TCONS_00023401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023401
Unique NameTCONS_00023401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1385

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023401 ID=TCONS_00023401|Name=TCONS_00023401|organism=Clytia hemisphaerica|type=transcript|length=1385bp
TATAAAGTAGAGAAAAATGCATACTGAAATTGACACGACACACATAAGCA
ACAAACAGAGGCTTGTGGCAAGAAGACATCAAGAACAATTTAAACGCGTT
TCACGAAATTTTATCTGCacgatttgaaaatgtttcttttcGTCAGTCTT
CTGGCAGCTTTTGCTGTTGTTCATGTTCAATCGTATGCCTTATTGGAACC
TAAAATTGCCGAATTTGCCGTCAAGTGTGATGATGACTCAATTGCTGTTT
TTTTAAACAAGACCGCTTTGGATGAAAGACAAGATGGTATCAACAACAAC
CGAACATGGCAAATCTATTTCGAAGGTCAACGTGGTAATGGTGGTTGTAC
AACATACCATTGGGATACCAGTAAACAAGATGCCAACTTTGGAGCAGGGG
GAGCAATAACCAACCCATCTGCAGACCTTCCATCTAATGTCCATATCGGC
TCGGCAGTCACGAGTTGTGGAATCAATGTTTTTGCAGACGCCATCAACAT
TATCTACAACACCACTGTCATTGTCATGTACGGTGAAAATCCAACTGCTG
GAATTGGACGTGAAGAGTACAATAAGTATAATGTCATGTGTTTGAGAAAC
CGCACTGTCGAAaccgatttgaaaaattttaatgtcaCTTACATCAAAAC
TGGAAAAGCCTCTAAAAATAACACTGCGGATTTTGAATTCTCTCTCCTGC
ACTCGTCTATCGCCGGTCCCTCGAAACCAGTCTACAAACTTGGAGAATAT
ATCAAATTCACTCTGACAGCAGTGACATCACGAACGGAAATAAAAGGTGT
GATCCAAAGATGTTGGACTACCACTGACGGATCAGCCAACTCGTACGATT
TAATAAATGGGTGTCAAACGGAACCTGGAACTAGCTGGATATCAGCAACT
GAAGCAATATCCACCTTTAAGACCGAAGCTTTCAGATACTTATCTGCCTC
TGAAAACAAAATCTTTGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTC
AAACTAGCGCTGAATGTACACTTTGCCCTCCTACTCTCAAACGTAAGAGA
CGTAGTaccgaagaagaagaaaaaaccagTGTTAGACAAATGGCTTTGGT
CAAATCTCCAGTTTTCTACATCATTGATAAAGATACTCCAGCCCAAGGAA
ACCAAGAATCTTCAAGTGTCCTCAGTGGAACAAATGGATTGATTGTCATC
ATTCTTTTGGCAACTTTGGTGTTTGCTATTGCTGCTGCCATTGTCAAGAA
AGTTTTCTTCAGTGCTCNCTTAGCAACTTTGGTGTTTGTCATTGCTGCTG
CCATTGTCAAGAAAGTTTTCTTCAGTTCACCAGCTGCTGTTGCTTTCCAA
GGGCATGTTGTTTCGTATGATAACAAAGCTCTCAC
Run BLAST on NCBI

protein sequence of TCONS_00023401-protein

>TCONS_00023401-protein ID=TCONS_00023401-protein|Name=TCONS_00023401-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
MFLFVSLLAAFAVVHVQSYALLEPKIAEFAVKCDDDSIAVFLNKTALDER
QDGINNNRTWQIYFEGQRGNGGCTTYHWDTSKQDANFGAGGAITNPSADL
PSNVHIGSAVTSCGINVFADAINIIYNTTVIVMYGENPTAGIGREEYNKY
NVMCLRNRTVETDLKNFNVTYIKTGKASKNNTADFEFSLLHSSIAGPSKP
VYKLGEYIKFTLTAVTSRTEIKGVIQRCWTTTDGSANSYDLINGCQTEPG
TSWISATEAISTFKTEAFRYLSASENKIFAQCLVRVCLDTQTSAECTLCP
PTLKRKRRSTEEEEKTSVRQMALVKSPVFYIIDKDTPAQGNQESSSVLSG
TNGLIVIILLATLVFAIAAAIVKKVFFSAXLATLVFVIAAAIVKKVFFSS
PAAVAFQGHVVSYDNKAL
Run BLAST on NCBI

transcript from alignment at sc0000453:244885..255869+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023401 ID=TCONS_00023401|Name=TCONS_00023401|organism=Clytia hemisphaerica|type=transcript|length=10985bp|location=Sequence derived from alignment at sc0000453:244885..255869+ (Clytia hemisphaerica)
TATAAAGTAGAGAAAAATGCATACTGAAATTGACACGACACACATAAGCA
ACAAACAGAGGCTTGTGGCAAGAAGACATCAAGAACAATTTAAACGCGTT
TCACGAAATTTTATCTGCacgatttgaaaatgtttcttttcGTCAGTCTT
CTGGCAGCTTTTGCTGTTGTTCATGTTCAATCGTATGCCTTATTGGAACC
TAAAGTTGCCGGTGAGTTAACTATGTATTGAAAATCgagatttttttgaa
aggttgttatattttcgaaaatatattttttgagtttataaattttgaaa
tttttcaatttttgcgtNTTATTATTACTCAAAAATCTTTTGGGAAGAAT
TCGACAAAAAtttatgttcttaacttgttcataAGACTTTGGCCACCtta
gccttatgttcttgtatagtttgttcttatagaaaaaatgtGTAAGAGCC
