TCONS_00023158 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023158
Unique NameTCONS_00023158
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3549

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023158 ID=TCONS_00023158|Name=TCONS_00023158|organism=Clytia hemisphaerica|type=transcript|length=3549bp
ACAGAGGCCAGTGAAAGGGATTTACTCCAACAAAATGAACAACTACGTGA
CGTCATCAAAGAAATGCGACTTGAAATGGAACAATTGATACAGCATGATG
AACCAACACGTGGAAATCAAGATGATGATAACCACCAggctttgagagaa
aaaatcacAGAACTGGAAAAGGAAAATGAGAAACTCGTCCTGAAACTTGA
AGAAGCAAACAAATCAAAGAAGCCTCCTTCTGGATCACCGAAATCCGTAC
CGGTCGACTTTTCAAACCAAAGGGAACTTCGAGAACACCTTAAAGAACTC
AATGAAACCATCTGTTATCTACGGAACGAAAAAGTTCAACTGAGTGCTTT
CTTGACATCCAAAGACGCAAAGATCAGACATCTCCACAAAACTATATTAC
AAAGTGAGCAAGAGAAACAAGATTTGTTGCTACAACTAGAAAACATGAAA
TACAATCAACGCTCGCATGACCAGCTAGATCACCAAGCGATTAAAACCAT
GAAGGATCGTATTTCTGAACTTGAATTGCAACTTGAAGAATCGCAATCAC
AAGCACAAGCTTACTTTAAAGGTGCTCTCGAAAGAAATTTAGATGCTACA
CAAATTAGTAAAAAGCTATCGCAATCAAAGTTCAAAGGACTGGGCGCGAA
TAGTGAAGATCAGAATGCTGTGATTGACACCCTGCGAAAAGAgatgaaaa
atctgaaagaGAAGTTACGGTCTGCAGTGGAGCGCATCAAATCGTTGGGT
ATTGAACGACAGAAATTGATCGATGTCGGTAATCGATTGCGTGCACAAAT
CCAACAAGCAAAGACCACTCATCAAGAAGAGGAAGTTCCCGCAAACAACA
AACTGGCCACACACGAAAACAACGAATACACATCCACCCTACAGCAACTT
CGTCATCAAGGTGTAACCAGGGAGAATGTACACGTGCATATTAACAACCA
ATCAGCTTTGAGCTCACTCGACGGAACTAGAACACCCCCTGTAAGAGATA
CTGACAGAGGAATGACGTCACCTCCTTTGAACATTACATCATCAGAGAAC
TCGTCCCTCAGAGAGGTCTGGAAACTACTGGAAGAAGGTTCCCATATTTC
CATACCAAGCTCTATAGAAGTGGAAAAGGATGACCTTATGATTGCAGGCA
AACCTTTAGAGAGACAACAAAAATCGACTCTATCAGTACGAAATGTCGCA
ATCAAATTACCTGCgtcaaagaaaaaacaacaaagaaacaTACGCAATTA
TAACGAGCGTAGTTGAAACATCTCAATTTCACATCATAATTGTTGAAGGG
AATTCAATATGCAAACTATTATAANTGGAAACTACTGGAAGAAGGTTCCC
ATATTTCCATACCAAGCTCTATAGAAGTGGAAAAGGATGAGCTAATGATT
GCAGGTAAACCTTTAGAGAGACAACAAAAATCGACTCTATCAGTACGAAA
TGTCGCAATCAAATTACCTGCgtcaaagaaaaaacaacaaagaaacaTAC
GCAATTATAACGAGCGTAGTTGAAACATCTCAATTTCACATCATAATTGT
TGAAGGGAATTCAATATGCAAACTATTATAACTTTGTATGGAATCCGTCT
GGACAGATTCGCATGCTATTGATTGCAAGCATGGCTGCTTCTCAGACCTT
CGACACTGAGGATAAACCACTAAAAAGAGGCGACACTCCGTCTTTTTCTT
TGAGACAAAGACCTCAGAAGAAAATCCTTTCTATGGAGGAAGAGTTTGAA
CAAATACGGAAATGTCGATACATCCGAAAAACACCATTACAGCGAGTTGA
TTCTGAAAATATCGACCTTGATATTTCGTTCCTCAGTGCGAAAACTATTG
ATCAGAATGCTAATCTATCGGCTAAAACTGGTTTATCGAGTATATCGGAG
AGTGTCGATGAAGATGAAGAATCAAAAGCAATCGAACATAAAACTCAAGA
GACTCCACAAATTACAAAGGCGAATACAGGTCGAATTGTGGTCAGACCTC
GATCGCCTATTCAACCATTTATTGTACACGATACACAGTTGAAAAGAGAT
AAACTGGAACCGACGCTCATAACTGAATTTAATAACAAGTGTTCTGTTGA
