TCONS_00023057 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023057
Unique NameTCONS_00023057
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1880

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023057 ID=TCONS_00023057|Name=TCONS_00023057|organism=Clytia hemisphaerica|type=transcript|length=1880bp
NAATATGGAATACACAGAATATTTACCAGTCCCTTGAAAAAGGTGTTGGT
TCTTTCAGCTTTTCTCGCTTTATCAATTTATCTCCAAAAGAACTTGTATT
ATTGTTTCGTTCACAAATTTTTCGGTTAATCCACAGTTTTCTGGTACTTT
CTCACTTACAACACACGCACACATTGCAACCATTCATAACGAGAGCAGAG
GATGATGGATCAAATTTCCACAATGAACCCTCACAAAAGAAATATTTAAC
GAGGAAAGACTTACTGATATGTAGTCCACGACACCATAGCATGTTCAATT
CTTCTCAACGTGACTTTGTTTTTGTTCGATCTACATCCACTTGCTCTGGT
TTCAACTCTTGTAAAATCATTGAAGTAGTCAAGGAAAATAGTTTACCAAA
GTGCCCTGAAGAACGACATTGTGTTGCTGTCGACTATCCAATGTTTCTTT
CGTCCTACATGCCAAAGgtATACTCTCCACCTATCGAAGTGTATTGCAGC
GATCGCAGTGCAGCGTATCAGTATAAACGCCGGGCTTTTGGAACTGATGA
TCTATTGGAGTTTTACATGCATGGCCCTTGCTCACAACCTACCAATCGAC
AGCTATTGTTTTATCCACCACCACGACAAGGCTTGCAAGCATTGCAGCCT
GTCAATGGATGGTCCAGGGTTCGAGTTCCTAATCGGACAGCCTTGTTATC
AGACAGTGGTAAGTTACTGGTGCTCGATCAGCTATTAACCAGAATGAAAC
GAGAAGGACATAGAGTGCTCATCTATTCCCAAATGACCAAAATGATCGAC
ATTCTGGAGGAGTTCATGAACTATCGGCAACATTCTTATATAAGATTGGA
TGGCTCCTCCAAGATTTCCGATCGGCGTGATATGGTCAATGATTTCCAAA
GCAGGGATGACATCTTCGCATTTCTATTAAGTACGCGTGCAGGAGGTCTG
GGCATTAATCTCACGGCGGCTGACACCGTCATATTTTACGACAGCGATTG
GAATCCGACTGTGGATCAACAGGCTATGGATCGTGCGCACAGGCTGGGTC
AAAAGAGACAAGTGACAGTTTACAGGCTTGTTACTAAGGGAACGGTGGAG
GAGAAGATCTTGAACAGAGCTCGTGAAAAGAGCGAGATTCAAAACATTGT
GATATCAGGCGGCCAAATGAAAACAGACGTGTTACGACCGAAAGAAGTAG
TTTCCTTGTTATTGGACGATGTCGAATTGGAAGCCAAGTTGAAACAAAAG
CAAGCAGAAAAGAAGTTGGCAGAAATGTCTGGTAAACGACCAGGTCGGAA
AAGAAAGAACCCTGTCGAACAGAATAATGGAGAGCCATCGAAGCTACAAA
GAACAGTGAGCGACGGGCCGGCAGACGTTTTGAAGAATGCAGATCATTTG
CTACAACGCACTGATTCTTTCGAATCCATTGATGAAAACAGCATGTCCAG
TATTGATTTCTCCGGTGTCAACCAATCAGAAGTTGCGACTGACGGTTCAT
CTCGTCCTCCATCAGCTACTGGCAGCCCCGGTCAAAGTCCATCGACTTCT
GGTACGAAGAGAGGTCGTGGTCGCGGGCGGGGAAGAGGAGGAAAAGCAAA