TTTTGAGGCTCAAACAATTCTGTATACAAATAAGAACCATCGTCAACAAA
AATTacttgttcttacaaaaaaaagtatatttcGAAAGATTGTTCCTCTA
ATGAGTCATAATCAAGTACATTCTTATCAAACATGTCATTATGTCCCAAG
AGACTTTTAATAATTATGTACCCTCCTTCAATAATTTTCGAATGCCTAAT
TAAGAAAATTTGTACaattatatttcttttgtttatcacATCCTCCTTTG
GGAATCAATCAAATTATAAAGTAGAGAAAAATGCATACTGAAATTGACAC
GACACACATAAGCAACAAACAGAGGCTTGTGGCAAGAAGACATCAAGAAC
AATTTAAACGCGTTTCACGAAATTTTATCTGCacgatttgaaaatgtttc
ttttcGTCAGTCTTCTGGCAGCTTTTGCTGTTGTTCATGTTCAATCGTAT
GCCTTATTGGAACCTAAAATTGCCGGTAAGTTAACTATGTATTGAAAATC
gagatttttttgaaaggttgttatattttcgaaaatatattttttgagtt
tataaattttgaaatttttcaatttttgcgtACGAGATGCTCTGATATGC
TGGGAGCCGATGCttaaaaaaaagttatcaaaacagCTTTAGCTTTGTTT
AGAAAGGTACTAAaaagctttttataagaacattcaaaattttttaggcc
tgcagatgttctaaacttttttagttttaagccttaaaaatgttcttaaa
atgttcttattttgaccactttgaatatttttgactattttcctaagaaa
tagggtgttttagagtttaaagccttaaaatgttcttaacttgttcttaa
cattttggccagtgaggccttatgttcttttgttcttataaaaaacgtga
acCTTACGCAGAGTTTTCATCATTACACTATTAAAATGGTGGGTAATTAA
GCAAgataattatggaaattctcacaagagcaaaatgactcactcgAAAG
attattaaagaaaattttctataaTTGTATTGGGCGTGCATCATTTCAAA
ATATTCCCAGAATGCAAAAGTAAAAGTATTTTTATGATAACGTCTTGGTT
GTAAACCCTTAGCAGCTTAACCtcttaaaatgttattattCTTAACAATA
TGTTCTttcgggttggtctaaaaagaaGGTTAGCCAATTTGGCTAGGTTG
TAGGGTAGTCGTATATTTCACAAACCAGAGTAAGAAAAAACTTTCTAGAT
GATAATCCTCCATTGGAGCCAGGGGGGGggtaaaattttgtaaaaatatt
ctaATTATTCATTTATGATGCTGAAGATATTCAAAGATTCAACTTAACTT
TAGTATGTTTTATCCAATATTTGAACTTAGACCTTCTGAAGAAGGCTCCT
TTTCTTCTAAGAAACTACTGTAAATAGAAGTATGAAGCTTCAATGGCTAA
ATCAAGTAAGTCGAGCACATTTTACTCATGCGCGACTTCTTtagaaatta
cacaaaaatacttttaaaaatggttcaaaataagaacaatttaagaacat
ttatagTCTTAAAGCTCGCAaagttttttctcaaagaacAGTCGAAGGCT
TAGAAACTtgggattttcttataaaaacgtgtattcctGGATGCTTTTAA
TTGGTCAACAAATATTGACAGTAATACTTCTATTTCATTTAAGAATTTGC
CGTCAAGTGTGATGATGACTCAATTGCTGTTTTTTTAAACAAGACCGCTT
TGGATGAAAGACAAGATGGTATCAACAACAACCGAACATGGCAAATCTAT
TTCGAAGGTCAACGTGGTAATGGTGGTTGTACAACATACCATTGGGATAC
CAGTAAACAAGATGCCAACTTTGGAGCAGGGGGAGCAATAACCAACCCAT
CTGCAGACCTTCCATCTAATGTCCATATCGGCTCGGCAGTCACGAGTTGT
GGAATCAATGTTTTTGCAGACGCCATCAACATTATCTACAACACCACTGT
CATTGTCATGTACGGTGAAAATCCAACTGCTGGAATTGGACGTGAAGAGT
ACAATAAGTATAATGTCATGTGTTTGAGAAACCGCACTGTCGAAaccgat
ttgaaaaattttaatgtcaCTTACATCAAAACTGGAAAAGCCTCTAAAAG
TAAGAAATCTTATGTCTGCAACATAAAACTATATTTTAACGTTATACATt
gtagtctctttaactcgaacctctattattcgaatgtcTTCTAAAAGTTT
TTGGCCCTTCAGTTAATAAGTTAAAAGTTTTACTCTTTAACtctaaattt
ccttaactcgaaagaATTTGTATTCCCTTTCCgtgttcgagttacggaga
ccCCGTTATATTATAGATATGATGTTAGATTGACCTGATTTTGACGCTTC
TGTGTTTGctttaaataactttttcctTTCGATAATGAAGTCCAAACTGA
AGAAGGAGAGAGAAAGCGTTGCAACTTTTAATTACTTTGAGAATAGAcac
agttttttatttttctaaaaaaccgatgcattttgggattgttttggatt
ctattgtaatacactcaaaacaattcaacaatgcatcacttttgtagaaa
aatcaaaaactccgataagttCTATAGTATTGTAACAGatctttgaaaga
aaacaagGGTTATCATATCTATGACGTTTAATTCGATATATTGCTAATCT
ATTCATCTTTACTGTCTAGATAACACTGCGGATTTTGAATTCTCTCTCCT
GCACTCGTCTATCGCCGGTCCCTCGAAACCAGTCTACAAACTTGGAGAAT
ATATCAAATTCACTCTGACAGCAGTGACATCACGAACGGAAATAAAAGGT
GTGATCCAAAGATGTTGGACTACCACTGACGGATCAGCCAACTCGTACGA
TTTAATAAATGGGTAAGATTGATTCAAGCATTCGAGCACGTTCATCtcca
taatttttttataattatttttaagtAAAACTCCTCTTATCGAAAAACCA
AATCTTGCCAGCCAGGTTATTTTAGTTTTCAATAGTTTATATCAGGTTTC
ATGTTCCAATGGATAAGGTCTTTGAGTTGtaccaaattgaaatatcttaa
