TCONS_00023059 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023059
Unique NameTCONS_00023059
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1798

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023059 ID=TCONS_00023059|Name=TCONS_00023059|organism=Clytia hemisphaerica|type=transcript|length=1798bp
ATATGGAATACACAGAATATTTACCAGTCCCTTGAAAAAGGTGTTGGTTC
TTTCAGCTTTTCTCGCTTTATCAATTTATCTCCAAAAGAACTTGTATTAT
TGTTTCGTTCACAAATTTTTCGGTTAATCCACAGTTTTCTGGTACTTTCT
CACTTACAACACACGCACACATTGCAACCATTCATAACGAGAGCAGAGGA
TGATGGATCAAATTTCCACAATGAACCCTCACAAAAGAAATATTTAACGA
GGAAAGACTTACTGATATGTAGTCCACGACACCATAGCATGTTCAATTCT
TCTCAACGTGACTTTGTTTTTGTTCGATCTACATCCACTTGCTCTGGTTT
CAACTCTTGTAAAATCATTGAAGTAGTCAAGGAAAATAGTTTACCAAAGT
GCCCTGAAGAACGACATTGTGTTGCTGTCGACTATCCAATGTTTCTTTCG
TCCTACATGCCAAAGgtATACTCTCCACCTATCGAAGTGTATTGCAGCGA
TCGCAGTGCAGCGTATCAGTATAAACGCCGGGCTTTTGGAACTGATGATC
TATTGGAGTTTTACATGCATGGCCCTTGCTCACAACCTACCAATCGACAG
CTATTGTTTTATCCACCACCACGACAAGGCTTGCAAGCATTGCAGCCTGT
CAATGGATGGTCCAGGGTTCGAGTTCCTAATCGGACAGCCTTGTTATCAG
ACAGTGGTAAGTTACTGGTGCTCGATCAGCTATTAACCAGAATGAAACGA
GAAGGACATAGAGTGCTCATCTATTCCCAAATGACCAAAATGATCGACAT
TCTGGAGGAGTTCATGAACTATCGGCAACATTCTTATATAAGATTGGATG
GCTCCTCCAAGATTTCCGATCGGCGTGATATGGTCAATGATTTCCAAAGC
AGGGATGACATCTTCGCATTTCTATTAAGTACGCGTGCAGGAGGTCTGGG
CATTAATCTCACGGCGGCTGACACCGTCATATTTTACGACAGCGATTGGA
ATCCGACTGTGGATCAACAGGCTATGGATCGTGCGCACAGGCTGGGTCAA
AAGAGACAAGTGACAGTTTACAGGCTTGTTACTAAGGGAACGGTGGAGGA
GAAGATCTTGAACAGAGCTCGTGAAAAGAGCGAGATTCAAAACATTGTGA
TATCAGGCGGCCAAATGAAAACAGACGTGTTACGACCGAAAGAAGTAGTT
TCCTTGTTATTGGACGATGTCGAATTGGAAGCCAAGTTGAAACAAAAGCA
AGCAGAAAAGAAGTTGGCAGAAATGTCTGGTAAACGACCAGGTCGGAAAA
GAAAGAACCCTGTCGAACAGAATAATGGAGAGCCATCGAAGCTACAAAGA
ACAGTGAGCGACGGGCCGGCAGACGTTTTGAAGAATGCAGATCATTTGCT
ACAACGCACTGATTCTTTCGAATCCATTGATGAAAACAGCATGTCCAGTA
TTGATTTCTCCGGTGTCAACCAATCAGAAGTTGCGACTGACGGTTCATCT
CGTCCTCCATCAGCTACTGGCAGCCCCGGTCAAAGTCCATCGACTTCTGG
TACGAAGAGAGGTCGTGGTCGCGGGCGGGGAAGAGGAGGAAAAGCAAAGT
CTGGCTCCTTAGCTAAGGCGGCTGCCTCGGTTGCTGCAGCAGCAGGTGCA
ATGGCAGGGCGGGATGCAGCTTACGCCCAATATGGATATTCATTTCAAAA
GAACTCGTAGCGTTTACTGTTTTATTTTCGACTGTCCATTTTTAGTGTTT
ATTTTTTACCAAATCGATAGagaaattttatatttattcGTATGATAG
Run BLAST on NCBI

transcript from alignment at sc0000439:86708..97043-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023059 ID=TCONS_00023059|Name=TCONS_00023059|organism=Clytia hemisphaerica|type=transcript|length=10336bp|location=Sequence derived from alignment at sc0000439:86708..97043- (Clytia hemisphaerica)
ATATGGAATACACAGAATATTTACCAGTCCCTTGAAAAAGGTTGGTTTGT
TTTATACAGTGGAGTCTCTTTAACTTGAACCTCTATAACTCGAATATCTC