GTCTGGCTCCTTAGCTAAGGCGGCTGCCTCGGTTGCTGCAGCAGCAGGTG
CAATGGCAGGGCGGGATGCAGCTTACGCCCAATATGGATATTCATTTCAA
AAGAACTCGTAGCGTTTACTGTTTTATTTTCGACTGTCCATTTTTAGTGT
TTATTTTTTACCAAATCGATAGagaaattttatatttattcGTATGATAG
ATGCATAGTAGGTCATCATATTGAAGATTGAAAAACGATGCTGCCTCatt
ttttgttatgattttATTTTCTCGACTTTG
Run BLAST on NCBI

transcript from alignment at sc0000439:84851..97045-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023057 ID=TCONS_00023057|Name=TCONS_00023057|organism=Clytia hemisphaerica|type=transcript|length=12195bp|location=Sequence derived from alignment at sc0000439:84851..97045- (Clytia hemisphaerica)
NAATATGGAATACACAGAATATTTACCAGTCCCTTGAAAAAGGTTGGTTT
GTTTTATACAGTGGAGTCTCTTTAACTTGAACCTCTATAACTCGAATATC
TCCCTAACTCGAACAAGCTTTCTCCTCCCTTCAGTTAACAATACGGAGTT
TATGTATGTGTGTTTTTCAGCGACGGAGACGGTAAGGTTCTAATTTGACT
AGATCATGACCAACTGAGGACGACGGTAAATCAGCAATTTTACCGTCCTC
GATTTTGCGGGTCAGAACTGCGGGTTTTTCCAAATTGCTTCAGTCAATTT
ACCGTCCTCAAAAGTGCAAATACATAAACTCACTAATTTCTTATAAACCT
TACTCCAAAATTGAAATTTCCTTAACAAATTTGTGTTCCCCGTGTTATGG
CCACATTAATTAACTATACTTAAACATTTTGAATAAATGTATCCAAAGTA
GCGACCGTAGTACAGTGGTAGAGCATCCGGCTACGGTTCGCAAGGTTGTG
GGTTCAACCCCCAGCCGGGTCATACCAAAGATTCCCAAAATGGCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCAGGGAGAAAGAGTGGCGCCCTCCC
CTACCTTCGGGTAGATAGCTATCGAAAGAGGAGCCTTCGGGTCGCCTCCG
ACTGCGGTCGCAGACTTACTATCCAAAGTTACCTTACTGGATCGAACGGT
TTGCCCGGTTCCTCGGTCATTCCGGCCATCGCTGTCCATCAAAGATGTCA
TAAGTTCTATTTGGACCAAATATAAAACCTACAATCGTGGTAATTTTTGG
TGAATTAACACATGCTAAAACTTTTGTCATGGTGTTCGCCACTCTAGATT
GACGTGAATGATCTGTTTTTTTCTGTTACTGTCTGAACGGCTTAATTTTG
ATTATTACTTGTTTTTTTCGTTAGGTGTTGGTTCTTTCAGCTTTTCTCGC
TTTATCAATTTATCTCCAAAAGAACTTGTATTATTGTTTCGTTCACAAAT
TTTTCGGTGAGTATGTTTAAACATTATAATGATAATTATAAGTGAGAGTC
GTGAATTTCTTCTAGAGTTTTCGGTGGTAAATTCAATAAGCAGTCGGTGT
TGCTTTAGCAACCTTTTATGCTATTAAGTTGAGAAAAAATAATCTCTTGA
TATTCTGACATTGGACATCTAGGAAAAATCTGTTCATAGGGAGGAGGTTG
GACAGCTTAACTCATCATCATTCACTAAAATTTACCCATTGACAGGGCAA
ATCTACCCTTTGGACAGGGCAGGTTTTCTCAATTTTTATACTCCTCCTGG
