TCONS_00023060 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00023060
Unique Name	TCONS_00023060
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1800

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000439:86708..97045-

transcript sequence

>TCONS_00023060 ID=TCONS_00023060|Name=TCONS_00023060|organism=Clytia hemisphaerica|type=transcript|length=1800bp
NAATATGGAATACACAGAATATTTACCAGTCCCTTGAAAAAGGTGTTGGT
TCTTTCAGCTTTTCTCGCTTTATCAATTTATCTCCAAAAGAACTTGTATT
ATTGTTTCGTTCACAAATTTTTCGGTTAATCCACAGTTTTCTGGTACTTT
CTCACTTACAACACACGCACACATTGCAACCATTCATAACGAGAGCAGAG
GATGATGGATCAAATTTCCACAATGAACCCTCACAAAAGAAATATTTAAC
GAGGAAAGACTTACTGATATGTAGTCCACGACACCATAGCATGTTCAATT
CTTCTCAACGTGACTTTGTTTTTGTTCGATCTACATCCACTTGCTCTGGT
TTCAACTCTTGTAAAATCATTGAAGTAGTCAAGGAAAATAGTTTACCAAA
GTGCCCTGAAGAACGACATTGTGTTGCTGTCGACTATCCAATGTTTCTTT
CGTCCTACATGCCAAAGgtATACTCTCCACCTATCGAAGTGTATTGCAGC
GATCGCAGTGCAGCGTATCAGTATAAACGCCGGGCTTTTGGAACTGATGA
TCTATTGGAGTTTTACATGCATGGCCCTTGCTCACAACCTACCAATCGAC
AGCTATTGTTTTATCCACCACCACGACAAGGCTTGCAAGCATTGCAGCCT
GTCAATGGATGGTCCAGGGTTCGAGTTCCTAATCGGACAGCCTTGTTATC
AGACAGTGGTAAGTTACTGGTGCTCGATCAGCTATTAACCAGAATGAAAC
GAGAAGGACATAGAGTGCTCATCTATTCCCAAATGACCAAAATGATCGAC
ATTCTGGAGGAGTTCATGAACTATCGGCAACATTCTTATATAAGATTGGA
TGGCTCCTCCAAGATTTCCGATCGGCGTGATATGGTCAATGATTTCCAAA
GCAGGGATGACATCTTCGCATTTCTATTAAGTACGCGTGCAGGAGGTCTG
GGCATTAATCTCACGGCGGCTGACACCGTCATATTTTACGACAGCGATTG
GAATCCGACTGTGGATCAACAGGCTATGGATCGTGCGCACAGGCTGGGTC
AAAAGAGACAAGTGACAGTTTACAGGCTTGTTACTAAGGGAACGGTGGAG
GAGAAGATCTTGAACAGAGCTCGTGAAAAGAGCGAGATTCAAAACATTGT
GATATCAGGCGGCCAAATGAAAACAGACGTGTTACGACCGAAAGAAGTAG
TTTCCTTGTTATTGGACGATGTCGAATTGGAAGCCAAGTTGAAACAAAAG
CAAGCAGAAAAGAAGTTGGCAGAAATGTCTGGTAAACGACCAGGTCGGAA
AAGAAAGAACCCTGTCGAACAGAATAATGGAGAGCCATCGAAGCTACAAA
GAACAGTGAGCGACGGGCCGGCAGACGTTTTGAAGAATGCAGATCATTTG
CTACAACGCACTGATTCTTTCGAATCCATTGATGAAAACAGCATGTCCAG
TATTGATTTCTCCGGTGTCAACCAATCAGAAGTTGCGACTGACGGTTCAT
CTCGTCCTCCATCAGCTACTGGCAGCCCCGGTCAAAGTCCATCGACTTCT
GGTACGAAGAGAGGTCGTGGTCGCGGGCGGGGAAGAGGAGGAAAAGCAAA
GTCTGGCTCCTTAGCTAAGGCGGCTGCCTCGGTTGCTGCAGCAGCAGGTG
CAATGGCAGGGCGGGATGCAGCTTACGCCCAATATGGATATTCATTTCAA
AAGAACTCGTAGCGTTTACTGTTTTATTTTCGACTGTCCATTTTTAGTGT
TTATTTTTTACCAAATCGATAGagaaattttatatttattcGTATGATAG

