TCONS_00023072 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023072
Unique NameTCONS_00023072
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023072 ID=TCONS_00023072|Name=TCONS_00023072|organism=Clytia hemisphaerica|type=transcript|length=142bp
atcaaaaatatgttccgttcgcgtcaGCCGACTGACCAACTTGGCAGACA
AAAATTCCTAGTCAGACGAGTCAGAAAATTGTCGGAATTTTTCATCAAGC
AAacgaataaatattaaaaactatatatactttgaaaccatt
Run BLAST on NCBI

transcript from alignment at sc0000439:63051..63192

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023072 ID=TCONS_00023072|Name=TCONS_00023072|organism=Clytia hemisphaerica|type=transcript|length=142bp|location=Sequence derived from alignment at sc0000439:63051..63192 (Clytia hemisphaerica)
aatggtttcaaagtatatatagtttttaatatttattcgtTTGCTTGATG
AAAAATTCCGACAATTTTCTGACTCGTCTGACTAGGAATTTTTGTCTGCC
AAGTTGGTCAGTCGGCtgacgcgaacggaacatatttttgat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012959XLOC_012959Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023072-exon-sc0000439-1491911889:63051..63192TCONS_00023072-exon-sc0000439-1491911889:63051..63192Clytia hemisphaericaexon
TCONS_00023072-exon-sc0000439-1510915933:63051..63192TCONS_00023072-exon-sc0000439-1510915933:63051..63192Clytia hemisphaericaexon
TCONS_00023072-exon-sc0000439-1575043694:63051..63192TCONS_00023072-exon-sc0000439-1575043694:63051..63192Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000439supercontigsc0000439:63051..63192 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023072 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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