AACTAAGAAGAAATCCAAGAGTATTCTCAAGCGAGCGACTAAACCTGTTG
GTAAACTTGACTTGTTGTATAAAGAGGTTTCCCGTGCGGCACGTCAGGCG
GACGTCGATCTAAACGCGGCCGTTCAAAGCATACGAGACGATCAAGAACA
AGATAAAAGGTTTGAGAGACTTCAAAGGTCTGATCAGAGTGTGAGAAGAT
GGAATTATATCGGCCGTCTTGTTCGTTCTGGTTGGTTGTTCGGAAGAAGA
GGTAGATCACTCAAACTGTTTGAAGATCGAAAACGAAAGCGTAGGATGAA
TGCAATGAATTTGGAGCACCTCCCGATATCTTACAAAGCGTCTGTTGGCA
CGCTACGTGAACAACAATCCTCNCTTTGTATGGAATCCGTCTGGACAGAT
TCGCATGCTATTGATTGCAAGCATGGCTGCTTCTCAGACCTTCGACACTG
AGGATAAACCACTAAAAAGAGGCGACACTCCGTCTTTTTCTTTGAGACAA
AGACCTCAGAAGAAAATCCTTTCTATGGAGGAAGAGTTTGAACAAATACG
GAAATGTCGATACATCCGAAAAACACCATTACAGCGAGTTGATTCTGAAA
ATATCGACCTTGATATTTCGTTCCTCAGTGCGAAAACTATTGATCAGAAT
GCTAATCTATCGGCTAAAACTGGTTTATCGAGTATATCGGAGAGTGTCGA
TGAAGATGAAGAATCAAAAGCAATCGAACATAAAACTCAAGAGACTCCAC
AAATTACAAAGGCGAATACAGGTCGAATTGTGGTCAGACCTCGATCGCCT
ATTCAACCATTTATTGTACACGATACACAGTTGAAAAGAGATAAACTGGA
ACCGACGCTCATAACTGAATTTAATAACAAGTGTTCTGTTGAAACTAAGA
AGAAATCCAAGAGTATTCTCAAGCGAGCGACTAAACCTGTTGGTAAACTT
GACTTGTTGTATAAAGAGGTTTCCCGTGCGGCACGTCAGGCGGACGTCGA
TCTAAACGCGGCCGTTCAAAGCATACGAGACGATCAAGAACAAGATAAAA
GGTTTGAGAGACTTCAAAGGTCTGATCAGAGTGTGAGAAGATGGAATTAT
ATCGGCCGTCTTGTTCGTTCTGGTTGGTTGTTCGGAAGAAGAGGTAGATC
ACTCAAACTGTTTGAAGATCGAAAACGAAAGCGTAGGATGAATGCAATGA
ATTTGGAGCACCTCCCGATATCTTACAAAGCGTCTGTTGGCACGCTACGT
GAACAACAATCCTCACAAATCACCACCATACAACAACGATTGACCAACAG
TCGATCCTTGCCACCTGTACAACACAACCGTTCGAAATCCGTCAAAGGGA
ACTCTTCGCCACGAACTTTACCTTCTCTCAGTAAACAAATGCACAGAAAT
GTTGACAGGAGTCGATCGCTCCCGGCTATTCATAAACCAAActttttat
Run BLAST on NCBI

transcript from alignment at sc0000444:137548..151781+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023158 ID=TCONS_00023158|Name=TCONS_00023158|organism=Clytia hemisphaerica|type=transcript|length=14234bp|location=Sequence derived from alignment at sc0000444:137548..151781+ (Clytia hemisphaerica)
ACAGAGGCCAGTGAAAGGGATTTACTCCAACAAAATGAACAACTACGTGA
CGTCATCAAAGAAATGCGACTTGAAATGGAACAATTGATACAGCATGATG
AACCAACACGTGGAAATCAAGATGATGGTAatataaaaatcttaaaatta
caTTACCACGATAAGGATCTTTTTGGCTGATTTACGAATAATTAATTACT
TAGACACAAATCCTTCAAGTCTTTTTAAGTGATTTAGCTCATTATAAGAT
AAACATGGATTTTTAAATTACTTTATTGGTTATTTTTTTGTccataaaaa
tcaaatttttgcgggaataAATTCCGGTTGTAAAATAGAACAATACTGAC
GATacaaaattcaatcaaaacacgccaaatttggaaaatcaccTAAATCA
ATACTCGGTGCGAAATTTCTGACATTAAGTATGAAAGCCTATGGTTTAGA
TTTTAATAATTGATCTACAAATTAATTTGTAGATAACCACCAggctttga
gagaaaaaatcacAGAACTGGAAAAGGAAAATGAGAAACTCGTCCTGAAA
CTTGAAGAAGCAAACAAATCAAAGAAGCCTCCTTCTGGATCACCGAAATC
CGTACCGGTCGACTTTTCAAACCAAAGGGAACTTCGAGAACACCTTAAAG
AACTCAATGAAACCATCTGTAAGAACTTCCCATGAAAtgtgaaaattgtg