attaaaaaatattcaaagaacCCCCTCCCTCGCATCCCCAGAACTAAAGC
AGATAAAAATTCGATTTTCTCCTTAGGTGTCAAACAGAACCTGGAACTAC
CTTGGTAATAGTAGCTCATCATAGATCCGTCTTCAAGACCGAAGCTTTCA
GATACTTAGCTTCAGACCATAACAAAATCCATGTTCAATGCATAGTCAAA
GTGTGTTTACAGGCACAAACGGGTTCTGGTTGCGATCAATGTACCGTCTC
TGGGCGTAAAAGACGTAGTTCTGATGACACTACAGAAATTGAAGGATTTG
AAGCACCCACAATGGTTGTCAAGTCACCCGCTTTCTACGTTGTGAAAGGT
ATATTGATTGACTTTCAGGCTCGTCAAAACAGCGGGAGTGTACAGGGTTT
CCAAAACACGAGAGTGGTGACCACGACAGAACACCAACGTTTTCTAACTG
GGATCACACAGAGAAATGGGATGGAATAGAAAAAGTGCTTCTCTGATTAC
CCGAAGTGTTCTGATCGTGTCAATTGAAAACTCTTTTGTTTTACCTGTGT
TTATAAAAGTGGttttatgtttttcgtttttgatccattactttttaaac
tttcagtatccagtaacaaattttacactaacttgtagtctgaaaaatta
tcatcacaatgataccaaattatttctaaaaaaattgatagaaattcatc
aaggacaaatttgatttcttattttcgtgCACCTTAGCTTTTAATCTAAT
TATGTGGTGATGATGCCGTTATATCATTAGAATCGCTAGAAAATGCTAAG
TAAGATCTTTTGGTATAAAAGAGGTctccccaaaatataagcccttaaaC
TTTCCGCATAATTTcacctgaaacaaaagaattttgtcataCCACTCtaa
ttatacaacttttttaaagcaacaacaaagaaaattcattAGCTCAAAAG
AAACTCCCTTAAGGACAAAGGACCTGTTATATGACAAGCCGTTTATCTAT
TGTTctgaagaagctgtttttccatctctttacattcctctggatCACAA
TTCCAGATAGTGAAATCgcctaaattattttttgttactgaaaaaaacag
ttttattcGGAAATACTGTACTTTTTAATTCTGTAGCACCAAAAGAAAAT
CCAATGGTAATAGTTTTCCATATATATAAACTCCTAAAAACACACTTAAG
TTGATCTTGTGTGGCAAGAAATTATTTCGACAAAACGACTTTTCCCTATC
ATTATTGTTGGTTCTTGCAGGCCCTTTCAAAGTATTTCGATTCTCTTTCA
GATTCGACCACAAGCGATAACGATGCTCAAACATCATCCTCCAATATCCT
CAGTGGAACAAACGGATTAATTGTCATCATTCTTTTGGCAACTTTGGTGT
TTGTTATTGCTGCTGCCATTATCAAGAAAGTTTTCTTCAGTTCACCAGCT
GCTGTTGCTTTCCAAGGCCATGTTGTTTCGTATGATAACAAAGCTCTCAC
ATAGATGAAACCTTGTCTTTGCTACAACATTTAAAGACCACGttcattca
tgatattcatgacgtaatgttttctacggattCCGTAGAgaacattacgt
catggataTCATGCATTTGGTTGTAATACTATCGTAAACTTTAAGATATA
CCTTAGTAGTTCtgtattttttacaatatttcaaaCACCTACTTTCCAGT
TACAAATTTTCTCTTCTTTCGACTTAAGATGCGCTGTGGCACGTAAAGTG
CAGCAAATTCGAtccttttttttgctttactGGGTATTGGGTATGGTAGT
ttttaattttacattttttatttttgtaatatctaataaatgattttttt
tgtaaacaaattaatatttttgtgACTCTGTAAATAATAAAATACACTAA
TACGTTTGTACTAAAATTGACAAAGACAACTATATGCATATCAATAGTtc
aattcaaaatcaaaacactttttgcACGACTTTCTGCTTATTTTCTTGAG
TTACACTATAAAAGGGGTCAGGATCGTAGGGAAATGGGCAAAAATGATCA
cagaaatggtcaaaataagaacaatatgAAGTCACAGAATCAGTTGACAA
TATTAATTTtgtcgaccgccggaggcggtttctagACTTCATAGTGGTAC
gttaatctcgttttgccttggctcattactgtgtctaccatttacttccA
GGTTTTTAACttgattacccaggtgtttctctttttttccctgaatgtct
tttattcggaaatgaataatcgagacatgaaaaatgactatattaaATCT
GTTTCAATTAATAATCttaaatgtactggagatgacatgtaggcgttaat
aatgtgcgcgcgctcttgcGCGAGCGTGATGcatgatggaaggcggtcgt
ttcagtgtggttatATCCACACGTGAACTAGTAAGATATATCTTTATTCT
CTTCTACTCTTTAGagtaaataaattattttttacatgGCTAGTACAGTA
ATTTAGGCAAGTTCGCAATGTATGTAGACCTGAAATCGTCGGGTTTTCAC
TACCGTCAAATTCGAAATTGACGGACTTTCACGTCCAACATTTTCGAAGC
GTCTGACGTGCATGCATTGTTAGATCTAAACAATTCGTCAAAGTCTTCAC
TGTGGTAAATTTCGTAAATTGACTGACTTTCATTAAAATCCAATtccatt
aaaggttttgtttttacataagtgttcccgttttatatcagacacaCATT
TCATGTCAGGATAATGTCTTGCTattgctgatataaacaaaaatgttttt
cttttcctctttctggccaatcttgctccacatccgttgAAGATtgtact
ctaatttttgtccccgcagGAAATAACCAGATGAGAAAATCCTCACTGGA
AAATATAGTGCTAtattttccatccccactgaattttctgagtaaaaaac
aatagaattcgagtccccagccataaaaacaagggaatatcaatcctaat
cgagttttggtccgctatttttacccccacttgCTGATAAAACCCCATCG