ACGGTGTATCTTCAACCGTTTGTACGGTTGTTTTCTGGAAGAACCCATTG
ATATATTGTTTATTCAAACACGCATCATCAATGACTAATGAAATTAAGAG
AGTCTTTTCGCCCATTCTTAAGAAATACGATTTATGATTCTTCAGGTTAA
TCCACAGTTTTCTGGTACTTTCTCACTTACAACACACGCACACATTGCAA
CCATTCATAACGAGAGCAGAGGATGATGGATCAAATTTCCACAATGAACC
CTCACAAAAGTAAGTGCTTCTACTCTAACATAGCCTGGAGATCTGTTCTA
TGATTTCTTAGCATGGTTTGGCTTTTGAGTTTGAATTTTCCATCTACAAA
CTACAGTTGAAAAGACAGCCAATGAAATTTAGTTATTTTCACTGGTCACA
CTTTGTCAGAAAAAAAACACAGGTTTTAAAAATAGCAATTTCTTCTAGAG
TTTTCGGTGGTAAATTCAATAAGCAGTCGGTGTTGCTTTAGCAACCTTTT
ATGCCATTAAGTTGAGAAAAAATAATCTCTTGATATTCTGACATTGGACA
TCTAGGAAAAATCTGTTCATAGGGAGGAGGTTGGACAGCTTAACTCAACA
TCATTCACTAAAATTTACCCATTGACAGGGCAAATCTACCCTTTGGACAG
GGCAGGTTTTCTCAATTTTTATACTCCTCCTGGACGGTGTATCTTCAACC
GTTTGTACGGTTGTTTTCTGGAAGAACCCATTGATATATTGTTTATTCAA
ACACGCATCATCAATGACTAATGAAATTAAGAGAGTCTTTTCGCCCATTC
TTAAGAAATACGATTTATGATTCTTCAGGTTAATCCACAGTTTTCTGGTA
CTTTCTCACTTACAACACACGCACACATTGCAACCATTCATAACGAGAGC
AGAGGATGATGGATCAAATTTCCACAATGAACCCTCACAAAAGTAAGTGC
TTCTACTCTAACATAGCCTGGAGATCTGTTCTATGATTTCTTAGCATGGT
TTGGCTTTTGAGTTTGAATTTTCCATCTACAAACTACAGTTGAAAAGACA
GCCAATGAAATTTAGTTATTTTCACTGGTCACACTTTGTCAGAAAAAAAA
CACAGGTTTTAAAAATAGCAATTTCTTCTAGAGTTTTCGGTGGTAAATTC
AATAAGCAGTCGGTGTTGCTTTAGCAACCTTTTATGCCATTAAGTTGAGA
AAAAATAATCTCTTGATATTCTGACATTGGACATCTAGGAAAAATCTGTT
CATAGGGAGGAGGTTGGACAGCTTAACTCAACATCATTCACTAAAATTTA
CCCATTGACAGGGCAAATCTACCCTTTGGACAGGGCAGGTTTTCTCAATT
TTTATACTCCTCCTGGACGGTGTATCTTCAACCGTTTGTACGGTTGTTTT
CTGGAAGAACCCATTGATATATTGTTTATTCAAACACGCATCATCAATGA
CTAATGAAATTAAGAGAGTCTTTTCGCCCATTCTTAAGAAATACGATTTA
TGATTCTTCAGGTTAATCCACAGTTTTCTGGTACTTTCTCACTTACAACA
CACGCACACATTGCAACCATTCATAACGAGAGCAGAGGATGATGGATCAA
ATTTCCACAATGAACCCTCACAAAAGTAAGTGCTTCTACTCTAACATAGC
CTGGAGATCTGTTCTATGATTTCTTAGCATGGTTTGGCTTTTGAGTTTGA
ATTTTCCATCTACAAACTACAGTTGAAAAGACAGCCAATGAAATTTAGTT
ATTTTCACTGGTCACACTTTGTCAGAAAAAAAACACAGGTTTTAAAATTG
TTTTAATTTTCGTTAGTAAGAAAAGCACTAAATGCGAATTTCCTACTGCA
AATCTTTTGCGGTAAAAGTCGGCCTCACATGACCAGGTTATATAAAAACA
GGACGGGTCTCCTGTCTAGTTCTAACACAGTGTATTCTTTTTCTCTCTTT