aaaaaattaCTGACATTTTTCGTGCCAGCTTTGATGGCTGATTATTGATA
CTAGAAAAAATCATATAAAACCTTTCTGATCAGTAATAATCTACACTTTT
TCTCAGGTGAAGTTTATATGAATTTTTTAATGGTTATAACATTTTTCTGC
AGGTTATCTACGGAACGAAAAAGTTCAACTGAGTGCTTTCTTGACATCCA
AAGACGCAAAGATCAGACATCTCCACAAAACTATATTACAAAGTGAGCAA
GAGAAACAAGATTTGTTGCTACAACTAGAAAACATGAAATACAATCAACG
CTCGCATGACCAGCTAGATCACCAAGCGATTAAAACCATGAAGGATCGTA
TTTCTGAACTTGAATTGCAACTTGAAGAATCGCAATCACAAGCACAAGCT
TACTTTAAAGGTGCTCTCGAAAGAAATTTAGATGCTACACAAATTAGTAA
AAAGGTACAAAACATTTATTTCTCTTATAAAATATTCAAATGTAACTCAT
ATCACATAATGCTTAATAATTTGCATAATTTCCCTTATACTTTCTTTAAA
AACCCTAAAGTATCAGTTGAGCTCGTTTTCCGAAATAGAAATCAATCAAA
TCACGTGACTTCTTCAAGCGTACTGAAATAATTTGCtaacaaacttggaa
attttactcaaaaacataaaataatctGTGTGTGTTTTACACTGTTACAT
TGTTCCTTCTATCAGTTTGACCGTCTTATGAAGCCTATTAATCAACACCG
TTACTATAATTGGAGATAAGAACGATCTCAACGGTACTTTCAAATGTACG
TAGTCGTACTTCGTGTCCCAGTTAAATATGATGTAACATCATTAACTGTG
ATGATCTGAAGTATCTTGAGAGTATGTTGAGAACGAGAATTTCATTGTGT
TTGCAAATAGTCACATTTCTCCTCCATATAATTTCACGACGTTGATTCCT
TGTCCGGTAAAGGGCTCAGAATGATCCTGCCTCTGGCTCTCTCCTTTTCC
TTCTTTTCTTTCTCCAGTCGATGCCATTTCTCGAACATGGTTTCTATATT
CGACGCCACGTCCATGTGTTTGACAACCTCGTCCTCATTCTCCTCTGATG
ACGTCAATCTCGGTGCCGGTATTTCGTACGGAAgctttttactcaatttt
gCTAAGTCTCTGTTTTCTTGATCTTTATCGTAATTTCGGGCGTTGGCTGC
GCGATAGATGACCTCTGGTTTCACTTTCCCGATGTACTGAAATTAAAATC
GAAAAGagtttttaaagaatttaatgACATCAAGGGTAGAAAATTCAAAG
AGAAGAAAATATGCTGCTAGATGATACAAAATAATGGAAAATGACGGAAT
AGATTCAAAAATAGTTTTCCAAAATTAATATGATGGCCGTTCGAAATTAG
AATGTCCTGCTTGGAAAGTTTGCGTTAGGATGCTAATAGTACTTGTTTAA
AACTNTTTCGAAATTAGAATGTTCTGCGTGGAAAGTTTGCGTCGGGATGC
TAAGTAGTTGATTTGTTTCGATCGAATGATAGTAGCATCGagtagaaaat
tgaaaaaatgaattgtgttcttaccGTGGAGACGAGAATTTCAACGGATG
ATTTCATTACTTGATCAGGAATCAATTTGACTTGTTTACGGAACTCTTCG
GTCATTATAATCTTCTCTTCTGGTGAATTCAAATTCAACACTTTGATCAC
TTCATAATGGTTGCCAAGGGAACAAAAAGTCGGCACTTTATTGCCGATTA
CGATACCGACTCCTGGCCCACCGTGCAATGTGATTCGTAGATGCAATTTT
CTGTTTCGTATATGTCGCCATGGGAACAGGTCGCGTGCATTTGCAATCTT
GATTGCAACTGAAAGAAGATCTTGAGATGTAGATTCTGTTGTGAAGCCTT
GGACACCGGAACAAAACATTATCTCCTCACGGAAGGTATACAGGCGGTAC
ACATTACGGAAGTTCACCAGCACCTTCTCCACCAGTTTGTGGAAATCGTT
CAAAATATCGATACATTGAGCTGCTGGATATCCAAGTCTGGTGAACTCGT
GCACTGTAACCATCAAAAGACCTTGATCTGGAATATCATAATGCTCCACA
GCTTGCCCTCcttctttcaaaatggcgtCACCAATAGGTTTTGGAAGTGT
CTTATATAAGAACTCGTTATTTTTATTGCGTTCTTTGTGCAACACATCTG
TACCCTCTTTGACAGATTTTTCCAAACCTCTCGTATATTTTTCCATCATA
CTGATCATGTTATCAATAATCTCCACCTTGTTGCCACGAATTTGTTTTGT
GATTGGTCTTACTTGTCGGAAGGTCGGTCGTAGGTCGGGATTCTCGCTCC
AACAACTCTTCATCAATTCCACTAATTTCTCGTTTAATCCAATCTTGAGG
GTGACATGTGGGCGGAAGGGTGGAATACATCTTTTCCGTATATAATGAAT