Run BLAST on NCBI

transcript from alignment at sc0000439:86708..97045-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00023060 ID=TCONS_00023060|Name=TCONS_00023060|organism=Clytia hemisphaerica|type=transcript|length=10338bp|location=Sequence derived from alignment at sc0000439:86708..97045- (Clytia hemisphaerica)
NAATATGGAATACACAGAATATTTACCAGTCCCTTGAAAAAGGTTGGTTT
GTTTTATACAGTGGAGTCTCTTTAACTTGAACCTCTATAACTCGAATATC
TCCCTAACTCGAACAAGCTTTCTCCTCCCTTCAGTTAACAATACGGAGTT
TATGTATGTGTGTTTTTCAGCGACGGAGACGGTAAGGTTCTAATTTGACT
AGATCATGACCAACTGAGGACGACGGTAAATCAGCAATTTTACCGTCCTC
GATTTTGCGGGTCAGAACTGCGGGTTTTTCCAAATTGCTTCAGTCAATTT
ACCGTCCTCAAAAGTGCAAATACATAAACTCACTAATTTCTTATAAACCT
TACTCCAAAATTGAAATTTCCTTAACAAATTTGTGTTCCCCGTGTTATGG
CCACATTAATTAACTATACTTAAACATTTTGAATAAATGTATCCAAAGTA
GCGACCGTAGTACAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTGTG
GGTTCAACCCCCAGCCGGGTCATACCAAAGATTCCCAAAATGGCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCAGGGAGAAAGAGTGGCGCCCTCCC
CTACCTTCGGGTAGATAGCTATCGAAAGAGGAGCCTTCGGGTCGCCTCCG
ACTGCGGTCGCAGACTTACTATCCAAAGTTACCTTACTGGATCGAACGGT
TTGCCCGGTTCCTCGGTCATTCCGGCCATCGCTGTCCATCAAAGATGTCA
TAAGTTCTATTTGGACCAAATATAAAACCTACAATCGTGGTAATTTTTGG
TGAATTAACACATGCTAAAACTTTTGTCATGGTGTTCGCCACTCTAGATT
GACGTGAATGATCTGTTTTTTTCTGTTACTGTCTGAACGGCTTAATTTTG
ATTATTACTTGTTTTTTTCGTTAGGTGTTGGTTCTTTCAGCTTTTCTCGC
TTTATCAATTTATCTCCAAAAGAACTTGTATTATTGTTTCGTTCACAAAT
TTTTCGGTGAGTATGTTTAAACATTATAATGATAATTATAAGTGAGAGTC
GTGAATTTCTTCTAGAGTTTTCGGTGGTAAATTCAATAAGCAGTCGGTGT
TGCTTTAGCAACCTTTTATGCTATTAAGTTGAGAAAAAATAATCTCTTGA
TATTCTGACATTGGACATCTAGGAAAAATCTGTTCATAGGGAGGAGGTTG
GACAGCTTAACTCATCATCATTCACTAAAATTTACCCATTGACAGGGCAA
ATCTACCCTTTGGACAGGGCAGGTTTTCTCAATTTTTATACTCCTCCTGG
ACGGTGTATCTTCAACCGTTTGTACGGTTGTTTTCTGGAAGAACCCATTG
ATATATTGTTTATTCAAACACGCATCATCAATGACTAATGAAATTAAGAG
AGTCTTTTCGCCCATTCTTAAGAAATACGATTTATGATTCTTCAGGTTAA
TCCACAGTTTTCTGGTACTTTCTCACTTACAACACACGCACACATTGCAA
CCATTCATAACGAGAGCAGAGGATGATGGATCAAATTTCCACAATGAACC
CTCACAAAAGTAAGTGCTTCTACTCTAACATAGCCTGGAGATCTGTTCTA
TGATTTCTTAGCATGGTTTGGCTTTTGAGTTTGAATTTTCCATCTACAAA
CTACAGTTGAAAAGACAGCCAATGAAATTTAGTTATTTTCACTGGTCACA
CTTTGTCAGAAAAAAAACACAGGTTTTAAAAATAGCAATTTCTTCTAGAG
TTTTCGGTGGTAAATTCAATAAGCAGTCGGTGTTGCTTTAGCAACCTTTT
ATGCCATTAAGTTGAGAAAAAATAATCTCTTGATATTCTGACATTGGACA