CTCCCTGCTTTCACTTTTTCTAATGAAAGTTAACTTACTTGCTTTGGAAG
CGTGCACTGTAGAAGTTATTCTTAACTCTTGATTGACAGTCTTATTAAGT
CAGTCTAGCAGAAAAACAATTTATTCAGCCTCTGGATTATGGGAAACCTG
GAAGGAGACCAGCCTTTTCTAATGACTTTGATTTATTTCTCCAGGAAATA
TTTAACGAGGAAAGACTTACTGATATGTAGTCCACGACACCATAGCATGT
TCAATTCTTCTCAACGTGACTTTGTTTTTGTTCGATCTACATCCACTTGC
TCTGGTTTCAACTCTTGTAAAATCATTGAAGTAGTCAAGGAAAATAGGTA
TCTTTATTCATGTAGTTATTTTTTGGTTGTGTGTTTGAGCAATTTTTTAA
CCTGACTGACGGAAGACTCTGATCGTTCGAAACAATAAAACTTGATCTTT
TGAGTTAATTATGTCTTGTAAACGAGTTTTTGGACCTAACGAACTACTCG
TATTGTTTGTAAAAAATTGGAATAGATTTTGATTCCTATTTTTATTAACT
TCTCATTTGTTAATTTTCAGTTTACCAAAGTGCCCTGAAGAACGACATTG
TGTTGCTGTCGACTATCCAATGTTTCTTTCGTCCTACATGCCAAAGGTAG
TACAGTAAAGTTAACTTCTACTTTTATCGGGTTAATTTCCGCAAGATTTT
CTGGATTTTTTTTCGCGAAGCTGTTTTTTAAACATTTCGGGTGGATCAAA
TTTCACGACTCAGCCAAAAATAATTTGAATATGGCCCTGAAAATGCCAAT
TTTTTTCTCAAATAGCAATTTTAAAAGATATTTTTAGCCGAAAATCTGAT
CTTTAAAATTGCGCGTGGATTAATTTCACAAGTTTGATTATGATAAGGCC
GGCCTAAAAATTACATTGGTTTGCTGTCACGAGACCGAAACCTACTCAAA
ATATGTCTAGTGAAAATTATATATAATTAAGAATTTTCCACTTCAAAACC
TAGGGTTGGCGGAAAACTAACTTTTTTAATGCCAGGTTTTCGAATAAAAA
TGGCAATTAAAACTATTTGAATGAAATATTTTTCAGGTATACTCTCCACC
TATCGAAGTGTATTGCAGCGATCGCAGTGCAGCGTATCAGTATAAACGCC
GGGCTTTTGGAACTGATGATCTATTGGAGTTTTACATGCATGGCCCTTGC
TCACAACCTACCAATCGACAGCTATTGTTTTATCCACCACCACGACAAGG
CTTGCAAGCATTGCAGCCTGTCAATGGATGGTCCAGGGTTCGAGTTCCTA
GTGAGTTACATTTCTTCGTAGTACATTGTGTTTCTTTGTTGAAACATAAA
CACAGGGTACATTACGAACATATACTTCAAAATACTACTAAACATTAATA
TAGTCCCTCCCTCCGTTAGAAACTTAAGTTATATTGTCAGAGGTAGTACA
TTTTAGACTTGTGTTTCTTCAGAGAAAAAAAGTTTTTTTTTTAAGACATT
ACATATGGCGCGCCGAATTACTTTTTATTACCAACTTTTTTTTTTCGACA
CCAACTTTTTTTTTCGACACCAACTTTTTTTCCGACACCAACTTTTTTTC
CGATACCAACTTTTTTTCAGGACCCGGATACGAAACTTCTTTTTGGTTAT
TGTCTCGCCCACCCAACCTGATTAATATAATATGTTTCTGGGGCTTTAAC
AAATTGAGTGCCGTGTGAAACTTTTCCAGATGGAATTGAAAAAATAAAAA
GACTGACTTTAGGACGAAGTCTGGAAGTTTGTTTTGGTTGAACTTGAAGT
CATTCCTTATAGTCAAGTACTTTGTGTTTTACTTCAAATTTGGTTTGTGA
ACTTTCTGTTTTTTTTAACTTAACCCTGTTAAGTACTTTTTTTTGCACAA