GATTTCATGAGGTTGCATTTCTTCGCGTTCAGTATAAGGTGGTTGTTGGT
TGATAATTTCTGATACAATGATTCCAAAACTGAACACGTCACCAGCCCTG
CTCATCTTCTCTGGTAGTGTCAGATTCTCAGGTGCAGTCCATAACAAATC
CACACACCTCTTATGTTCATATTCCGAATCGGTTTCAGTCTTTCGCTCAA
AATCATCCGGTTTCCGAAAATTTGTTAACCCGAAATCCCCGATTTCGATC
ACCCAGCGATGGTTGACCAAGCAATTCTTTGACGTCAAATGACCGTGCGA
TTTAATGGGGCTGTCGTGAATGGCAAGCATCCCTGTTGCAATATCATTTA
TGAACGTATGTTTGAAATCCCAGTCCAGCTGCACGTCTTCTTTGCTAAGA
ATATCATAAAGGCTTCCTTTGGCACAGAAATCATGTAGGAAACAGATGTT
AGGTTGCATGTTCGTCACACCACGAAATTTGTTGATGTTCGGTGCATTCA
AATCGCGCAGATGTTTCAGCTCCATCAAAATATTTCGATCCATGAACAAG
CCTGTTTTGGGTAATTTCTTCAACATTAGCCTATTACCGTTGTAAAAGAC
ATCTAACCTGTAAACATTGGTGATCGGATTCATCTCGcctttcttttcaa
taatatcGACCAGCGTGGCATGCGGGAGAACAATGTTCGTCGTCAGGTCT
TTGAAGCGCACGATCGAATCCTTGCTGTGGAtgtcattttcatatttttg
catTTTGTACGCGCGGTAGGCCATGAAGCAAACGAAGAGAACGCCTACAA
TACAACCCATAATAATGGTCAAAGTCCAATCACTCCCTTCGCATATTTCA
GTGAAGCCACACTTTGGAATATCCTTTGGCTCCTTCAGATATCCACCATA
CCAAATCATCCCAACCGCTGTCGTCGATTCTTCATTGAATTCGATAGACG
TTGTCGTTACGTTCCCCACAATATTTTCCATGATGAATTCAGATGTACGG
AATCCCCAAGTATCGAAATCGATCTTCCCTGAGAGACCTAAGGCGAGAAA
TTCATTAAAAGAATGATGGGAGTATAGTTTGCAAAAACAAGCACTAAACA
ATCCTTCAGGATAAGACTTTTATGAAAGAGAAGTTTTTTGGTACCTGTaa
agtttgatattttcatttctttgataATCTGGCTGGTGTTTTTCAATAGC
TCTTCATAACTGATGTTTGACAGAACTCCTATAATATCAATGTCCGGTAA
TGTGTTATTATTCAAATACCATTCTGGTGTGTCCGGAGTTTCAGTCTCAT
TGATGAATGGTGTCCAAGTTTCGTTGAATCTCCATTGGTGTTGTAACCAG
CGCATGTATTTTGGTGTTGTGGTCTGTGTAGTGGTTGTAGGAGTCGAATT
TGTCGGCAAAGTTGAATTCGTGACAGCTGTTGGTGAAGTGCGTCCTGTTG
TAATGTTGCTTGTTGTAGTGTTGTTTAGTGGTGCTGTTAAGTTTCCATTA
GTTGTTATGTTGAGTAGTGAGCTGTTTCCATTTGATGGCAAAGGAGTAGT
CGAAGTAGTGCCTGGACTCTCTGTTTCGTGTAGGTGTACGCTTTCTTCCT
CGTCAAATCTACTCACATTCCATTCTATGAACTCTTGGTATTCCTCTAGC
GTGATATTATTGAGGTCGAAGAATTCTTCGAATTTGTTCTCCCTTAAATA
GTGTTGGATggctatttcttttttttgttctaTCAAAGAATCCAAAGCAT
TCTTATAAATCCAAAAACTGTCATACATGTAGGATGCATCAGAAAAATAA
TCATCCCATTTTGactgaaataaaacaaaatgaagttTTGAGAACCAACG
ATAATTCTTCATATTCAATCCATCCAATTAAACACGAAATATTATATTGT
TGCTGAACACAAAAACAAAGACCGAAAGCATTCAACGCTAACCTTTCATC
AGCTGGCGGTACACTTCAAAGGAGAACTTCGAATAGAGATAGGCATTGAA
GTGaaagttaaaggtttttttCTCTAATAGGAACCCCTTAAGTTCAAAAT
CTCatctaattcgaacaaattctTCGGTCCTGTCAGAAAATACCTTAAAA
CAAGAGTCTACTTACACTTTTTTTGGTTCCATAACTATCCTTGGCCCGCT
GGTTGATGTCGTGATATTTCTGTCTGTTCTTATAATCTTTGGATTCTTTA
GCTCGGATATTGAGCACTCCATCCATGGCACGTTTGACGTCCACTATCAA
CGGAGGTGGTTGAGAGATCTCTTCCAGGTGATAATCCAAAGTGAAGATGG
CCCACTGGGCTTCGTCCATTTCCGATGACCCTTTGTCACTTGAATGAGTG
ATTTGTTTTTGAAAGTAATCCAAGATTCTGATCAACTCTCTCGATGAACA