TCTAGGAAAAATCTGTTCATAGGGAGGAGGTTGGACAGCTTAACTCAACA
TCATTCACTAAAATTTACCCATTGACAGGGCAAATCTACCCTTTGGACAG
GGCAGGTTTTCTCAATTTTTATACTCCTCCTGGACGGTGTATCTTCAACC
GTTTGTACGGTTGTTTTCTGGAAGAACCCATTGATATATTGTTTATTCAA
ACACGCATCATCAATGACTAATGAAATTAAGAGAGTCTTTTCGCCCATTC
TTAAGAAATACGATTTATGATTCTTCAGGTTAATCCACAGTTTTCTGGTA
CTTTCTCACTTACAACACACGCACACATTGCAACCATTCATAACGAGAGC
AGAGGATGATGGATCAAATTTCCACAATGAACCCTCACAAAAGTAAGTGC
TTCTACTCTAACATAGCCTGGAGATCTGTTCTATGATTTCTTAGCATGGT
TTGGCTTTTGAGTTTGAATTTTCCATCTACAAACTACAGTTGAAAAGACA
GCCAATGAAATTTAGTTATTTTCACTGGTCACACTTTGTCAGAAAAAAAA
CACAGGTTTTAAAAATAGCAATTTCTTCTAGAGTTTTCGGTGGTAAATTC
AATAAGCAGTCGGTGTTGCTTTAGCAACCTTTTATGCCATTAAGTTGAGA
AAAAATAATCTCTTGATATTCTGACATTGGACATCTAGGAAAAATCTGTT
CATAGGGAGGAGGTTGGACAGCTTAACTCAACATCATTCACTAAAATTTA
CCCATTGACAGGGCAAATCTACCCTTTGGACAGGGCAGGTTTTCTCAATT
TTTATACTCCTCCTGGACGGTGTATCTTCAACCGTTTGTACGGTTGTTTT
CTGGAAGAACCCATTGATATATTGTTTATTCAAACACGCATCATCAATGA
CTAATGAAATTAAGAGAGTCTTTTCGCCCATTCTTAAGAAATACGATTTA
TGATTCTTCAGGTTAATCCACAGTTTTCTGGTACTTTCTCACTTACAACA
CACGCACACATTGCAACCATTCATAACGAGAGCAGAGGATGATGGATCAA
ATTTCCACAATGAACCCTCACAAAAGTAAGTGCTTCTACTCTAACATAGC
CTGGAGATCTGTTCTATGATTTCTTAGCATGGTTTGGCTTTTGAGTTTGA
ATTTTCCATCTACAAACTACAGTTGAAAAGACAGCCAATGAAATTTAGTT
ATTTTCACTGGTCACACTTTGTCAGAAAAAAAACACAGGTTTTAAAATTG
TTTTAATTTTCGTTAGTAAGAAAAGCACTAAATGCGAATTTCCTACTGCA
AATCTTTTGCGGTAAAAGTCGGCCTCACATGACCAGGTTATATAAAAACA
GGACGGGTCTCCTGTCTAGTTCTAACACAGTGTATTCTTTTTCTCTCTTT
CTCCCTGCTTTCACTTTTTCTAATGAAAGTTAACTTACTTGCTTTGGAAG
CGTGCACTGTAGAAGTTATTCTTAACTCTTGATTGACAGTCTTATTAAGT
CAGTCTAGCAGAAAAACAATTTATTCAGCCTCTGGATTATGGGAAACCTG
GAAGGAGACCAGCCTTTTCTAATGACTTTGATTTATTTCTCCAGGAAATA
TTTAACGAGGAAAGACTTACTGATATGTAGTCCACGACACCATAGCATGT
TCAATTCTTCTCAACGTGACTTTGTTTTTGTTCGATCTACATCCACTTGC
TCTGGTTTCAACTCTTGTAAAATCATTGAAGTAGTCAAGGAAAATAGGTA
TCTTTATTCATGTAGTTATTTTTTGGTTGTGTGTTTGAGCAATTTTTTAA
CCTGACTGACGGAAGACTCTGATCGTTCGAAACAATAAAACTTGATCTTT
TGAGTTAATTATGTCTTGTAAACGAGTTTTTGGACCTAACGAACTACTCG
TATTGTTTGTAAAAAATTGGAATAGATTTTGATTCCTATTTTTATTAACT
TCTCATTTGTTAATTTTCAGTTTACCAAAGTGCCCTGAAGAACGACATTG
TGTTGCTGTCGACTATCCAATGTTTCTTTCGTCCTACATGCCAAAGGTAG
TACAGTAAAGTTAACTTCTACTTTTATCGGGTTAATTTCCGCAAGATTTT
CTGGATTTTTTTTCGCGAAGCTGTTTTTTAAACATTTCGGGTGGATCAAA
TTTCACGACTCAGCCAAAAATAATTTGAATATGGCCCTGAAAATGCCAAT