GTTAGCTAGAACCATTAAGGGACAGAAGAACCTTTTCTATGAGTAGTTTT
TTTTAAACTTCTTCCTGAGACACGTGACATTACAATAGAATTTCAGCGCT
TGACCAATCAGAAGCTTTGCGGATTTTCGGAAACAATAGCAGATGTTCAT
TTTTTTTTGCTTCGAAGAGCTGAAAGCACTCCATCTAGCCCTACTTCAGG
CTTTACAGAAATCTGTGATATGTACATGTATTTACCGCTATATAAACGTA
AAGGCCTTTTTACACTTTGAGTAATCAACGTTAGCAGGTAATCGAGACAA
GAGTTAGTATCGGAAAATAAAAGTTGGTAGGAAGGGAAAAAAATGGTATC
AAAAAAAAAGTGTGATATCGAAGAAAAAAAAGTTGGTGTCGAAAAAAAAA
GGTTGGTGTCGAAAAAAAAAGTTGGTGTCGAAAAAAAAAAGTTGGTAATA
AAAAGTAATTCGGCGCGCCATAATTACATCTGAATGTAAACATTGTTTGG
AGAAATCCTTTTTGATTTTTCAAACGTGGTGTTCGATAAGTGCAAAACAT
GTTCAAAGAGTGCGCTTGGATATATTGTACTGGAATCGTCTGATGATTCA
CAGTCAACTCTTTTCAAGATAACAGTGTTGCAATTTTTCCGTCTGTAAAC
GGAGGTCCGTCTAGTTGAGACACAAATATGCTATTTCCGTCTTTCAAGAA
AGAGGGTTTCGCTTCAAATGAGAGTAATGAGAATCTAATCCTAAAGTTTC
CGTCCATATTCACAAAACCCAGTTGCAACACTGAAATTATGAAGTGATTT
TTCGTCGTAAAGACTTTGAAGTGCTGTACCATATATAAGAAATTTGGCGG
TTTATACCTTTAGCATCTAACGGTACTTGTGTCTCGATTCTGCGTCCAAT
ATACAATTTGGTGATTTGATATCTTTCTCTTTTTCCTACATCCGTAGATC
GGACAGCCTTGTTATCAGACAGTGGTAAGTTACTGGTGCTCGATCAGCTA
TTAACCAGAATGAAACGAGAAGGACATAGAGTGCTCATCTATTCCCAAAT
GACCAAAATGATCGACATTCTGGAGGTGAGTTCTGAATGATTATTTTATC
ATTGCATTATCAATATTTTTATGTTTTATTTAAGAATCAATAAAAAATGG
TTGAGAATAGAAAGCCAAGGATCTACCGTGTGATGTGAAACTTAAACATA
ACGAGTAAAGAACTATATTGGAAGGCTTAATACGATAATTTTGATTGTAT
TGTATTAATGTGTACTTACCATTTAATTTCTGGTGCAAATATATGGTGAA
AAAGTCATTTGTAATTAGGAGCTGGCACAGAGCGAGCACTTTGAGGCTCA
AAATTGAAAAGTTATGAGAATTGCGAGGAGACTCACTTCGATTTATGTAA
CTGTGTATCTAACTTTTCGAGTAGAAAAATACACACTAAAAATAAAATCA
AAATATATCATTTAACATTTGCTTTCGAATTTTAAGGAGTTCATGAACTA
TCGGCAACATTCTTATATAAGATTGGATGGCTCCTCCAAGATTTCCGATC
GGCGTGATATGGTCAATGATTTCCAAAGCAGGTATTGAAAGAATTTTCTT
TGTTTTATAAAGTTTTGTTTGAAGAGAGCAGTAACCTATTACAATTTTTA
AATTCTATATTTTTCGGTGATTGTTTTCAAAATTTGACCTTTTAAAAATG
GTTTCAAATTATAACATAGTACGATTATATTAGCGAGTTTATGTATTTAC
ACTTTCGAGGACGTTGGAGTGACCGACGCGATTTGGAGATTTGGAATAAC
CCACAGTTTTGACCCGTAAAAGCGAGGACGGTAATAGTGCTTGTTCACCG
TCGTTTTCAGTCAATCTAGAAAAATCAGAAAAACGTAGCAGAAAAACACA