CCTAACTCGAACAAGCTTTCTCCTCCCTTCAGTTAACAATACGGAGTTTA
TGTATGTGTGTTTTTCAGCGACGGAGACGGTAAGGTTCTAATTTGACTAG
ATCATGACCAACTGAGGACGACGGTAAATCAGCAATTTTACCGTCCTCGA
TTTTGCGGGTCAGAACTGCGGGTTTTTCCAAATTGCTTCAGTCAATTTAC
CGTCCTCAAAAGTGCAAATACATAAACTCACTAATTTCTTATAAACCTTA
CTCCAAAATTGAAATTTCCTTAACAAATTTGTGTTCCCCGTGTTATGGCC
ACATTAATTAACTATACTTAAACATTTTGAATAAATGTATCCAAAGTAGC
GACCGTAGTACAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTGTGGG
TTCAACCCCCAGCCGGGTCATACCAAAGATTCCCAAAATGGCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCAGGGAGAAAGAGTGGCGCCCTCCCCT
ACCTTCGGGTAGATAGCTATCGAAAGAGGAGCCTTCGGGTCGCCTCCGAC
TGCGGTCGCAGACTTACTATCCAAAGTTACCTTACTGGATCGAACGGTTT
GCCCGGTTCCTCGGTCATTCCGGCCATCGCTGTCCATCAAAGATGTCATA
AGTTCTATTTGGACCAAATATAAAACCTACAATCGTGGTAATTTTTGGTG
AATTAACACATGCTAAAACTTTTGTCATGGTGTTCGCCACTCTAGATTGA
CGTGAATGATCTGTTTTTTTCTGTTACTGTCTGAACGGCTTAATTTTGAT
TATTACTTGTTTTTTTCGTTAGGTGTTGGTTCTTTCAGCTTTTCTCGCTT
TATCAATTTATCTCCAAAAGAACTTGTATTATTGTTTCGTTCACAAATTT
TTCGGTGAGTATGTTTAAACATTATAATGATAATTATAAGTGAGAGTCGT
GAATTTCTTCTAGAGTTTTCGGTGGTAAATTCAATAAGCAGTCGGTGTTG
CTTTAGCAACCTTTTATGCTATTAAGTTGAGAAAAAATAATCTCTTGATA
TTCTGACATTGGACATCTAGGAAAAATCTGTTCATAGGGAGGAGGTTGGA
CAGCTTAACTCATCATCATTCACTAAAATTTACCCATTGACAGGGCAAAT
CTACCCTTTGGACAGGGCAGGTTTTCTCAATTTTTATACTCCTCCTGGAC
GGTGTATCTTCAACCGTTTGTACGGTTGTTTTCTGGAAGAACCCATTGAT
ATATTGTTTATTCAAACACGCATCATCAATGACTAATGAAATTAAGAGAG
TCTTTTCGCCCATTCTTAAGAAATACGATTTATGATTCTTCAGGTTAATC
CACAGTTTTCTGGTACTTTCTCACTTACAACACACGCACACATTGCAACC
ATTCATAACGAGAGCAGAGGATGATGGATCAAATTTCCACAATGAACCCT
CACAAAAGTAAGTGCTTCTACTCTAACATAGCCTGGAGATCTGTTCTATG
ATTTCTTAGCATGGTTTGGCTTTTGAGTTTGAATTTTCCATCTACAAACT
ACAGTTGAAAAGACAGCCAATGAAATTTAGTTATTTTCACTGGTCACACT
TTGTCAGAAAAAAAACACAGGTTTTAAAAATAGCAATTTCTTCTAGAGTT
TTCGGTGGTAAATTCAATAAGCAGTCGGTGTTGCTTTAGCAACCTTTTAT
GCCATTAAGTTGAGAAAAAATAATCTCTTGATATTCTGACATTGGACATC
TAGGAAAAATCTGTTCATAGGGAGGAGGTTGGACAGCTTAACTCAACATC
ATTCACTAAAATTTACCCATTGACAGGGCAAATCTACCCTTTGGACAGGG
CAGGTTTTCTCAATTTTTATACTCCTCCTGGACGGTGTATCTTCAACCGT
TTGTACGGTTGTTTTCTGGAAGAACCCATTGATATATTGTTTATTCAAAC
ACGCATCATCAATGACTAATGAAATTAAGAGAGTCTTTTCGCCCATTCTT
AAGAAATACGATTTATGATTCTTCAGGTTAATCCACAGTTTTCTGGTACT
TTCTCACTTACAACACACGCACACATTGCAACCATTCATAACGAGAGCAG
AGGATGATGGATCAAATTTCCACAATGAACCCTCACAAAAGTAAGTGCTT
CTACTCTAACATAGCCTGGAGATCTGTTCTATGATTTCTTAGCATGGTTT
GGCTTTTGAGTTTGAATTTTCCATCTACAAACTACAGTTGAAAAGACAGC
CAATGAAATTTAGTTATTTTCACTGGTCACACTTTGTCAGAAAAAAAACA
CAGGTTTTAAAAATAGCAATTTCTTCTAGAGTTTTCGGTGGTAAATTCAA
TAAGCAGTCGGTGTTGCTTTAGCAACCTTTTATGCCATTAAGTTGAGAAA
AAATAATCTCTTGATATTCTGACATTGGACATCTAGGAAAAATCTGTTCA