TTTTTTCTCAAATAGCAATTTTAAAAGATATTTTTAGCCGAAAATCTGAT
CTTTAAAATTGCGCGTGGATTAATTTCACAAGTTTGATTATGATAAGGCC
GGCCTAAAAATTACATTGGTTTGCTGTCACGAGACCGAAACCTACTCAAA
ATATGTCTAGTGAAAATTATATATAATTAAGAATTTTCCACTTCAAAACC
TAGGGTTGGCGGAAAACTAACTTTTTTAATGCCAGGTTTTCGAATAAAAA
TGGCAATTAAAACTATTTGAATGAAATATTTTTCAGGTATACTCTCCACC
TATCGAAGTGTATTGCAGCGATCGCAGTGCAGCGTATCAGTATAAACGCC
GGGCTTTTGGAACTGATGATCTATTGGAGTTTTACATGCATGGCCCTTGC
TCACAACCTACCAATCGACAGCTATTGTTTTATCCACCACCACGACAAGG
CTTGCAAGCATTGCAGCCTGTCAATGGATGGTCCAGGGTTCGAGTTCCTA
GTGAGTTACATTTCTTCGTAGTACATTGTGTTTCTTTGTTGAAACATAAA
CACAGGGTACATTACGAACATATACTTCAAAATACTACTAAACATTAATA
TAGTCCCTCCCTCCGTTAGAAACTTAAGTTATATTGTCAGAGGTAGTACA
TTTTAGACTTGTGTTTCTTCAGAGAAAAAAAGTTTTTTTTTTAAGACATT
ACATATGGCGCGCCGAATTACTTTTTATTACCAACTTTTTTTTTTCGACA
CCAACTTTTTTTTTCGACACCAACTTTTTTTCCGACACCAACTTTTTTTC
CGATACCAACTTTTTTTCAGGACCCGGATACGAAACTTCTTTTTGGTTAT
TGTCTCGCCCACCCAACCTGATTAATATAATATGTTTCTGGGGCTTTAAC
AAATTGAGTGCCGTGTGAAACTTTTCCAGATGGAATTGAAAAAATAAAAA
GACTGACTTTAGGACGAAGTCTGGAAGTTTGTTTTGGTTGAACTTGAAGT
CATTCCTTATAGTCAAGTACTTTGTGTTTTACTTCAAATTTGGTTTGTGA
ACTTTCTGTTTTTTTTAACTTAACCCTGTTAAGTACTTTTTTTTGCACAA
GTTAGCTAGAACCATTAAGGGACAGAAGAACCTTTTCTATGAGTAGTTTT
TTTTAAACTTCTTCCTGAGACACGTGACATTACAATAGAATTTCAGCGCT
TGACCAATCAGAAGCTTTGCGGATTTTCGGAAACAATAGCAGATGTTCAT
TTTTTTTTGCTTCGAAGAGCTGAAAGCACTCCATCTAGCCCTACTTCAGG
CTTTACAGAAATCTGTGATATGTACATGTATTTACCGCTATATAAACGTA
AAGGCCTTTTTACACTTTGAGTAATCAACGTTAGCAGGTAATCGAGACAA
GAGTTAGTATCGGAAAATAAAAGTTGGTAGGAAGGGAAAAAAATGGTATC
AAAAAAAAAGTGTGATATCGAAGAAAAAAAAGTTGGTGTCGAAAAAAAAA
GGTTGGTGTCGAAAAAAAAAGTTGGTGTCGAAAAAAAAAAGTTGGTAATA
AAAAGTAATTCGGCGCGCCATAATTACATCTGAATGTAAACATTGTTTGG
AGAAATCCTTTTTGATTTTTCAAACGTGGTGTTCGATAAGTGCAAAACAT
GTTCAAAGAGTGCGCTTGGATATATTGTACTGGAATCGTCTGATGATTCA
CAGTCAACTCTTTTCAAGATAACAGTGTTGCAATTTTTCCGTCTGTAAAC
GGAGGTCCGTCTAGTTGAGACACAAATATGCTATTTCCGTCTTTCAAGAA
AGAGGGTTTCGCTTCAAATGAGAGTAATGAGAATCTAATCCTAAAGTTTC
CGTCCATATTCACAAAACCCAGTTGCAACACTGAAATTATGAAGTGATTT
TTCGTCGTAAAGACTTTGAAGTGCTGTACCATATATAAGAAATTTGGCGG
TTTATACCTTTAGCATCTAACGGTACTTGTGTCTCGATTCTGCGTCCAAT
ATACAATTTGGTGATTTGATATCTTTCTCTTTTTCCTACATCCGTAGATC
GGACAGCCTTGTTATCAGACAGTGGTAAGTTACTGGTGCTCGATCAGCTA
TTAACCAGAATGAAACGAGAAGGACATAGAGTGCTCATCTATTCCCAAAT
GACCAAAATGATCGACATTCTGGAGGTGAGTTCTGAATGATTATTTTATC