TACATAAACTTCCCCATTCTTTTAAAAAGAATGATGATTTTGATTGATAT
AACTTCTGTTCTGCTTTGATGTATTTTCTCCATCGTGCTATCTTTCATAT
GGCTTCCGAAGCAACAATCTTTTCCAGGCTAAACATGGATCAAATATCGC
AAATTACCACAAACATGTTTTTATTGACCTTTGAAACTCTTACCAGCCGA
CTGGTTTAAAGTCTCCTTTATACAATCTTTATGAGGAAATCTCTACTTCT
GATATTTTTCAGGGATGACATCTTCGCATTTCTATTAAGTACGCGTGCAG
GAGGTCTGGGCATTAATCTCACGGCGGCTGACACCGTAAGTCACTTCAAA
TGATACCTGTGCTAAAATCTTTTTTGAGTATTTCTGTGTATTTTTGAAAC
TTGGAACTTACACTTATCCCTGAATTTATCATTCTAAATCATTCTCTCTT
CAACTTGAACATCTAAAACTCGAATGTCTCCTTAACTCAAAGAAGTTTTA
TGGTTCCTTCAGTTAGTAAAACCCTACTCCATAACTCCAAAAAATTGTGT
CCCCCGTGCGTGTTCGATTTATGGAGACACCACTGTATATTTAACCAATG
TAACAACTTGAGCCTCTCCACGGAGATTTCCTGGAATATTTACAATTTTA
GCACCAGAAGAATCCTTCTCTATATCCCTTATAAAAAAAGCTTTTTCAAC
TAACTCTTGCTCTACTTTGTACAGGTCATATTTTACGACAGCGATTGGAA
TCCGACTGTGGATCAACAGGTACATTTTCTCTTTTCTCCCTCTTTCAATT
TAAATCTCTGCCTATTCGATGTAAAGGGCGACAGTTTTTTTCTTAACCTT
TTTTGCCTGGAAAAAAGATTACGTCATAAAAAAGTTTCGTGCGAACAAAA
AAAAAGTTGAAGGAAGTTCAACTTTTTTCATCCGTTTTACGTCAATTTCG
ACCAATGGAATTGCTTCCTTTTTCAAACGACCAATGACCTTACAAAAACG
TCAAAAAGTTTTCGCTCGTGTCGCGCGAAAGTGGAGACCAGCCTTAAGAA
TTTCTATGGAAATATATTACCATTTTCACTTCTAATGCAACTGGGTGAAA
ATGTTAGGACGTTGGAAGGAACTTTGATTTAAAACCGAAACCCTTGTCGG
TGACGCCTTAGAACACTCGGCTATTACTCCTTAAAAATCATAAAATTTAG
CATACTTTGAAATATCTATCATATGTTTTTTAAGGCTATGGATCGTGCGC
ACAGGCTGGGTCAAAAGAGACAAGTGACAGTTTACAGGCTTGTTACTAAG
GGAACGGTGGAGGAGAAGATCTTGAACAGAGCTCGTGAAAAGAGCGAGGT
AAGAAAGATGGGATAATGTGGTGTACTTTATTTAGGTGCAAGCAAAAATA
ATTCAATAGCTTTTATGGTAAAAAATATCAATCCTTTCGATATAAAAGCT
ATGCCAACAATATGTTTACCGTCGTCCTCAGCTGATCAGGATCTAGGAAA
TCAGGAGCTAACCGTCTCTGTCGCAGAAAAAGCAAAATACACTCACTATC
GTTAATTAGACTTTAAATTTTTTGGTTCAATCCCGACAATGCTTAACATT
ATTGTTTTTAGATTCAAAACATTGTGATATCAGGCGGCCAAATGAAAACA
GACGTGTTACGACCGAAAGAAGTAGTTTCCTTGTTATTGGACGATGTCGA
ATTGGAAGCCAAGTGTAAGAAACTACCACCTTTGTATTTCTATAGGTTAA
GTAGTGTTCATGGGGAAAAGTGCGTTAAAAATATCCCTGGGGAATAGTAT
GTTACAATAACCGTGGGGAGTAGTGTGTTACAATAACCCTGATCTTTAGT
ATTACAGGTGCTTAGGACTTTTGGTACGCCACATCCCCCTGGAAACAATC
ATTATCAGCAGTACGCTGTTGCGCCACAACAAGGAGGGTCACTTAATTCC