TAGGGAGGAGGTTGGACAGCTTAACTCAACATCATTCACTAAAATTTACC
CATTGACAGGGCAAATCTACCCTTTGGACAGGGCAGGTTTTCTCAATTTT
TATACTCCTCCTGGACGGTGTATCTTCAACCGTTTGTACGGTTGTTTTCT
GGAAGAACCCATTGATATATTGTTTATTCAAACACGCATCATCAATGACT
AATGAAATTAAGAGAGTCTTTTCGCCCATTCTTAAGAAATACGATTTATG
ATTCTTCAGGTTAATCCACAGTTTTCTGGTACTTTCTCACTTACAACACA
CGCACACATTGCAACCATTCATAACGAGAGCAGAGGATGATGGATCAAAT
TTCCACAATGAACCCTCACAAAAGTAAGTGCTTCTACTCTAACATAGCCT
GGAGATCTGTTCTATGATTTCTTAGCATGGTTTGGCTTTTGAGTTTGAAT
TTTCCATCTACAAACTACAGTTGAAAAGACAGCCAATGAAATTTAGTTAT
TTTCACTGGTCACACTTTGTCAGAAAAAAAACACAGGTTTTAAAATTGTT
TTAATTTTCGTTAGTAAGAAAAGCACTAAATGCGAATTTCCTACTGCAAA
TCTTTTGCGGTAAAAGTCGGCCTCACATGACCAGGTTATATAAAAACAGG
ACGGGTCTCCTGTCTAGTTCTAACACAGTGTATTCTTTTTCTCTCTTTCT
CCCTGCTTTCACTTTTTCTAATGAAAGTTAACTTACTTGCTTTGGAAGCG
TGCACTGTAGAAGTTATTCTTAACTCTTGATTGACAGTCTTATTAAGTCA
GTCTAGCAGAAAAACAATTTATTCAGCCTCTGGATTATGGGAAACCTGGA
AGGAGACCAGCCTTTTCTAATGACTTTGATTTATTTCTCCAGGAAATATT
TAACGAGGAAAGACTTACTGATATGTAGTCCACGACACCATAGCATGTTC
AATTCTTCTCAACGTGACTTTGTTTTTGTTCGATCTACATCCACTTGCTC
TGGTTTCAACTCTTGTAAAATCATTGAAGTAGTCAAGGAAAATAGGTATC
TTTATTCATGTAGTTATTTTTTGGTTGTGTGTTTGAGCAATTTTTTAACC
TGACTGACGGAAGACTCTGATCGTTCGAAACAATAAAACTTGATCTTTTG
AGTTAATTATGTCTTGTAAACGAGTTTTTGGACCTAACGAACTACTCGTA
TTGTTTGTAAAAAATTGGAATAGATTTTGATTCCTATTTTTATTAACTTC
TCATTTGTTAATTTTCAGTTTACCAAAGTGCCCTGAAGAACGACATTGTG
TTGCTGTCGACTATCCAATGTTTCTTTCGTCCTACATGCCAAAGGTAGTA
CAGTAAAGTTAACTTCTACTTTTATCGGGTTAATTTCCGCAAGATTTTCT
GGATTTTTTTTCGCGAAGCTGTTTTTTAAACATTTCGGGTGGATCAAATT
TCACGACTCAGCCAAAAATAATTTGAATATGGCCCTGAAAATGCCAATTT
TTTTCTCAAATAGCAATTTTAAAAGATATTTTTAGCCGAAAATCTGATCT
TTAAAATTGCGCGTGGATTAATTTCACAAGTTTGATTATGATAAGGCCGG
CCTAAAAATTACATTGGTTTGCTGTCACGAGACCGAAACCTACTCAAAAT
ATGTCTAGTGAAAATTATATATAATTAAGAATTTTCCACTTCAAAACCTA
GGGTTGGCGGAAAACTAACTTTTTTAATGCCAGGTTTTCGAATAAAAATG
GCAATTAAAACTATTTGAATGAAATATTTTTCAGGTATACTCTCCACCTA
TCGAAGTGTATTGCAGCGATCGCAGTGCAGCGTATCAGTATAAACGCCGG
GCTTTTGGAACTGATGATCTATTGGAGTTTTACATGCATGGCCCTTGCTC
ACAACCTACCAATCGACAGCTATTGTTTTATCCACCACCACGACAAGGCT
TGCAAGCATTGCAGCCTGTCAATGGATGGTCCAGGGTTCGAGTTCCTAGT
GAGTTACATTTCTTCGTAGTACATTGTGTTTCTTTGTTGAAACATAAACA
CAGGGTACATTACGAACATATACTTCAAAATACTACTAAACATTAATATA
GTCCCTCCCTCCGTTAGAAACTTAAGTTATATTGTCAGAGGTAGTACATT
TTAGACTTGTGTTTCTTCAGAGAAAAAAAGTTTTTTTTTTAAGACATTAC
ATATGGCGCGCCGAATTACTTTTTATTACCAACTTTTTTTTTTCGACACC
AACTTTTTTTTTCGACACCAACTTTTTTTCCGACACCAACTTTTTTTCCG
ATACCAACTTTTTTTCAGGACCCGGATACGAAACTTCTTTTTGGTTATTG
TCTCGCCCACCCAACCTGATTAATATAATATGTTTCTGGGGCTTTAACAA
ATTGAGTGCCGTGTGAAACTTTTCCAGATGGAATTGAAAAAATAAAAAGA
CTGACTTTAGGACGAAGTCTGGAAGTTTGTTTTGGTTGAACTTGAAGTCA