ATTGCATTATCAATATTTTTATGTTTTATTTAAGAATCAATAAAAAATGG
TTGAGAATAGAAAGCCAAGGATCTACCGTGTGATGTGAAACTTAAACATA
ACGAGTAAAGAACTATATTGGAAGGCTTAATACGATAATTTTGATTGTAT
TGTATTAATGTGTACTTACCATTTAATTTCTGGTGCAAATATATGGTGAA
AAAGTCATTTGTAATTAGGAGCTGGCACAGAGCGAGCACTTTGAGGCTCA
AAATTGAAAAGTTATGAGAATTGCGAGGAGACTCACTTCGATTTATGTAA
CTGTGTATCTAACTTTTCGAGTAGAAAAATACACACTAAAAATAAAATCA
AAATATATCATTTAACATTTGCTTTCGAATTTTAAGGAGTTCATGAACTA
TCGGCAACATTCTTATATAAGATTGGATGGCTCCTCCAAGATTTCCGATC
GGCGTGATATGGTCAATGATTTCCAAAGCAGGTATTGAAAGAATTTTCTT
TGTTTTATAAAGTTTTGTTTGAAGAGAGCAGTAACCTATTACAATTTTTA
AATTCTATATTTTTCGGTGATTGTTTTCAAAATTTGACCTTTTAAAAATG
GTTTCAAATTATAACATAGTACGATTATATTAGCGAGTTTATGTATTTAC
ACTTTCGAGGACGTTGGAGTGACCGACGCGATTTGGAGATTTGGAATAAC
CCACAGTTTTGACCCGTAAAAGCGAGGACGGTAATAGTGCTTGTTCACCG
TCGTTTTCAGTCAATCTAGAAAAATCAGAAAAACGTAGCAGAAAAACACA
TACATAAACTTCCCCATTCTTTTAAAAAGAATGATGATTTTGATTGATAT
AACTTCTGTTCTGCTTTGATGTATTTTCTCCATCGTGCTATCTTTCATAT
GGCTTCCGAAGCAACAATCTTTTCCAGGCTAAACATGGATCAAATATCGC
AAATTACCACAAACATGTTTTTATTGACCTTTGAAACTCTTACCAGCCGA
CTGGTTTAAAGTCTCCTTTATACAATCTTTATGAGGAAATCTCTACTTCT
GATATTTTTCAGGGATGACATCTTCGCATTTCTATTAAGTACGCGTGCAG
GAGGTCTGGGCATTAATCTCACGGCGGCTGACACCGTAAGTCACTTCAAA
TGATACCTGTGCTAAAATCTTTTTTGAGTATTTCTGTGTATTTTTGAAAC
TTGGAACTTACACTTATCCCTGAATTTATCATTCTAAATCATTCTCTCTT
CAACTTGAACATCTAAAACTCGAATGTCTCCTTAACTCAAAGAAGTTTTA
TGGTTCCTTCAGTTAGTAAAACCCTACTCCATAACTCCAAAAAATTGTGT
CCCCCGTGCGTGTTCGATTTATGGAGACACCACTGTATATTTAACCAATG
TAACAACTTGAGCCTCTCCACGGAGATTTCCTGGAATATTTACAATTTTA
GCACCAGAAGAATCCTTCTCTATATCCCTTATAAAAAAAGCTTTTTCAAC
TAACTCTTGCTCTACTTTGTACAGGTCATATTTTACGACAGCGATTGGAA
TCCGACTGTGGATCAACAGGTACATTTTCTCTTTTCTCCCTCTTTCAATT
TAAATCTCTGCCTATTCGATGTAAAGGGCGACAGTTTTTTTCTTAACCTT
TTTTGCCTGGAAAAAAGATTACGTCATAAAAAAGTTTCGTGCGAACAAAA
AAAAAGTTGAAGGAAGTTCAACTTTTTTCATCCGTTTTACGTCAATTTCG
ACCAATGGAATTGCTTCCTTTTTCAAACGACCAATGACCTTACAAAAACG
TCAAAAAGTTTTCGCTCGTGTCGCGCGAAAGTGGAGACCAGCCTTAAGAA
TTTCTATGGAAATATATTACCATTTTCACTTCTAATGCAACTGGGTGAAA
ATGTTAGGACGTTGGAAGGAACTTTGATTTAAAACCGAAACCCTTGTCGG
TGACGCCTTAGAACACTCGGCTATTACTCCTTAAAAATCATAAAATTTAG
CATACTTTGAAATATCTATCATATGTTTTTTAAGGCTATGGATCGTGCGC
ACAGGCTGGGTCAAAAGAGACAAGTGACAGTTTACAGGCTTGTTACTAAG
GGAACGGTGGAGGAGAAGATCTTGAACAGAGCTCGTGAAAAGAGCGAGGT
AAGAAAGATGGGATAATGTGGTGTACTTTATTTAGGTGCAAGCAAAAATA