GGCCTGTGAGAAGGGGGAGTCCTGAAACTTGTTATTTAAGGTAGATACAA
AAAATCTGAACACAGCAAGGTTTGGANgtgagaagggggtgtcctGTAAC
TTGTTATTTAAGGTAGATACAAAAAATCTGAACACAGCAAGGTTTGGATT
TTTCTAAATAACCTGTCgtgatttttaaaacaatagaaaaaaacatcact
gttttcatttgtttgtttgtttgtttatttatcttctttatttttcaatt
tttgaaaaaattttatccttaattctccttggaaatatctttccaacggt
gtgtATAAGTTTCTAACATAGGATAAATGGGTGCTGcgaaaatgcttaaa
aacatACTTTCGAGACAGGCTTAAATTCAAAAGTTTGCTCAACAATCGAA
GCACCAAgatgataaaacaaaaaatagtgCTGTGGTACAAccacttagaa
aaaaaaacaaaaaaaagttggtattctATTCTTGAAAGACTACTCGCACT
CAAAAATTatcgatgttcttataaaaagaacgcTTGTATGCATGTTTATT
TATATCTTTCATTAGAACTCGACCTATAGAACATTAAGTGTGGAATTTGG
GGAAAAACTGTTAAAACATGATCAGAACATTAATTCAAAAGTTTGCTCAA
CAATCGGAGCGTCAATATGATAAAACGTCAAATAGTGCTGCAGTACAGCC
ACTTGGAAAAAAGATTGGTACTCTATTCACAGACTTTTTAGCCTGCTGGC
TTTGTTCGTCGTTCGAGTTATTCGGAAATTTGTTTCGAGCTTTGGTCCTT
AAGTTATTTTTTGTTTCCATTGCTCCCCAAGCATTTACAGTTTTCTCATT
AGTGCGTGTCATGTCTGCAGATCTAAAAAGACCTTTACTAACTTTATATG
GTCCTAAGTAGTAAAATAAGTACCCTCcttcaatcatttttgaatgccta
attaagaaaatttgtacaattatatttcttttgtttatcacATCCTCCTT
TGGGAATTAATAAAATCATAAagtagagaaaaaaaattcagaaatggACA
CGATACACATAAGCAACAAGCAGAGGCTTGTGACAAGAAGAGATCTAGGA
AAACTTATACGCGTTTCACGAAATTTCATCTGCACGACTTGGAAATGTTT
CTTTTCGTCAGTCTTCTGGTGGCTTTTGCTGTTGTTCATGTTCAATCTTA
TGCCTTATTGGAGCCTAAAATAGCCGGTGAGTAAACTATGTATTAAAAAT
CGAGAATTTTTATTTtcggaaatatattttttttaatttttataaatttt
gaaatttttcaatttttgcttaCGAGATTCTCTGATATGCTGGGAGccat
tgattaaaaaaaggCTATCGAAACAACTTTAGCTTTGTTTAGAGACGTAC
TAAAAAGTTGTttactgtacacgttttttttaataagaacatccaaaatt
ttttagaCCTGCAGCCTTATAATGTTtctaacgtgttcttatttttacca
ctttctgaatatttttgatcattttcctaagaaaatgggtgtttttgagt
ccacaaagccttcttatcttgttcttaacattttggccagtgaggcctta
tgttctttaatttgttcttataaaaaacgtgaacCTTACGCAGAGTTTAC
ATCATTACACTATTAAAATGGTGCGTAATTAAGTTAGATAAACTACTGTA
TATAAAAAACATGAAGTTTCAATGGttacaaaaatacttttaaaaatggt
tcaaaataagaacaatttaagaatatttatagTCTTAAAGCTTACAATGT
CTTTTCTCAGAGAACAGCCAAAGGCTTAGAAACTtaggattttcttataa
aaaacgagtaTTCCTGGATTTTTTTAATTGGTCAACACATATTGACAGTG
ATACTTCTATTTTATTTAAGAATTTGCCGTCAAGTGTAATGATGACTCAA
TTGCTGTTTTTTTCAACAAGACCGCTTTGGATGAAAGACAAGATGGTAAC
AATAACAACCGAACATGGCAAATCTATTTCGAAGGTCAACGTGGTGATGC
CTCCTGTACAACATACCATTGGGATACTACCAAACAAGATGCCAACTTTG
GATTAGAGGGAGAAATAAGCAACCCATCTGCAGACCTTCCATCTAATGTC
AATATCGGCTCGGCAGTCACAAGGTGTGGAATCAATGTTTTTGCAGACGC
CATCAACATTATCTACAATACCACTGTCATTGTCATGTACGGTGAAAATC
CAACTGCTGGAATTGGACGTGAAGAGTACAATAAGTATAATGTCATGTGT
TTGAGAAACCGCACTGTCGAAAccgatttggaaaattttaatatCACTTA
CATCAAAACTGGAAAAGCCTCTAAAAGTATGAAATCAAATGTCTGCAACA
TAAAActatattttaattttatacattgtagtctctttaactcgaacctc
tattattcgaatgtctccttaactaaAAGTTTTTGGCCCTTCACGAGTTA
ATAAGATAAAACTtttaccccggggggggggtactacccttgtcgaccga
cgggggtgctccgctgaggttcgaaaaatggaccctatgtgggactcgaa
atttgcgaaaaaagtgaccctgaatgggactgaaattccaaaattttctc
aaattttctactttttcccaaaatttccaaaaaaaggcaccctacgaggg
actgatttttctattttggtgtttttgcgaccctacctgggactcgtgga
ggttataaaaggtaccctgaccagcggagcatccccgtaacccatcttgc
cctagtaccccccccccgggacttttacttttttactctaaatttcctta
actcgaacgaaTTTGTGTTCCCCTTCCGTGTTCAAGTTACGGAGACCGCG
TTATATTATAGATAGGATGTTAGATTGACCTGATTTTGACGCTTCTGTGT
TTGctttaaataactttttcctTTTGATAATGGTAAGTCCAAAATGAAGA
AGGAGAAAGTATGCGatccaatttttatttattttgagaaTAGTATTGTA
ACAGACTTGAAAGAAAACGAGGATTATTATGACGTTTAATTCGATATATT