TTCCTTATAGTCAAGTACTTTGTGTTTTACTTCAAATTTGGTTTGTGAAC
TTTCTGTTTTTTTTAACTTAACCCTGTTAAGTACTTTTTTTTGCACAAGT
TAGCTAGAACCATTAAGGGACAGAAGAACCTTTTCTATGAGTAGTTTTTT
TTAAACTTCTTCCTGAGACACGTGACATTACAATAGAATTTCAGCGCTTG
ACCAATCAGAAGCTTTGCGGATTTTCGGAAACAATAGCAGATGTTCATTT
TTTTTTGCTTCGAAGAGCTGAAAGCACTCCATCTAGCCCTACTTCAGGCT
TTACAGAAATCTGTGATATGTACATGTATTTACCGCTATATAAACGTAAA
GGCCTTTTTACACTTTGAGTAATCAACGTTAGCAGGTAATCGAGACAAGA
GTTAGTATCGGAAAATAAAAGTTGGTAGGAAGGGAAAAAAATGGTATCAA
AAAAAAAGTGTGATATCGAAGAAAAAAAAGTTGGTGTCGAAAAAAAAAGG
TTGGTGTCGAAAAAAAAAGTTGGTGTCGAAAAAAAAAAGTTGGTAATAAA
AAGTAATTCGGCGCGCCATAATTACATCTGAATGTAAACATTGTTTGGAG
AAATCCTTTTTGATTTTTCAAACGTGGTGTTCGATAAGTGCAAAACATGT
TCAAAGAGTGCGCTTGGATATATTGTACTGGAATCGTCTGATGATTCACA
GTCAACTCTTTTCAAGATAACAGTGTTGCAATTTTTCCGTCTGTAAACGG
AGGTCCGTCTAGTTGAGACACAAATATGCTATTTCCGTCTTTCAAGAAAG
AGGGTTTCGCTTCAAATGAGAGTAATGAGAATCTAATCCTAAAGTTTCCG
TCCATATTCACAAAACCCAGTTGCAACACTGAAATTATGAAGTGATTTTT
CGTCGTAAAGACTTTGAAGTGCTGTACCATATATAAGAAATTTGGCGGTT
TATACCTTTAGCATCTAACGGTACTTGTGTCTCGATTCTGCGTCCAATAT
ACAATTTGGTGATTTGATATCTTTCTCTTTTTCCTACATCCGTAGATCGG
ACAGCCTTGTTATCAGACAGTGGTAAGTTACTGGTGCTCGATCAGCTATT
AACCAGAATGAAACGAGAAGGACATAGAGTGCTCATCTATTCCCAAATGA
CCAAAATGATCGACATTCTGGAGGTGAGTTCTGAATGATTATTTTATCAT
TGCATTATCAATATTTTTATGTTTTATTTAAGAATCAATAAAAAATGGTT
GAGAATAGAAAGCCAAGGATCTACCGTGTGATGTGAAACTTAAACATAAC
GAGTAAAGAACTATATTGGAAGGCTTAATACGATAATTTTGATTGTATTG
TATTAATGTGTACTTACCATTTAATTTCTGGTGCAAATATATGGTGAAAA
AGTCATTTGTAATTAGGAGCTGGCACAGAGCGAGCACTTTGAGGCTCAAA
ATTGAAAAGTTATGAGAATTGCGAGGAGACTCACTTCGATTTATGTAACT
GTGTATCTAACTTTTCGAGTAGAAAAATACACACTAAAAATAAAATCAAA
ATATATCATTTAACATTTGCTTTCGAATTTTAAGGAGTTCATGAACTATC
GGCAACATTCTTATATAAGATTGGATGGCTCCTCCAAGATTTCCGATCGG
CGTGATATGGTCAATGATTTCCAAAGCAGGTATTGAAAGAATTTTCTTTG
TTTTATAAAGTTTTGTTTGAAGAGAGCAGTAACCTATTACAATTTTTAAA
TTCTATATTTTTCGGTGATTGTTTTCAAAATTTGACCTTTTAAAAATGGT
TTCAAATTATAACATAGTACGATTATATTAGCGAGTTTATGTATTTACAC
TTTCGAGGACGTTGGAGTGACCGACGCGATTTGGAGATTTGGAATAACCC
ACAGTTTTGACCCGTAAAAGCGAGGACGGTAATAGTGCTTGTTCACCGTC
GTTTTCAGTCAATCTAGAAAAATCAGAAAAACGTAGCAGAAAAACACATA
CATAAACTTCCCCATTCTTTTAAAAAGAATGATGATTTTGATTGATATAA
CTTCTGTTCTGCTTTGATGTATTTTCTCCATCGTGCTATCTTTCATATGG
CTTCCGAAGCAACAATCTTTTCCAGGCTAAACATGGATCAAATATCGCAA
ATTACCACAAACATGTTTTTATTGACCTTTGAAACTCTTACCAGCCGACT
GGTTTAAAGTCTCCTTTATACAATCTTTATGAGGAAATCTCTACTTCTGA
TATTTTTCAGGGATGACATCTTCGCATTTCTATTAAGTACGCGTGCAGGA
GGTCTGGGCATTAATCTCACGGCGGCTGACACCGTAAGTCACTTCAAATG
ATACCTGTGCTAAAATCTTTTTTGAGTATTTCTGTGTATTTTTGAAACTT
GGAACTTACACTTATCCCTGAATTTATCATTCTAAATCATTCTCTCTTCA
ACTTGAACATCTAAAACTCGAATGTCTCCTTAACTCAAAGAAGTTTTATG