CAGAAATAACAACACTAGAGAAAgcaggaaaattttaacttaaCTCACAA
GATTACAGAAGCCGTAAAGTAGGTTTTTAAAATAACGATTTATAGTTTTT
AACCGCCATTTAAACCCCTGTAGACCTAGAGTTGTTTTCAAAAGAGTAAA
ATAATGCCTTTTTAACTGTACAAAAACTAACTTTTCAACTCCAAGCCAAT
TGGAAGGAGCTACGAATGGTGCTCTGAATCTAGAGACCTAGTAAGTGTGA
AGTGAAGAAAACCAAATCATGTGATATTATAGAAACACTTCATTACCTCT
GGCATTTTCTTTGACATCATCGAACAGACTTGCATAGTTGATACCATAAG
TCTCAATGGAGAATGAGGAGACAGAAATCCCACTTTGGGTTAGACCCGTT
GCAGTCGTGTTATGAGCCACCCTGTTCTCTCTGGAGTATAGAATGCCAAG
ATATTTCCATGTGTACACATCCATGATGGCTTTGAAAACTTTCACCACAT
CTTGTGGATGTTTCTTTGTTTCTGGGAACACGCTCAAGTAATGTTCAATC
CCCAAGAAAGACGCATCGTCGCAATGGTAAGTAATGGTCGCGCGACCGTG
ATAATCGGCCGCCTCCATCACACGACGACACGGGTCGGATGAACAGTGAG
GCCCAAATATCATATCAACTTCATCAACATATATCATGCGCGATGTCTCT
TCGGATAGCTCAGTTTCTCGGCATGTTGTTTTTCGTTGAATCAACTCCAC
ACTGTAGTTTTGGGCGTTTGAAAACAATACGCTTCCTTGCTGGACGAACC
TTTGATAaataaattcttcctcgttgcTTCCCTTTGGCATTAACGCACCG
ATCTTTAATTTCACTTTTCTATCTTCTATCTCTTTCAATCTCATTTTCAA
ACTGTAAGGTGTTTCATGGTCTGTCAGTATACAACCAAGAAGTGAGTGTA
AAAATAGTATCTGAAACATTTTTACTTTAAACATTTTTGCTagacttttt
ttgtattttcattcgacttcaaaaatgtttatgtttGCAGAACCTCATTT
CTAAATCCtaggaaagttttcattttctaccCCTTCTTTCCTACTTCTCT
CTgaaaaaaatggcaattttcacctattttttttgtctgtttagTTGCCA
TGAAAATATCCAAATATAACGAAAAATTCGCTTGTTcgattgataaattt
ttaagaatttatgaATCAGATACTTTTGGCGTCTGTCAAATTGTTTTTGC
TTTTCGCTTCATAGTTGATCAATATACCTCCTGTAAACTTGTTTAAAACC
TCTTTTTCACCCTTCATTTTCTATTCATAGCTATCGCAATCAAAGTTCAA
AGGACTGGGCGCGAATAGTGAAGATCAGAATGCTGTGATTGGTTAGTTTA
TTGCCATGCTGTCTGGAAAATCGTAATTTGATAATGATGAGTGCTTAAAA
ATGCAGCCCGAAATTCGGCAATTTTTAGGTCCTAGCTGACGGGCTAttct
tttaacaaataaaaacatcccTTGAGAATCTTAAAGTTTTTCTCTTACAC
TCTTTTTTAGAAGAGCAATTTTATAAGTACAATTAGTttagaaaatgcca
aaaaaaatcaGAGCAATTATGAACCTGACATGTCAGAATTTCAGGCAACT
TGAGGCTCAAAGTAGCAAAAACTNCACCGATCTTTAATTTCACTTTTCTA
TCTTCCATCTCTTTCAATCTCATTTTCAAACTGTAAGGTGTTTCATGGTC
TGTCAGTATACAACCAAGAAGTGAGTGGAAAAATAGTATCTGAAACATTT
TTACTTTAAACATTTTTGCTagactttttttgtattttcattcgacttca
aaaatgtttatgtttGCAGAACCTCATTTCTAAATCCtaggaaagttttc
attttctaccCCTTCTTTCCTACTTCTCTCTgaaaaaaatggcaattttc
acctattttttttgtctgtttagTTGCCATGAAAATATCCAAATATAACG
AAAAATTCGCTTGTTcgattgataaatttttaagaatttatgaATCAGAT
ACTTTTGGCGTCTGTCAAATTGTTTTTGCTTTTCGCTTCATAGTTGATCA
ATATACCTCCTGTAAACTTGTTTAAAACCTCTTTTTCACCCTTCATTTTC
TATTCATAGCTATCGCAATCAAAGTTCAAAGGACTGGGCGCGAATAGTGA
AGATCAGAATGCTGTGATTGGTTAGTTTATTGCCATGCTGTCTGGAAAAT
CGTAATTTGATAATGATGAGTGCTTAAAAATGCAGCCCGAAATTCGGCAA
TTTTTAGGTCCTAGCTGACGGGCTAttcttttaacaaataaaaacatccc
TTGAGAATCTTAAAGTTTTTCTCTTACACTCTTTTTTAGAAGAGCAATTT
TATAAGTACAATTAGTttagaaaatgccaaaaaaaatcaGAGCAATTATG
