGACGTTGTGCTTGAAGGCGAGAATTA
CCCAgctttgaccaaaatattttttccttatacAATGATCGAATCAATTT
ATACATTTATACATACTGTagcaaaaagaattgaaattcacattataaaa
ccaaaaatgaTAAGCTTGTAAAACTAGGATaatttttggttatttcttGG
ACTAGAGTTTCTAGCCGGGTAGTGATGTTGGGTATTAGAACAAATTGGAA
ACAGGACAAAAATAGAgctcaaaagaaagaaagaaaaaaaaaagaagcga
tgataattcatgatatcaatgctaGAAGATCACAAATATCATGAAATCTT
TCTTTTAAGAGCTTTATATGAACTCGAAacaataaagcataaaaaatcca
aaacattattgaaaaaaatacaatagttaTACAAAACAGCTCCATCTAGG
GATTTCCCTTGATATAATGAAATATCTATATAGCAAATAAAACAGTATAA
TAAAAGTGCATAAGAattaaaaatatccttctcaTAGTAGAAAACATTTA
TGCAACTCTTTTAATTTGTAAATGCTGCTAaaaatggtttgaaatttttc
taaaaaagattaaacccaaaagggtttttttatgattcacCTTCATTTAT
AACACCTGGGAAAATAAAGACgtattgcatgaaaaaaatcaatatcattC
ATGacttaacttgaaataaaattgagaagACTATAAAAAAAGACTAAAAC
CTTCCAACTGATTTTTAATTAGTACATTGATTCAGATTGTATAACTTGAA
AGCTAGTCAAGAAAATTATATCATTGCTCCATAGAGGACTAAATTCAACA
GATGTCTAACTCattgctaaaaaattaaatatttacatttggaaaaaata
ttggaaaaataataTCAGCCTGTGCTCAGAAAAACTTGTTACATAACAAC
AAGTGAAAATATGTGTTCAAATAGAATTGTAGAATTTAAATAGAAGAAAT
TTTGGGGTCTcctagtttgtttacatttggtaatTTTGGCCCACATGTTT
CCTGGCTCTGATGACTTGTTTGGACCATCTTTCCAGGGACAACCAGCCTG
GATACAAAACTAACATCCAAATAAATACAGTTCGATAAAAATTCTCCAGA
CTGATCAAATTTACATAATATGGAAATCCACTTTTTCCAGAAACATTTTC
CAAGTATATGTCCAATTTCAAAGGATATGTAGGCGGTGCTCAACCAGGTT
CAACTGTTCATATCCACGGTTGTCcagaaaacatttacaaaacatttaca
aaatattaacatcctctgcatatatttattattccattctgttttgGTTA
AGCTAAATAATGCACGTAATATAGTTTCTGCaggtttaatttcatttttt
agcagACTTTGCCATGTCTTAACGTGACggtcaaaatgcaaaaatgttga
GTCATCCTGAGTCAAATCTTTGCTTCATTGCACCAGTGCTTGGATGGCCC
ATACTTAACTTTCTGTGGAATGGTTTTTCTGGGTAGTGTTGTTATAAACA
GTATTTCATAGAGAAAATTACGATAACTAGccctgaaaatatataaaatg
aaaatctactgTAAAACTAgggcttttttgtttttgtataagCAATAATC
TGTATGAATTACCCTAACACAGACTGTAAAGTCCACCGATGAAATTATGT
TTTGGCTGCAAAATTGTCCAAGCCTTGTGAGTCAATCCACTGACTGGTCA
AAATCATGGCCCATCAATAGTCAGACTTTATTTGAACTTTacaatgtttt
tgttaaaaGCCGAAACtttaaatttccaacccaaaagtcAATGTTTTCCC
TAGATAAAGCTAAAAGTACCACAGAGGAAATCAAGTATACTTACTGAATC
TCAAGTCCATTACCATGGAGgaagtttttctaagattataactttttcat
ctaaaagttgaaaaaaacaacaaaattatcaatCGATTGTGCCCATCTTA
AATCAAAATGCCGAGAAGTTTTAGAGAGTGCCCAGGATAACTAAGGCATA
GGTGGTCACAATCAACCTTTctactacccataaaaattatgtctgcaaca
caaaaaattcattcagagtaatacaagccagaaagaaattggtcccgatt
tttcaaaatttcaagcatgcctcatgtccgccatctttactcccagaata
tagaatgattttcctcgattttctcAGGGGAAACCCCCAGAAGATCAAAG
ATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTCCAAATCTCTGGCTGAACCTAGGA
TTGttgaattttaaacaatttaaggtccaaagtagtaaaaatttagttaa
agacctaaaaaaaactcaattttcCCCTAAAAAAcattattatccgacgc
gcgtaaatagcgacatttgattggcctctttgctgtccaatattttcgaa
tatatagcttccatggaggctacatatttcaaaaattgacgtcacacaac
gagttcaatgacaattgagcatcttcctttttgacgttacgtcacaaaaa
aaaataagacttttgaataaaaaactaccaagaaaccagatttacgagct
tataaattggaattatgtttgaaaacgagaaatgTTTTAGCGATAAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNatgaaaaatattgggctacgaga
aaagatattggactcggcaaagcctcgtccaatatcttttctcgcacgcc
caatatttttgcatattggattcgaccttgtccaataactgcttaatatT
AAGATAAAATCAAGTCACAATAAAGAATTATTggctcttattaaaaaaat
tgtgatgTTGAGTTGGTACAAATAAATATTCAGTGAGTcataacattttc
taaaaatccacACACCAGTGGTCAATATCACAGTACATGAAGTGAATTTG
AGTGAGTAATATCGCTGTTCTGAATTCAGTAGCCGGCAATAGTTTATGAG
GGCGAATTtgtatcaaaaaaagttaataaaaaagtacacatttttttttt
aataagaacatccaaagattttcaagcctttggatgttcttaactttttt
agttttaagccttaaaatgttcttaattttcgccattttttgagtttttt
tttttatttttNtacacattttttttttaataagaacatccaaaaatttt
caagcctttggatgttcttaacttttttagttttaagccttaaaatgttc
ttaattttcgccattttttgaatttttttgtttattttcctaagaaattg
ggtgagCCTGCGAAACCTTATAATTTTtgtaacttgttcttaatattttg
gccaccgaagccttatattcttatatagtttgttctcataaaaaaaaagt
attgaaaGAAAATTGGTAATGAGAACAGTTTTAACCAGTGGGGAACCTCC
TTTTAAACAACTAATAGTCCTACTAAATCCAACTGTGAGAGCTGACACAA
AAGAGTGACAGTGCATCTTGGCTGTGCGCATtctaaagaattaaaaaaga
aatcaaatacaatttcaattaaaagaaaatgattaaaaaaaattgactaa
ggTAGCAAATTGTATTAACTTATGAGTAAACCATGAGTCATTTTAGTACC
CAGGTACTTTCTTTTTGTTCGGTAAACAAAAGATCTGTATTTTGATTGGA
TGATGCAGGTACCACGTGAGTATCTATTGTCCAATAGTACTTATACAACA
GCACACCCTTCAGAAGTCATTCAAGTTTGAAGCATTGGTATTGAAAGGGT
CTCTTCAAGAAACTTTAAAGCAATCGAAGAATAACCTTGTGAGTTtgata
tattatattttttttggttcttttaaagatttttaggGTAAGCTcgcaac
ccagctggcacacgacgttgtttcaacgttcatctaacgttatatggatg
ttgtgaacgttagaaaaacgttgaagcaacgttgtCTGCCAGCTGGGAAT
GTATGTATTGAAATACAGTAATTTTATACACCATCCTACAACCCTTTAAC
TCTATAATATGTTTAACGTTTGTTGAAATACCGTCAGATTCAGAACTGAC
GTGCATTGAAAAGGCCGACGATTTCGCTTGTCCATACATTGCTAGCTTGC
TaagatttttagttttgattttattattaNCGCTTGTCCATACATTGCTA
GCTTGCTAAgatttttagttttaattttatggtgaattcttttttgaaat
tgttgaccgtaatggattttttttgtttttttcaaagtgTCTTTTTCAAA
CACGTTTTTTGGTCTGAAGCTTTGGAGATTCTAATGTGTAATTGGGCCGA
GAAGATCACAGttaatatttagaattttttctttatcttcAAATTACATA
AACGTtattaaagtaaaataaaattgaaggaTCTTTGACCATAACATTGG
AAAAAAGGGCGTGGTAGAAAAAATGAAGCTCGATGCCACCCACGATTAGT