GTTCCTTCAGTTAGTAAAACCCTACTCCATAACTCCAAAAAATTGTGTCC
CCCGTGCGTGTTCGATTTATGGAGACACCACTGTATATTTAACCAATGTA
ACAACTTGAGCCTCTCCACGGAGATTTCCTGGAATATTTACAATTTTAGC
ACCAGAAGAATCCTTCTCTATATCCCTTATAAAAAAAGCTTTTTCAACTA
ACTCTTGCTCTACTTTGTACAGGTCATATTTTACGACAGCGATTGGAATC
CGACTGTGGATCAACAGGTACATTTTCTCTTTTCTCCCTCTTTCAATTTA
AATCTCTGCCTATTCGATGTAAAGGGCGACAGTTTTTTTCTTAACCTTTT
TTGCCTGGAAAAAAGATTACGTCATAAAAAAGTTTCGTGCGAACAAAAAA
AAAGTTGAAGGAAGTTCAACTTTTTTCATCCGTTTTACGTCAATTTCGAC
CAATGGAATTGCTTCCTTTTTCAAACGACCAATGACCTTACAAAAACGTC
AAAAAGTTTTCGCTCGTGTCGCGCGAAAGTGGAGACCAGCCTTAAGAATT
TCTATGGAAATATATTACCATTTTCACTTCTAATGCAACTGGGTGAAAAT
GTTAGGACGTTGGAAGGAACTTTGATTTAAAACCGAAACCCTTGTCGGTG
ACGCCTTAGAACACTCGGCTATTACTCCTTAAAAATCATAAAATTTAGCA
TACTTTGAAATATCTATCATATGTTTTTTAAGGCTATGGATCGTGCGCAC
AGGCTGGGTCAAAAGAGACAAGTGACAGTTTACAGGCTTGTTACTAAGGG
AACGGTGGAGGAGAAGATCTTGAACAGAGCTCGTGAAAAGAGCGAGGTAA
GAAAGATGGGATAATGTGGTGTACTTTATTTAGGTGCAAGCAAAAATAAT
TCAATAGCTTTTATGGTAAAAAATATCAATCCTTTCGATATAAAAGCTAT
GCCAACAATATGTTTACCGTCGTCCTCAGCTGATCAGGATCTAGGAAATC
AGGAGCTAACCGTCTCTGTCGCAGAAAAAGCAAAATACACTCACTATCGT
TAATTAGACTTTAAATTTTTTGGTTCAATCCCGACAATGCTTAACATTAT
TGTTTTTAGATTCAAAACATTGTGATATCAGGCGGCCAAATGAAAACAGA
CGTGTTACGACCGAAAGAAGTAGTTTCCTTGTTATTGGACGATGTCGAAT
TGGAAGCCAAGTGTAAGAAACTACCACCTTTGTATTTCTATAGGTTAAGT
AGTGTTCATGGGGAAAAGTGCGTTAAAAATATCCCTGGGGAATAGTATGT
TACAATAACCGTGGGGAGTAGTGTGTTACAATAACCCTGATCTTTAGTAT
TACAGGTGCTTAGGACTTTTGGTACGCCACATCCCCCTGGAAACAATCAT
TATCAGCAGTACGCTGTTGCGCCACAACAAGGAGGGTCACTTAATTCCAT
ATTCATTTCGTATCTCTCAAAGGAAATACCACCATTAATATTTTTCTTTG
TAGTGAAACAAAAGCAAGCAGAAAAGAAGTTGGCAGAAATGTCTGGTAAA
CGACCAGGTCGGAAAAGAAAGAACCCTGTCGAACAGAATGTAAATCATCT
CTTTCTTTTGTCTTTAAAATTTATTCACTTTATCAATGCTTTCAGATGTA
AACGTTCATAATCCGATGGCAGTCTTGGTTCACGCTGACAAGTAGTATAG
TATTATACTCTGTTGGGTGTGTCCCAGGCCTAATTCGCACCCTCCCTCTC
AAAAATATTTCCAAATACTGCACTTTACTATCAAATTTTTAATCATCATG
AATCAATTGGTGTTGTCCTATGAAAAATGTCACGGGACCACAGGCTTTGT
CCCCTTACCTGCCTTTTGTTGATCGTGTAGTGAATATCTCTGAATTAATT
TTTCCTTGTTTGTAGTATTTTTACGGCTCAACAATAAGCTCTTCTAACTG
AAGGTCTTTTTCTTGCCTTATCCCCTTCAGAATGGAGAGCCATCGAAGCT
ACAAAGAACAGTGAGCGACGGGCCGGCAGACGTTTTGAAGAATGCAGATC
ATTTGCTACAACGCACTGATTCTTTCGAATCCATTGATGAAAACAGCATG
TCCAGTATTGATTTCTCCGGTAAGTTTGAAAAGGAATCTGTTTGCTGATT
TCTTTTCCTGGGGGCTTTCTCCCTGATTTATAATAAGCAGTTATTGGACA
GCAAAGAAGCCAATCAAATGTCGCTATTTACGCGCGTCGGATAATAAACT
AGAATAGACTATTAACAAAGAAATATATTCCATGCCAATATTTTTTGTAG
GTGTCAACCAATCAGAAGTTGCGACTGACGGTTCATCTCGTCCTCCATCA
GCTACTGGCAGCCCCGGTCAAAGTCCATCGACTTCTGGTACGAAGAGAGG
TCGTGGTCGCGGGCGGGGAAGAGGAGGAAAAGCAAAGTCTGGCTCCTTAG
CTAAGGCGGCTGCCTCGGTTGCTGCAGCAGCAGGTGCAATGGCAGGGCGG
GATGCAGCTTACGCCCAATATGGATATTCATTTCAAAAGAACTCGTAGCG