ATTCAATAGCTTTTATGGTAAAAAATATCAATCCTTTCGATATAAAAGCT
ATGCCAACAATATGTTTACCGTCGTCCTCAGCTGATCAGGATCTAGGAAA
TCAGGAGCTAACCGTCTCTGTCGCAGAAAAAGCAAAATACACTCACTATC
GTTAATTAGACTTTAAATTTTTTGGTTCAATCCCGACAATGCTTAACATT
ATTGTTTTTAGATTCAAAACATTGTGATATCAGGCGGCCAAATGAAAACA
GACGTGTTACGACCGAAAGAAGTAGTTTCCTTGTTATTGGACGATGTCGA
ATTGGAAGCCAAGTGTAAGAAACTACCACCTTTGTATTTCTATAGGTTAA
GTAGTGTTCATGGGGAAAAGTGCGTTAAAAATATCCCTGGGGAATAGTAT
GTTACAATAACCGTGGGGAGTAGTGTGTTACAATAACCCTGATCTTTAGT
ATTACAGGTGCTTAGGACTTTTGGTACGCCACATCCCCCTGGAAACAATC
ATTATCAGCAGTACGCTGTTGCGCCACAACAAGGAGGGTCACTTAATTCC
ATATTCATTTCGTATCTCTCAAAGGAAATACCACCATTAATATTTTTCTT
TGTAGTGAAACAAAAGCAAGCAGAAAAGAAGTTGGCAGAAATGTCTGGTA
AACGACCAGGTCGGAAAAGAAAGAACCCTGTCGAACAGAATGTAAATCAT
CTCTTTCTTTTGTCTTTAAAATTTATTCACTTTATCAATGCTTTCAGATG
TAAACGTTCATAATCCGATGGCAGTCTTGGTTCACGCTGACAAGTAGTAT
AGTATTATACTCTGTTGGGTGTGTCCCAGGCCTAATTCGCACCCTCCCTC
TCAAAAATATTTCCAAATACTGCACTTTACTATCAAATTTTTAATCATCA
TGAATCAATTGGTGTTGTCCTATGAAAAATGTCACGGGACCACAGGCTTT
GTCCCCTTACCTGCCTTTTGTTGATCGTGTAGTGAATATCTCTGAATTAA
TTTTTCCTTGTTTGTAGTATTTTTACGGCTCAACAATAAGCTCTTCTAAC
TGAAGGTCTTTTTCTTGCCTTATCCCCTTCAGAATGGAGAGCCATCGAAG
CTACAAAGAACAGTGAGCGACGGGCCGGCAGACGTTTTGAAGAATGCAGA
TCATTTGCTACAACGCACTGATTCTTTCGAATCCATTGATGAAAACAGCA
TGTCCAGTATTGATTTCTCCGGTAAGTTTGAAAAGGAATCTGTTTGCTGA
TTTCTTTTCCTGGGGGCTTTCTCCCTGATTTATAATAAGCAGTTATTGGA
CAGCAAAGAAGCCAATCAAATGTCGCTATTTACGCGCGTCGGATAATAAA
CTAGAATAGACTATTAACAAAGAAATATATTCCATGCCAATATTTTTTGT
AGGTGTCAACCAATCAGAAGTTGCGACTGACGGTTCATCTCGTCCTCCAT
CAGCTACTGGCAGCCCCGGTCAAAGTCCATCGACTTCTGGTACGAAGAGA
GGTCGTGGTCGCGGGCGGGGAAGAGGAGGAAAAGCAAAGTCTGGCTCCTT
AGCTAAGGCGGCTGCCTCGGTTGCTGCAGCAGCAGGTGCAATGGCAGGGC
GGGATGCAGCTTACGCCCAATATGGATATTCATTTCAAAAGAACTCGTAG
CGTTTACTGTTTTATTTTCGACTGTCCATTTTTAGTGTTTATTTTTTACC
AAATCGATAGAGAAATTTTATATTTATTCGTATGATAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_012950	XLOC_012950	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000439	supercontig	sc0000439:86708..97045 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.4896	1.84473	0.481866	0.819742	4.73265	14.3119	1.86756	12.9293	0.990189	1.38883	2.00696	1.90185	2.0667	13.4809	1.6452	4.79036	2.23316	4.93062	1.62857	1.13712	1.47724	1.72765	6.88097	2.1169	3.92838	30.4891	0.528923	1.04093	1.98071	2.67007