ATTTTTTTCGCGCCTAACTAATTCTTGAATGTATATTAGATGTACAGGAA
AATCACTGGACGAAAAGGTCTCATTTAATATTATCTTTCTTTTAGTTCAA
GTATCATGGCATCTTATAAATCTTTATTAGCGCTCTGCGCTCTGATTGGC
TGCACTATGGCTATGACTCAACCTATGTTTGGTGATGGCTCAGTCGGTGC
CGGTAAGTTTGATTACCCATAATCCAACTCAATGATGCAGACAAataatt
aagtttttttttTATTTTAAAGGGACATAAAAGTAGTAAAATGTAAACAT
TGCGCGAACCacgtgtcattaaagagaacaattaaaatcacgtgtccaaa
acaaacttgtaaaacgattgaacaatcaaaattagccatatttggtttga
ttctttattttgacatgtgatgtttgatttgattttgtatccgctgcata
cagtttgtttacaaatttcgcaagtactgttatgtccctttaaccaCGAA
GTTGAGGTTTTAGTGTTCTGTAGATATTTGGTTTGTGAGACATTGTGTTG
TCTGATACATATATCAAGGTCCTTCTTATGTCTGATACTGTTTAaaacat
ccctgtgtcacagacccactgggaacccagCCCCACTAGGAAAATTAGAa
gaaatttcgtccccggtgggaaaagaCTCTGAAATTTCTTCGCCACTGGG
ATATTGATCTTGAATTCTTCAAAaccttcaaaaccatccccactggattt
cttAATCAAGGAattaacaatagaatttctatctctATTAAGATTTCGAT
AGGAATTTTTACCCTActagaaaaagttccaccggggctatgTGAGACAG
AGGTGTTTTGAAAAGACGAGAGAAGCAGTTTTAATCTAGAGTTCGATGCC
TGTCTCTGCTTACACTTTTTTCATGCAGTTAAGCTTAGATCACGTGAAAT
GAAATTAGGCAACCCTATAGAGTGTCTCATCACTGGCTTGTAACCTAAGT
ATGTTGCAAGAAACAGAAATATAGAAGGTTTTCTCGATTATGTCTTGTAG
CATTTGAAACACTGTGTGACGACACACACTTTGCAGTCTGGTTTAACAAA
ACCGCTTTGGATGAAAGACAAGATGGTACCAACAACAACCGAACATGGCA
AATCTATTTCGAAGGTCAACGAGATGATGCCACCTGTACAACATACCATT
GGGATACCAGCAAAAACGATGCCAACTATAATAGCCTTTCAAACCCTGCA
GCTACCCTTCCATCTAGTGTCCAAATCGGTGCACCAGTCAAAAACTGTGG
AATCAACGTTTTTGCTGATGCAACACACATTATCTACAACNaacaatccc
acaatgcatcgcatttttagaaaaatcaaaaactccgataagatctattt
ccttaaatttaaagggttttttttaaacaaagttgatattgtttgcttag
TCATCAATTTTTCACATTATAGTAAAGATTTCTACCTTTTTATACCTTAT
CATCAAGTTTTgatataaaattgtttttgatcCCACCATGGTTTTTACGG
CTTGTTTGTGCAAAACATTTTAATCTAGATTTCTCTAGCTCTCTTCTGCT
TATAtgttttattactttttaacaATCTGGTTTTTAAAACTATTAAGTGC
GTTcagcacccccccccccctgcgggGTTCTAGGGCTGCTAGCTGATAGG
AGGGTCCCGCCCGACTTTCGATCCTTGGACTTTTACCCaaactaaaaaag
agaaaaaaaaggacaattttgtgaattttgcgACCTTATTAGGACAAATT
TTGACTAAATTCCGATCTTTCCGgtggtaaaaagttgaaattctcctatt
tttccgacctttAGTGGGACTAAAGTttgactttctgatttttccaaccc
ttagcgggactttgcaACTCTAAAAAATGTACCCTTACCGTTCCCtctat
ttgcctaagtacccccccccatCCCCGGGTCCACGCCCAAATTAGTTAGA
caatcctatcgtctacacaagatcactaaaaaagggaatagtttaggagg
tgggataaatttgaaaacggtgGTTAGCCttgggtggagtaagcagtggc
gaaGGAAAATAGTGTTCACGTAAAATAAACTAACATTAGACCTTTTGAAG
AAAGATGTTCGAAAAGGGTCAGAATGTATGAATAGTAAATTTTCATcaga
ttttgacttaaaataATTTCCTTCTTTCTTTCAGGTTTCGAAGTTAAGTG