TTTACTGTTTTATTTTCGACTGTCCATTTTTAGTGTTTATTTTTTACCAA
ATCGATAGAGAAATTTTATATTTATTCGTATGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012950XLOC_012950Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023059-exon-sc0000439-1575043694:97004..97043TCONS_00023059-exon-sc0000439-1575043694:97004..97043Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:95890..95971TCONS_00023059-exon-sc0000439-1575043694:95890..95971Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:94654..94767TCONS_00023059-exon-sc0000439-1575043694:94654..94767Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:93299..93451TCONS_00023059-exon-sc0000439-1575043694:93299..93451Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:93000..93075TCONS_00023059-exon-sc0000439-1575043694:93000..93075Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:92346..92559TCONS_00023059-exon-sc0000439-1575043694:92346..92559Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:90671..90798TCONS_00023059-exon-sc0000439-1575043694:90671..90798Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:90165..90259TCONS_00023059-exon-sc0000439-1575043694:90165..90259Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:89511..89583TCONS_00023059-exon-sc0000439-1575043694:89511..89583Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:89077..89121TCONS_00023059-exon-sc0000439-1575043694:89077..89121Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:88498..88611TCONS_00023059-exon-sc0000439-1575043694:88498..88611Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:88132..88234TCONS_00023059-exon-sc0000439-1575043694:88132..88234Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:87755..87840TCONS_00023059-exon-sc0000439-1575043694:87755..87840Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:87225..87363TCONS_00023059-exon-sc0000439-1575043694:87225..87363Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1575043694:86708..87043TCONS_00023059-exon-sc0000439-1575043694:86708..87043Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:97004..97043TCONS_00023059-exon-sc0000439-1510915933:97004..97043Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:95890..95971TCONS_00023059-exon-sc0000439-1510915933:95890..95971Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:94654..94767TCONS_00023059-exon-sc0000439-1510915933:94654..94767Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:93299..93451TCONS_00023059-exon-sc0000439-1510915933:93299..93451Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:93000..93075TCONS_00023059