GCTAATCTATTCATCTTTACTATCTAGATGACACTGCTGACTTTGTATTC
TCTCTCACGCACTCATCTATCGCTGGCCCCTCGAAACCAGTGTACAAAGT
TGGTGAATATATCAAATTCACTCTATTCCTGACATCACTACGAACGGAAG
TAAAAGTTGTGATCCAAAGATGCTGGACTACCACTGACGGATCAGCCAAC
TCGTACGATTTAATAAATGGGTGAGATTGATTCAAGCATTCGAGCACGTT
CATCtccataatttttttataattatttttaagtAAAACTCCTCTTATCG
AAAAACCAAATCTTGCCAGCCAGGTTATTTTAGTTTTCAATAGTTATTGT
CAGGTTTCATGTTCCAATGGATAAGGTCTTTGAGTTGtaccaaattgaaa
tattttaaattaaaaaatattcaaagaacTCCCTTCCTCATATCCCCGGA
ACTAAAGcagataaaaatttgattttctcttTAGGTGTCAAACGGAACCT
GGAACTAGCTGGATATCAGCAACTGAAGCAATATCCACCTTTAAGACCGA
AGCTTTCAGATACTTATCTGCCTCTGAAAACAAAATCTTTGCTCAATGCC
TTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTGC
CCTCCTACTCTCAAACGTAAGAGACGTAGTaccgaagaagaagaaaaaac
cagTGTTAGACAAATGGCTTTGGTCAAATCTCCAGTTTTCTACATCATTG
ATAAAGGTAGGTAGATTAAGAAGTGATGATCGAGTGATCTAAGATGTCAG
TATTACGATCTGGAAAACGGAAAATCAAGGCGGCTTTTTTCGaatgtaaa
aatccagggtgtggtcagtaaaacgaggtcgaaaaatccTCTAGGAGGAA
GCTTTGGGTTTCATTATTTACTGTATGTTTGTGTCGATTAATGCCTATTT
GCTGATACAGAGGGACTTCAACAAGAGGTAACCAAACGGAACATAAAGAT
ATTCCTTTTCacaatattttgttcttttataGATACTCCAGCCCAAGGAA
ACCAAGAATCTTCAAGTGTCCTCAGTGGAACAAATGGATTGATTGTCATC
ATTCTTTTGGCAACTTTGGTGTTTGCTATTGCTGCTGCCATTGTCAAGAA
AGTTTTCTTCAGTGCTCNCTTAGCAACTTTGGTGTTTGTCATTGCTGCTG
CCATTGTCAAGAAAGTTTTCTTCAGTTCACCAGCTGCTGTTGCTTTCCAA
GGGCATGTTGTTTCGTATGATAACAAAGCTCTCAC

Coding sequence (CDS) from alignment at sc0000453:244885..255869+

>TCONS_00023401 ID=TCONS_00023401|Name=TCONS_00023401|organism=Clytia hemisphaerica|type=CDS|length=7524bp|location=Sequence derived from alignment at sc0000453:244885..255869+ (Clytia hemisphaerica)
atgtttcttttcGTCAGTCTTCTGGCAGCTTTTGCTGTTGTTCATGTTCA
ATCGTATGCCTTATTGGAACCTAAAATTGCCGAATTTGCCGTCAAGTGTG
ATGATGACTCAATTGCTGTTTTTTTAAACAAGACCGCTTTGGATGAAAGA
CAAGATGGTATCAACAACAACCGAACATGGCAAATCTATTTCGAAGGTCA
ACGTGGTAATGGTGGTTGTACAACATACCATTGGGATACCAGTAAACAAG
ATGCCAACTTTGGAGCAGGGGGAGCAATAACCAACCCATCTGCAGACCTT
CCATCTAATGTCCATATCGGCTCGGCAGTCACGAGTTGTGGAATCAATGT
TTTTGCAGACGCCATCAACATTATCTACAACACCACTGTCATTGTCATGT
ACGGTGAAAATCCAACTGCTGGAATTGGACGTGAAGAGTACAATAAGTAT
AATGTCATGTGTTTGAGAAACCGCACTGTCGAAaccgatttgaaaaattt
taatgtcaCTTACATCAAAACTGGAAAAGCCTCTAAAAATAACACTGCGG
ATTTTGAATTCTCTCTCCTGCACTCGTCTATCGCCGGTCCCTCGAAACCA
GTCTACAAACTTGGAGAATATATCAAATTCACTCTGACAGCAGTGACATC
ACGAACGGAAATAAAAGGTGTGATCCAAAGATGTTGGACTACCACTGACG
GATCAGCCAACTCGTACGATTTAATAAATGGGTGTCAAACGGAACCTGGA
ACTAGCTGGATATCAGCAACTGAAGCAATATCCACCTTTAAGACCGAAGC
TTTCAGATACTTATCTGCCTCTGAAAACAAAATCTTTGCTCAATGCCTTG
TCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTGCCCT
CCTACTCTCAAACGTAAGAGACGTAGTaccgaagaagaagaaaaaaccag
TGTTAGACAAATGGCTTTGGTCAAATCTCCAGTTTTCTACATCATTGATA
AAGATACTCCAGCCCAAGGAAACCAAGAATCTTCAAGTGTCCTCAGTGGA
ACAAATGGATTGATTGTCATCATTCTTTTGGCAACTTTGGTGTTTGCTAT
TGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCNCTTAGCAACTT
TGGTGTTTGTCATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTTCA
CCAGCTGCTGTTGCTTTCCAAGGGCATGTTGTTTCGTATGATAACAAAGC
TCTCatgtttcttttcGTCAGTCTTCTGGCAGCTTTTGCTGTTGTTCATG
TTCAATCGTATGCCTTATTGGAACCTAAAATTGCCGAATTTGCCGTCAAG
TGTGATGATGACTCAATTGCTGTTTTTTTAAACAAGACCGCTTTGGATGA
AAGACAAGATGGTATCAACAACAACCGAACATGGCAAATCTATTTCGAAG