Blast

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BLAST of TCONS_00023060 vs. Swiss-Prot (Human)
Match: INO80 (DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2)

HSP 1 Score: 361.303 bits (926), Expect = 1.971e-109
Identity = 196/391 (50.13%), Postives = 257/391 (65.73%), Query Frame = 3

Query:   54 FSFSRFINLSPKELV-LLFRSQIFRLIHSFLVLSHLQHTHTLQPFITRAEDDGSNFHNEPSQKKYLTRKDLLICSPRHHSMFNSSQ----RDFVFVRSTSTCSGFNSCKIIEVVKENSLPKCPEERHCVAVDYPMFLSSYMPKVYSPPIEVYCSDRSAAYQYKRRAF---GTDDLLEFYMHGP---CSQPTNRQLLFYPPPRQGLQALQPVNGWSRVRVPNRTALLSDSGKLLVLDQLLTRMKREGHRVLIYSQMTKMIDILEEFMNYRQHSYIRLDGSSKISDRRDMVNDFQSRDDIFAFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQKRQVTVYRLVTKGTVEEKILNRAREKSEIQNIVISGGQMKTDVLRPK 1193
            FSF RFI++SP E+  L+ +  + R +  FL L      H L+ +      +G       S ++YL  KD L+      S  N       +  VF       SG++     +VV +         R C+  + P FL    P+V + P++ YC+DRSA  +Y+RR     G+    +  ++G     +   NR+  F+P P  GL +++P NGWS +R+P + +L++DSGKL  LD LLTR+K +GHRVLIYSQMT+MID+LEE+M YR+H+Y+RLDGSSKIS+RRDMV DFQ+R+DIF FLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ +QVTVYRL+ KGT+EE+IL RA+EKSEIQ +VISGG  K D L+PK
Sbjct:  888 FSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSW---GAPEGE------SHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSD----QVVHQRR-SATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSA--EYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPK 1262

The following BLAST results are available for this feature:

BLAST of TCONS_00023060 vs. Swiss-Prot (Human)

BLAST of TCONS_00023060 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
INO80	1.971e-109	50.13	DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 S...	[more]

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TCONS_00023060 (transcript) - C. hemisphaerica