-exon-sc0000439-1510915933:93000..93075Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:92346..92559TCONS_00023059-exon-sc0000439-1510915933:92346..92559Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:90671..90798TCONS_00023059-exon-sc0000439-1510915933:90671..90798Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:90165..90259TCONS_00023059-exon-sc0000439-1510915933:90165..90259Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:89511..89583TCONS_00023059-exon-sc0000439-1510915933:89511..89583Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:89077..89121TCONS_00023059-exon-sc0000439-1510915933:89077..89121Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:88498..88611TCONS_00023059-exon-sc0000439-1510915933:88498..88611Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:88132..88234TCONS_00023059-exon-sc0000439-1510915933:88132..88234Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:87755..87840TCONS_00023059-exon-sc0000439-1510915933:87755..87840Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:87225..87363TCONS_00023059-exon-sc0000439-1510915933:87225..87363Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1510915933:86708..87043TCONS_00023059-exon-sc0000439-1510915933:86708..87043Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:97004..97043TCONS_00023059-exon-sc0000439-1491911889:97004..97043Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:95890..95971TCONS_00023059-exon-sc0000439-1491911889:95890..95971Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:94654..94767TCONS_00023059-exon-sc0000439-1491911889:94654..94767Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:93299..93451TCONS_00023059-exon-sc0000439-1491911889:93299..93451Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:93000..93075TCONS_00023059-exon-sc0000439-1491911889:93000..93075Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:92346..92559TCONS_00023059-exon-sc0000439-1491911889:92346..92559Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:90671..90798TCONS_00023059-exon-sc0000439-1491911889:90671..90798Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:90165..90259TCONS_00023059-exon-sc0000439-1491911889:90165..90259Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:89511..89583TCONS_00023059-exon-sc0000439-1491911889:89511..89583Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:89077..89121TCONS_00023059-exon-sc0000439-1491911889:89077..89121Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:88498..88611TCONS_00023059-exon-sc0000439-1491911889:88498..88611Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:88132..88234TCONS_00023059-exon-sc0000439-1491911889:88132..88234Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:87755..87840TCONS_00023059-exon-sc0000439-1491911889:87755..87840Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:87225..87363TCONS_00023059-exon-sc0000439-1491911889:87225..87363Clytia hemisphaericaexon