GTCAACGTGGTAATGGTGGTTGTACAACATACCATTGGGATACCAGTAAA
CAAGATGCCAACTTTGGAGCAGGGGGAGCAATAACCAACCCATCTGCAGA
CCTTCCATCTAATGTCCATATCGGCTCGGCAGTCACGAGTTGTGGAATCA
ATGTTTTTGCAGACGCCATCAACATTATCTACAACACCACTGTCATTGTC
ATGTACGGTGAAAATCCAACTGCTGGAATTGGACGTGAAGAGTACAATAA
GTATAATGTCATGTGTTTGAGAAACCGCACTGTCGAAaccgatttgaaaa
attttaatgtcaCTTACATCAAAACTGGAAAAGCCTCTAAAAATAACACT
GCGGATTTTGAATTCTCTCTCCTGCACTCGTCTATCGCCGGTCCCTCGAA
ACCAGTCTACAAACTTGGAGAATATATCAAATTCACTCTGACAGCAGTGA
CATCACGAACGGAAATAAAAGGTGTGATCCAAAGATGTTGGACTACCACT
GACGGATCAGCCAACTCGTACGATTTAATAAATGGGTGTCAAACGGAACC
TGGAACTAGCTGGATATCAGCAACTGAAGCAATATCCACCTTTAAGACCG
AAGCTTTCAGATACTTATCTGCCTCTGAAAACAAAATCTTTGCTCAATGC
CTTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACACTTTG
CCCTCCTACTCTCAAACGTAAGAGACGTAGTaccgaagaagaagaaaaaa
ccagTGTTAGACAAATGGCTTTGGTCAAATCTCCAGTTTTCTACATCATT
GATAAAGATACTCCAGCCCAAGGAAACCAAGAATCTTCAAGTGTCCTCAG
TGGAACAAATGGATTGATTGTCATCATTCTTTTGGCAACTTTGGTGTTTG
CTATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCNCTTAGCA
ACTTTGGTGTTTGTCATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAG
TTCACCAGCTGCTGTTGCTTTCCAAGGGCATGTTGTTTCGTATGATAACA
AAGCTCTCatgtttcttttcGTCAGTCTTCTGGCAGCTTTTGCTGTTGTT
CATGTTCAATCGTATGCCTTATTGGAACCTAAAATTGCCGAATTTGCCGT
CAAGTGTGATGATGACTCAATTGCTGTTTTTTTAAACAAGACCGCTTTGG
ATGAAAGACAAGATGGTATCAACAACAACCGAACATGGCAAATCTATTTC
GAAGGTCAACGTGGTAATGGTGGTTGTACAACATACCATTGGGATACCAG
TAAACAAGATGCCAACTTTGGAGCAGGGGGAGCAATAACCAACCCATCTG
CAGACCTTCCATCTAATGTCCATATCGGCTCGGCAGTCACGAGTTGTGGA
ATCAATGTTTTTGCAGACGCCATCAACATTATCTACAACACCACTGTCAT
TGTCATGTACGGTGAAAATCCAACTGCTGGAATTGGACGTGAAGAGTACA
ATAAGTATAATGTCATGTGTTTGAGAAACCGCACTGTCGAAaccgatttg
aaaaattttaatgtcaCTTACATCAAAACTGGAAAAGCCTCTAAAAATAA
CACTGCGGATTTTGAATTCTCTCTCCTGCACTCGTCTATCGCCGGTCCCT
CGAAACCAGTCTACAAACTTGGAGAATATATCAAATTCACTCTGACAGCA
GTGACATCACGAACGGAAATAAAAGGTGTGATCCAAAGATGTTGGACTAC
CACTGACGGATCAGCCAACTCGTACGATTTAATAAATGGGTGTCAAACGG
AACCTGGAACTAGCTGGATATCAGCAACTGAAGCAATATCCACCTTTAAG
ACCGAAGCTTTCAGATACTTATCTGCCTCTGAAAACAAAATCTTTGCTCA
ATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGTACAC
TTTGCCCTCCTACTCTCAAACGTAAGAGACGTAGTaccgaagaagaagaa
aaaaccagTGTTAGACAAATGGCTTTGGTCAAATCTCCAGTTTTCTACAT
CATTGATAAAGATACTCCAGCCCAAGGAAACCAAGAATCTTCAAGTGTCC
TCAGTGGAACAAATGGATTGATTGTCATCATTCTTTTGGCAACTTTGGTG
TTTGCTATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTCNCTT
AGCAACTTTGGTGTTTGTCATTGCTGCTGCCATTGTCAAGAAAGTTTTCT
TCAGTTCACCAGCTGCTGTTGCTTTCCAAGGGCATGTTGTTTCGTATGAT
AACAAAGCTCTCatgtttcttttcGTCAGTCTTCTGGCAGCTTTTGCTGT
TGTTCATGTTCAATCGTATGCCTTATTGGAACCTAAAATTGCCGAATTTG
CCGTCAAGTGTGATGATGACTCAATTGCTGTTTTTTTAAACAAGACCGCT
TTGGATGAAAGACAAGATGGTATCAACAACAACCGAACATGGCAAATCTA
TTTCGAAGGTCAACGTGGTAATGGTGGTTGTACAACATACCATTGGGATA
CCAGTAAACAAGATGCCAACTTTGGAGCAGGGGGAGCAATAACCAACCCA
TCTGCAGACCTTCCATCTAATGTCCATATCGGCTCGGCAGTCACGAGTTG
TGGAATCAATGTTTTTGCAGACGCCATCAACATTATCTACAACACCACTG
TCATTGTCATGTACGGTGAAAATCCAACTGCTGGAATTGGACGTGAAGAG
TACAATAAGTATAATGTCATGTGTTTGAGAAACCGCACTGTCGAAaccga
tttgaaaaattttaatgtcaCTTACATCAAAACTGGAAAAGCCTCTAAAA
ATAACACTGCGGATTTTGAATTCTCTCTCCTGCACTCGTCTATCGCCGGT
CCCTCGAAACCAGTCTACAAACTTGGAGAATATATCAAATTCACTCTGAC
AGCAGTGACATCACGAACGGAAATAAAAGGTGTGATCCAAAGATGTTGGA
CTACCACTGACGGATCAGCCAACTCGTACGATTTAATAAATGGGTGTCAA