TGACGACACACACTTTGCTGTCTGGTTTAACAAAACCGCTTTGGATGAAA
GACAAGATGGTACCAACAACAACCGAACATGGCAAATCTATTTCGAAGGT
CAACGAGATGATGCCACCTGTACAACATACCATTGGGATACCAGCAAAAA
CGATGCCAACTATAATAGCCTTTCAAACCCTGCAGCTACCCTTCCATCTA
GTGTCCAAATCGGTGCACCAGTCAAAAACTGTGGAATCAACGTTTTTGCT
GATGCAACACACATTATCTACAACACAACACTTATTGTTACATACGGTCA
AAATCCAAATGCTGATATCGGACGTGAAGAGTATGACAAATACAATGTCA
TGTGCTTGAGAAATCGAACCGTTAACGAAATGGTCAACTTTAATGTTACC
TTCCGTCAAACTGGAAATGACGCCAAGAGTAAGTTCAAATTCATTCTTTG
TCACGAAAGTCACTAAAAATCGAAGGAAAACAAACACTTCATGGTTCacg
gtttttataagaacaaactatataggaacataaggcttcgtttgtcaaaa
tacacgtttttttaatataaggaacacgtttataaggaactcgaggctga
aaatggtccaaaaaataagcaattgtttaggaactgctcaggctgagaat
aaaaaaacaagttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGAcc
cggggggcactcgattttgaaaacgaccgtaagTTCGGCCAAAactcagg
tctctaaaatcggacccttgcagtgcaggaaaaaattagctgaaaatcga
cccttattgtgcaatttttcaaaaaattttgacatttcTCAAATtctaca
cccttacagtgcactttttctcacttgctcacaaatcaacccttaaagtg
cactttccaagtccaaaaacctacccttaagggccgcacgtccggtaggt
cacttacctggagtgccccccccctccTCAGAGCTGATGTAAGCAAAAAG
TAGTTTTTtgctctttctgaccaatcttgctccacatccatgtcaatcca
atgtgaaaaagcttgtgaaataaaattgatgatcaagcaaacgatatcac
tcttatctaaaaacaaaacattcaattttcacaatcaaaaattgaataaa
attaagttgtttttcaaaatttattagcCAGATATTCTGATATTGAAATG
CAAATCACTTAAGAAAGACCAGACGGTAGACTAGGAACATCAATAAAGAT
ATATTCACAGACTGGATATTCAGGCTatcgtttttattgaaatatgaaat
tatcGAATCTGTACGTACAGTTTTGTACaactgttttttttgtaaacaag
TGTCTGTAAAAGTGTTGAAAAACTTTGTTGAAGAGAAGTCATTATTGATc
gtagtttttttgaaagtgataccTACAAAGAAGCCATTGTGTAGTGCTAA
AATTTTGCCTAAGTGAACTACATCACTTGTGTAGAAGCAAAAGTAGATCT
AGCAATCTTGAAGCGGGCACCACTTTAAAATAAGACCAGACTGTAAGCTC
AGTGGTCATTTCTCTAACCCTTATTGTTCTTTATAGATAGATATCGAAGT
TATTCTTTGCTGGGATTGTTTAACTACCTCCAGGTCTATATATAGCTCGG
TGGTCATctctcaaaagaaaaagatcatAGAAAGTTTTGTGGAACATCAA
GTGTTTTATAAATTGAGCACTAAcccttatttttctttatagatGTACCA
TGGAATCTGGAACTAGCTGGTTTAGTAATCCAAGTGACGCTGAGTCTGTC
TTCAAAACCGAAGCTTTCAGATACTTGTCTGCCTCTGGAAACAAAATCTA
TGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAAT
GTACACTTTGCTTTCCTGGTCTCAAACGTAAGAGACGTAGTaccgaagaa
gaagaagaacccAGTGTTGGACAAATGGCTTTAATAAAATCACCAGTCTT
CTACATCattgaaaaaggtaGGTAGATTAAGAAGTGATGATCGAGTGATC
GAAGATGTCAGTATTACGGTCTGGAAAACAGAAAATCAAGGTGGCctttt
ttcgagtgtaaaactCCAGGGTATtcagtaaaatgaggttaaAAATCCAG
GatggtcagtaaaacgaggtcaAAAAATCTTCTAGGAGAAATCTTTGGGT