AACCTGACATGTCAGAATTTCAGGCAACTTGAGGCTCAAAGTAGCAAAAA
CTGGGCACAAACCCTAAAATTTAATACCTCAATATCACCCTAAAAATGAG
AGCAGGATAAGAACTATTTGAGGCCAAATTGCTACCTAGTTATTAATGCT
TGTTAACCCTATtggccccaagcttttttgactttggtatccccaggggg
gggtagaatctaccaccctcgattatttttgacctagaagagctatggtc
atgaaatttggtacagatgttcttcatcattaaacaaatttccaggaaga
aaaaaaaaattgattacgtcattcaaaaaccgatgacgtcatcacaaaat
ttccacctgtcggaaaaaagcccaaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttagctgggttt
tatgtcatgtttcacaataaagtcataaaacctgatttgaacaacctatg
accctaaaattttgcacaagtactcttaattagattttgtcaaaagtcaa
aaagtttcaagtcgtttgaaaaatttttctcagagatattcacaaaagaa
ctccagcgtggtagattctaccccccccctggggctaatagggttaatcA
TCGTTCCTTTTGCAGACACCCTGCGAAAAGAgatgaaaaatctgaaagaG
AAGTTACGGTCTGCAGTGGAGCGCATCAAATCGTTGGGTATTGAACGACA
GAAATTGATCGATGTCGGTAATCGATTGCGTGCACAAATCCAACAAGGTT
AGAAATTCGTAATGTGTTGACGTTAAATGTTTGAATAAAGCTTTCTGAAT
GCCGAATCGAAAGCTCTCTATATATCTCTTATGTCGGATAGTTGAGTCTC
TATAACTTATCAAGGGGAATGTAAATTTGGTCGAGCTGTGTGTGGAGGAT
TCCAATAGTAAAGAGGTTAGGCTAAAAAGACTTGTTCATTAGGATTTATT
AACTGAAGTGACCAAATAAGGAGTTTTCACTATTTTTCTATGTCTGATAA
TTCTTGCTCCTTTCTCTTCTGCATTGACCAGCAAAGACCACTCATCAAGA
AGAGGAAGTTCCCGCAAACAACAAACTGGCCACACACGAAAACAACGAAT
ACACATCCACCCTACAGCAACTTCGTCATCAAGGTGTAACCAGGGAGAAT
GTACACGTGCATATTAACAACCAATCAGCTTTGAGCTCACTCGACGGAAC
TAGAACACCCCGTGAGTTATACGAAATTTCATGTGTTATTTTTCTAAGCT
CGTgtatacaaaaaaatacaatttaatACCAGCCAAGAACAACTAAGATT
ATACTTTTGTTTTCCGTTTTTAGCTGTAAGAGATACTGACAGAGGAATGA
CGTCACCTCCTTTGAACATTACATCATCAGAGAACTCGTCCCTCAGAGAG
GTCTGGAAACTACTGGAAGAAGGTTCCCATATTTCCATACCAAGCTCTAT
AGAAGTGGAAAAGGATGACCTTATGATTGCAGGCAAACCTTTAGAGAGAC
AACAAAAATCGACTCTATCAGTACGAAATGTCGCAATCAAATTACCTGCg
tcaaagaaaaaacaacaaagaaacaTACGCAATTATAACGAGCGTAGTTG
AAACATCTCAATTTCACATCATAATTGTTGAAGGGAATTCAATATGCAAA
CTATTATAANTGGAAACTACTGGAAGAAGGTTCCCATATTTCCATACCAA
GCTCTATAGAAGTGGAAAAGGATGAGCTAATGATTGCAGGTAAACCTTTA
GAGAGACAACAAAAATCGACTCTATCAGTACGAAATGTCGCAATCAAATT
ACCTGCgtcaaagaaaaaacaacaaagaaacaTACGCAATTATAACGAGC
GTAGTTGAAACATCTCAATTTCACATCATAATTGTTGAAGGGAATTCAAT
ATGCAAACTATTATAACTTTGTATGGAATCCGTCTGGACAGATTCGCATG
CTATTGATTGCAAGCATGGCTGCTTCTCAGACCTTCGACACTGAGGATAA
ACCACTAAAAAGAGGCGACACTCCGTCTTTTTCTTTGAGACAAAGACCTC
AGAAGAAAATCCTTTCTATGGAGGAAGAGTTTGAACAAATACGGAAATGT
CGATACATCCGAAAAACACCATTACAGCGAGTTGATTCTGAAAATATCGA
CCTTGATATTTCGTTCCTCAGTGCGAAAACTATTGATCAGAATGCTAATC
TATCGGCTAAAACTGGTTTATCGAGTATATCGGAGAGTGTCGATGAAGAT
GAAGAATCAAAAGCAATCGAACATAAAACTCAAGAGACTCCACAAATTAC
AAAGGCGAATACAGGTCGAATTGTGGTCAGACCTCGATCGCCTATTCAAC
CATTTATTGTACACGATACACAGTTGAAAAGAGATAAACTGGAACCGACG