ACGGAACCTGGAACTAGCTGGATATCAGCAACTGAAGCAATATCCACCTT
TAAGACCGAAGCTTTCAGATACTTATCTGCCTCTGAAAACAAAATCTTTG
CTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGAATGT
ACACTTTGCCCTCCTACTCTCAAACGTAAGAGACGTAGTaccgaagaaga
agaaaaaaccagTGTTAGACAAATGGCTTTGGTCAAATCTCCAGTTTTCT
ACATCATTGATAAAGATACTCCAGCCCAAGGAAACCAAGAATCTTCAAGT
GTCCTCAGTGGAACAAATGGATTGATTGTCATCATTCTTTTGGCAACTTT
GGTGTTTGCTATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGTGCTC
NCTTAGCAACTTTGGTGTTTGTCATTGCTGCTGCCATTGTCAAGAAAGTT
TTCTTCAGTTCACCAGCTGCTGTTGCTTTCCAAGGGCATGTTGTTTCGTA
TGATAACAAAGCTCTCatgtttcttttcGTCAGTCTTCTGGCAGCTTTTG
CTGTTGTTCATGTTCAATCGTATGCCTTATTGGAACCTAAAATTGCCGAA
TTTGCCGTCAAGTGTGATGATGACTCAATTGCTGTTTTTTTAAACAAGAC
CGCTTTGGATGAAAGACAAGATGGTATCAACAACAACCGAACATGGCAAA
TCTATTTCGAAGGTCAACGTGGTAATGGTGGTTGTACAACATACCATTGG
GATACCAGTAAACAAGATGCCAACTTTGGAGCAGGGGGAGCAATAACCAA
CCCATCTGCAGACCTTCCATCTAATGTCCATATCGGCTCGGCAGTCACGA
GTTGTGGAATCAATGTTTTTGCAGACGCCATCAACATTATCTACAACACC
ACTGTCATTGTCATGTACGGTGAAAATCCAACTGCTGGAATTGGACGTGA
AGAGTACAATAAGTATAATGTCATGTGTTTGAGAAACCGCACTGTCGAAa
ccgatttgaaaaattttaatgtcaCTTACATCAAAACTGGAAAAGCCTCT
AAAAATAACACTGCGGATTTTGAATTCTCTCTCCTGCACTCGTCTATCGC
CGGTCCCTCGAAACCAGTCTACAAACTTGGAGAATATATCAAATTCACTC
TGACAGCAGTGACATCACGAACGGAAATAAAAGGTGTGATCCAAAGATGT
TGGACTACCACTGACGGATCAGCCAACTCGTACGATTTAATAAATGGGTG
TCAAACGGAACCTGGAACTAGCTGGATATCAGCAACTGAAGCAATATCCA
CCTTTAAGACCGAAGCTTTCAGATACTTATCTGCCTCTGAAAACAAAATC
TTTGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTAGCGCTGA
ATGTACACTTTGCCCTCCTACTCTCAAACGTAAGAGACGTAGTaccgaag
aagaagaaaaaaccagTGTTAGACAAATGGCTTTGGTCAAATCTCCAGTT
TTCTACATCATTGATAAAGATACTCCAGCCCAAGGAAACCAAGAATCTTC
AAGTGTCCTCAGTGGAACAAATGGATTGATTGTCATCATTCTTTTGGCAA
CTTTGGTGTTTGCTATTGCTGCTGCCATTGTCAAGAAAGTTTTCTTCAGT
GCTCNCTTAGCAACTTTGGTGTTTGTCATTGCTGCTGCCATTGTCAAGAA
AGTTTTCTTCAGTTCACCAGCTGCTGTTGCTTTCCAAGGGCATGTTGTTT
CGTATGATAACAAAGCTCTCatgtttcttttcGTCAGTCTTCTGGCAGCT
TTTGCTGTTGTTCATGTTCAATCGTATGCCTTATTGGAACCTAAAATTGC
CGAATTTGCCGTCAAGTGTGATGATGACTCAATTGCTGTTTTTTTAAACA
AGACCGCTTTGGATGAAAGACAAGATGGTATCAACAACAACCGAACATGG
CAAATCTATTTCGAAGGTCAACGTGGTAATGGTGGTTGTACAACATACCA
TTGGGATACCAGTAAACAAGATGCCAACTTTGGAGCAGGGGGAGCAATAA
CCAACCCATCTGCAGACCTTCCATCTAATGTCCATATCGGCTCGGCAGTC
ACGAGTTGTGGAATCAATGTTTTTGCAGACGCCATCAACATTATCTACAA
CACCACTGTCATTGTCATGTACGGTGAAAATCCAACTGCTGGAATTGGAC
GTGAAGAGTACAATAAGTATAATGTCATGTGTTTGAGAAACCGCACTGTC
GAAaccgatttgaaaaattttaatgtcaCTTACATCAAAACTGGAAAAGC
CTCTAAAAATAACACTGCGGATTTTGAATTCTCTCTCCTGCACTCGTCTA
TCGCCGGTCCCTCGAAACCAGTCTACAAACTTGGAGAATATATCAAATTC
ACTCTGACAGCAGTGACATCACGAACGGAAATAAAAGGTGTGATCCAAAG
ATGTTGGACTACCACTGACGGATCAGCCAACTCGTACGATTTAATAAATG
GGTGTCAAACGGAACCTGGAACTAGCTGGATATCAGCAACTGAAGCAATA
TCCACCTTTAAGACCGAAGCTTTCAGATACTTATCTGCCTCTGAAAACAA
AATCTTTGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAAACTAGCG
CTGAATGTACACTTTGCCCTCCTACTCTCAAACGTAAGAGACGTAGTacc
gaagaagaagaaaaaaccagTGTTAGACAAATGGCTTTGGTCAAATCTCC
AGTTTTCTACATCATTGATAAAGATACTCCAGCCCAAGGAAACCAAGAAT
CTTCAAGTGTCCTCAGTGGAACAAATGGATTGATTGTCATCATTCTTTTG
GCAACTTTGGTGTTTGCTATTGCTGCTGCCATTGTCAAGAAAGTTTTCTT
CAGTGCTCNCTTAGCAACTTTGGTGTTTGTCATTGCTGCTGCCATTGTCA
AGAAAGTTTTCTTCAGTTCACCAGCTGCTGTTGCTTTCCAAGGGCATGTT
GTTTCGTATGATAACAAAGCTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013166XLOC_013166Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023401-proteinTCONS_00023401-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023401-exon-sc0000453-1491911889:244885..245058TCONS_00023401-exon-sc0000453-1491911889:244885..245058Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1510915933:244885..245058TCONS_00023401-exon-sc0000453-1510915933:244885..245058Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1575043694:244885..245058TCONS_00023401-exon-sc0000453-1575043694:244885..245058Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1491911889:245773..245809TCONS_00023401-exon-sc0000453-1491911889:245773..245809Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1510915933:245773..245809TCONS_00023401-exon-sc0000453-1510915933:245773..245809Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1575043694:245773..245809TCONS_00023401-exon-sc0000453-1575043694:245773..245809Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1491911889:247028..247483TCONS_00023401-exon-sc0000453-1491911889:247028..247483Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1510915933:247028..247483TCONS_00023401-exon-sc0000453-1510915933:247028..247483Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1575043694:247028..247483TCONS_00023401-exon-sc0000453-1575043694:247028..247483Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1491911889:248054..248246TCONS_00023401-exon-sc0000453-1491911889:248054..248246Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1510915933:248054..248246TCONS_00023401-exon-sc0000453-1510915933:248054..248246Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1575043694:248054..248246TCONS_00023401-exon-sc0000453-1575043694:248054..248246Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1491911889:255069..255340TCONS_00023401-exon-sc0000453-1491911889:255069..255340Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1510915933:255069..255340TCONS_00023401-exon-sc0000453-1510915933:255069..255340Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1575043694:255069..255340TCONS_00023401-exon-sc0000453-1575043694:255069..255340Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1491911889:255617..255869TCONS_00023401-exon-sc0000453-1491911889:255617..255869Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1510915933:255617..255869TCONS_00023401-exon-sc0000453-1510915933:255617..255869Clytia hemisphaericaexon
TCONS_00023401-exon-sc0000453-1575043694:255617..255869TCONS_00023401-exon-sc0000453-1575043694:255617..255869Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000453supercontigsc0000453:244885..255869 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
363.038	343.686	469.76	506.887	2187.38	1610.73	1177.01	1285.48	1291.25	1620.66	995.384	1050.74	0.942443	0.410986	0	0	1.38129	1.68378	2.94879	0.454459	0	2.65316e-09	4.69534	0.00123627	0.999988	0.746877	5.04029	7.29327	57.8843	61.3401
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001507ZP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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