TTCTTATTCAATGTATGTTTGTGTTGATTAATGCCTATTTGCTGATACCG
AGGGACTTCAACAATAGGCAACCAAATGGAACATAAAGATATTCCTTTTC
acaatattttgttcttttataGATACTCCAGCCCAAGGAAGCCAAGAATC
TTCAAGTGTCCTCAGTGGAACAAATGGATTGATTGTCATCATTCTTTTGG
CAACTTTGGTGTTTGCTATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTC
AGTGCTCCAGCTGCTGTTGCTTCACCAGTTGTTGCCTACAGTAACAAAGC
TATGGCTTGAATATTAAAATTTATGAGAAAACTTCTTCTAGGGTTTACTA
ACATTTGTCAAGATTTATTAATGtccttatattttttataagaaaatcgt
TTATCACCATCTTTATAcggtttcatttaaaaaaaattattgtaataaga
ttaatttttttgtatttcattttttcttcaagaattttttttctattgta
tATGGTCTGTAATTATGTTGGATTTTTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_013166	XLOC_013166	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00023405-exon-sc0000453-1491911889:254773..254804	TCONS_00023405-exon-sc0000453-1491911889:254773..254804	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1510915933:254773..254804	TCONS_00023405-exon-sc0000453-1510915933:254773..254804	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1575043694:254773..254804	TCONS_00023405-exon-sc0000453-1575043694:254773..254804	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1491911889:255069..255340	TCONS_00023405-exon-sc0000453-1491911889:255069..255340	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1510915933:255069..255340	TCONS_00023405-exon-sc0000453-1510915933:255069..255340	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1575043694:255069..255340	TCONS_00023405-exon-sc0000453-1575043694:255069..255340	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1491911889:271995..272400	TCONS_00023405-exon-sc0000453-1491911889:271995..272400	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1510915933:271995..272400	TCONS_00023405-exon-sc0000453-1510915933:271995..272400	Clytia hemisphaerica	exon
TCONS_00023405-exon-sc0000453-1575043694:271995..272400	TCONS_00023405-exon-sc0000453-1575043694:271995..272400	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000453	supercontig	sc0000453:254773..272400 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.235831	336.249	390.877	0	0	1071.91	974.239	192.71	340.358	808.669	1016.7	0	0	0	0

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00023405 vs. Swiss-Prot (Human)

BLAST of TCONS_00023405 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00023405 (transcript) - C. hemisphaerica