CTCATAACTGAATTTAATAACAAGTGTTCTGTTGAAACTAAGAAGAAATC
CAAGAGTATTCTCAAGCGAGCGACTAAACCTGTTGGTAAACTTGACTTGT
TGTATAAAGAGGTTTCCCGTGCGGCACGTCAGGCGGACGTCGATCTAAAC
GCGGCCGTTCAAAGCATACGAGACGATCAAGAACAAGATAAAAGGTTTGA
GAGACTTCAAAGGTCTGATCAGAGTGTGAGAAGATGGAATTATATCGGCC
GTCTTGTTCGTTCTGGTTGGTTGTTCGGAAGAAGAGGTAGATCACTCAAA
CTGTTTGAAGATCGAAAACGAAAGCGTAGGATGAATGCAATGAATTTGGA
GCACCTCCCGATATCTTACAAAGCGTCTGTTGGCACGCTACGTGAACAAC
AATCCTCNCTTTGTATGGAATCCGTCTGGACAGATTCGCATGCTATTGAT
TGCAAGCATGGCTGCTTCTCAGACCTTCGACACTGAGGATAAACCACTAA
AAAGAGGCGACACTCCGTCTTTTTCTTTGAGACAAAGACCTCAGAAGAAA
ATCCTTTCTATGGAGGAAGAGTTTGAACAAATACGGAAATGTCGATACAT
CCGAAAAACACCATTACAGCGAGTTGATTCTGAAAATATCGACCTTGATA
TTTCGTTCCTCAGTGCGAAAACTATTGATCAGAATGCTAATCTATCGGCT
AAAACTGGTTTATCGAGTATATCGGAGAGTGTCGATGAAGATGAAGAATC
AAAAGCAATCGAACATAAAACTCAAGAGACTCCACAAATTACAAAGGCGA
ATACAGGTCGAATTGTGGTCAGACCTCGATCGCCTATTCAACCATTTATT
GTACACGATACACAGTTGAAAAGAGATAAACTGGAACCGACGCTCATAAC
TGAATTTAATAACAAGTGTTCTGTTGAAACTAAGAAGAAATCCAAGAGTA
TTCTCAAGCGAGCGACTAAACCTGTTGGTAAACTTGACTTGTTGTATAAA
GAGGTTTCCCGTGCGGCACGTCAGGCGGACGTCGATCTAAACGCGGCCGT
TCAAAGCATACGAGACGATCAAGAACAAGATAAAAGGTTTGAGAGACTTC
AAAGGTCTGATCAGAGTGTGAGAAGATGGAATTATATCGGCCGTCTTGTT
CGTTCTGGTTGGTTGTTCGGAAGAAGAGGTAGATCACTCAAACTGTTTGA
AGATCGAAAACGAAAGCGTAGGATGAATGCAATGAATTTGGAGCACCTCC
CGATATCTTACAAAGCGTCTGTTGGCACGCTACGTGAACAACAATCCTCA
CAAATCACCACCATACAACAACGATTGACCAACAGTCGATCCTTGCCACC
TGTACAACACAACCGTTCGAAATCCGTCAAAGGGAACTCTTCGCCACGAA
CTTTACCTTCTCTCAGTAAACAAATGCACAGAAATGTTGACAGGAGTCGA
TCGCTCCCGGCTATTCATAAACCAAActttttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013018XLOC_013018Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023158-exon-sc0000444-1491911889:137548..137674TCONS_00023158-exon-sc0000444-1491911889:137548..137674Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1510915933:137548..137674TCONS_00023158-exon-sc0000444-1510915933:137548..137674Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1575043694:137548..137674TCONS_00023158-exon-sc0000444-1575043694:137548..137674Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1491911889:138030..138215TCONS_00023158-exon-sc0000444-1491911889:138030..138215Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1510915933:138030..138215TCONS_00023158-exon-sc0000444-1510915933:138030..138215Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1575043694:138030..138215TCONS_00023158-exon-sc0000444-1575043694:138030..138215Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1491911889:138400..138701