TCONS_00023059-exon-sc0000439-1491911889:86708..87043TCONS_00023059-exon-sc0000439-1491911889:86708..87043Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000439supercontigsc0000439:86708..97043 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.36938	9.06831	2.70661	3.92463	21.3844	9.32816	8.29125	3.57605	6.45177	6.10411	8.87658	9.29051	11.6671	2.79504	9.91542	10.4939	11.6757	8.42851	7.67055	6.14288	8.45563	8.57868	12.3718	13.2489	20.3076	7.74813	2.96719	5.27385	10.4474	11.4726
Blast
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BLAST of TCONS_00023059 vs. Swiss-Prot (Human)
Match: INO80 (DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2)

HSP 1 Score: 361.303 bits (926), Expect = 1.971e-109
Identity = 196/391 (50.13%), Postives = 257/391 (65.73%), Query Frame = 1 
Query:   52 FSFSRFINLSPKELV-LLFRSQIFRLIHSFLVLSHLQHTHTLQPFITRAEDDGSNFHNEPSQKKYLTRKDLLICSPRHHSMFNSSQ----RDFVFVRSTSTCSGFNSCKIIEVVKENSLPKCPEERHCVAVDYPMFLSSYMPKVYSPPIEVYCSDRSAAYQYKRRAF---GTDDLLEFYMHGP---CSQPTNRQLLFYPPPRQGLQALQPVNGWSRVRVPNRTALLSDSGKLLVLDQLLTRMKREGHRVLIYSQMTKMIDILEEFMNYRQHSYIRLDGSSKISDRRDMVNDFQSRDDIFAFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQKRQVTVYRLVTKGTVEEKILNRAREKSEIQNIVISGGQMKTDVLRPK 1191
            FSF RFI++SP E+  L+ +  + R +  FL L      H L+ +      +G       S ++YL  KD L+      S  N       +  VF       SG++     +VV +         R C+  + P FL    P+V + P++ YC+DRSA  +Y+RR     G+    +  ++G     +   NR+  F+P P  GL +++P NGWS +R+P + +L++DSGKL  LD LLTR+K +GHRVLIYSQMT+MID+LEE+M YR+H+Y+RLDGSSKIS+RRDMV DFQ+R+DIF FLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ +QVTVYRL+ KGT+EE+IL RA+EKSEIQ +VISGG  K D L+PK
Sbjct:  888 FSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSW---GAPEGE------SHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSD----QVVHQRR-SATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSA--EYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPK 1262
The following BLAST results are available for this feature:
BLAST of TCONS_00023059 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INO801.971e-10950.13DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 S... [more]
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