TCONS_00023158-exon-sc0000444-1491911889:138400..138701Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1510915933:138400..138701TCONS_00023158-exon-sc0000444-1510915933:138400..138701Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1575043694:138400..138701TCONS_00023158-exon-sc0000444-1575043694:138400..138701Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1491911889:145257..145317TCONS_00023158-exon-sc0000444-1491911889:145257..145317Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1510915933:145257..145317TCONS_00023158-exon-sc0000444-1510915933:145257..145317Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1575043694:145257..145317TCONS_00023158-exon-sc0000444-1575043694:145257..145317Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1491911889:148513..148644TCONS_00023158-exon-sc0000444-1491911889:148513..148644Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1510915933:148513..148644TCONS_00023158-exon-sc0000444-1510915933:148513..148644Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1575043694:148513..148644TCONS_00023158-exon-sc0000444-1575043694:148513..148644Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1491911889:148929..149108TCONS_00023158-exon-sc0000444-1491911889:148929..149108Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1510915933:148929..149108TCONS_00023158-exon-sc0000444-1510915933:148929..149108Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1575043694:148929..149108TCONS_00023158-exon-sc0000444-1575043694:148929..149108Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1491911889:149221..151781TCONS_00023158-exon-sc0000444-1491911889:149221..151781Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1510915933:149221..151781TCONS_00023158-exon-sc0000444-1510915933:149221..151781Clytia hemisphaericaexon
TCONS_00023158-exon-sc0000444-1575043694:149221..151781TCONS_00023158-exon-sc0000444-1575043694:149221..151781Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000444supercontigsc0000444:137548..151781 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.75287	2.35805	2.41644	2.21766	6.48455	5.13829	4.57799	4.93939	14.0018	20.8974	5.58855	36.3216	0.78187	0.710302	0.750959	0.875718	1.59802	1.36863	0.61382	0.607785	0.743736	0.859702	1.28957	1.19388	1.82618	1.98167	0.342277	0.190806	0.930341	0.797722
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023158 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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