ATATTCATTTCGTATCTCTCAAAGGAAATACCACCATTAATATTTTTCTT
TGTAGTGAAACAAAAGCAAGCAGAAAAGAAGTTGGCAGAAATGTCTGGTA
AACGACCAGGTCGGAAAAGAAAGAACCCTGTCGAACAGAATGTAAATCAT
CTCTTTCTTTTGTCTTTAAAATTTATTCACTTTATCAATGCTTTCAGATG
TAAACGTTCATAATCCGATGGCAGTCTTGGTTCACGCTGACAAGTAGTAT
AGTATTATACTCTGTTGGGTGTGTCCCAGGCCTAATTCGCACCCTCCCTC
TCAAAAATATTTCCAAATACTGCACTTTACTATCAAATTTTTAATCATCA
TGAATCAATTGGTGTTGTCCTATGAAAAATGTCACGGGACCACAGGCTTT
GTCCCCTTACCTGCCTTTTGTTGATCGTGTAGTGAATATCTCTGAATTAA
TTTTTCCTTGTTTGTAGTATTTTTACGGCTCAACAATAAGCTCTTCTAAC
TGAAGGTCTTTTTCTTGCCTTATCCCCTTCAGAATGGAGAGCCATCGAAG
CTACAAAGAACAGTGAGCGACGGGCCGGCAGACGTTTTGAAGAATGCAGA
TCATTTGCTACAACGCACTGATTCTTTCGAATCCATTGATGAAAACAGCA
TGTCCAGTATTGATTTCTCCGGTAAGTTTGAAAAGGAATCTGTTTGCTGA
TTTCTTTTCCTGGGGGCTTTCTCCCTGATTTATAATAAGCAGTTATTGGA
CAGCAAAGAAGCCAATCAAATGTCGCTATTTACGCGCGTCGGATAATAAA
CTAGAATAGACTATTAACAAAGAAATATATTCCATGCCAATATTTTTTGT
AGGTGTCAACCAATCAGAAGTTGCGACTGACGGTTCATCTCGTCCTCCAT
CAGCTACTGGCAGCCCCGGTCAAAGTCCATCGACTTCTGGTACGAAGAGA
GGTCGTGGTCGCGGGCGGGGAAGAGGAGGAAAAGCAAAGTCTGGCTCCTT
AGCTAAGGCGGCTGCCTCGGTTGCTGCAGCAGCAGGTGCAATGGCAGGGC
GGGATGCAGCTTACGCCCAATATGGATATTCATTTCAAAAGAACTCGTAG
CGTTTACTGTTTTATTTTCGACTGTCCATTTTTAGTGTTTATTTTTTACC
AAATCGATAGAGAAATTTTATATTTATTCGTATGATAGNATCGTAATTGA
TTGATATTGAAGGTGCAAGCAAAAATAATTCAATAGCTTTTATGGTAAAA
AATAGCAATCCTTTCGATATAAAAGCTATGCCAACAATATAATTACCGTC
GTCCTCAGCTGATCAGGATCTAGGAAATTAGGAACTAACCGTCTCAGTCG
CAGAAAACGCAAAATACACTCACTATCGTTAATTAGACTTTAAATTTTTT
GGTTCAATCCGGACAATGCTTAACATTATTGTTTTTAGATTCAAAACATT
GTGATATCAGGCGGCCAAATGAAAACAGACGTGTTACGACCGAAAGAAGT
AGTTTCCTTGTTATTGGACGATGTCGAATTGGAAGCCAAGTGTAAGAAAC
TACCACCTTTGTATTTCTATAGGTTAAGTAGTGTTCATGGGGAAAAGTGC
GTTAAAAATATCCCTGGGGAATAGTATGTTACAATAACCGTGGGGAGTAG
TGTGTTACAATAACCCTGATCTTTAGTATTACAGGTGCTTAGGACTTTTG
GTACGCCACATCCCCCTGGAAACAATCATTATCAGCAGTACGCTGTTGCG
CCACAACAAGGAGGGTCACTTAATTCCATATTCATTTCGTATCTCTCAAA
GGAAATACCACCATTAATATTTTTCTTTGTAGTGAAACAAAAGCAAGCAG
AAAAGAAGTTGGCAGAAATGTCTGGTAAACGACCAGGTCGGAAAAGAAAG
AACCCTGTCGAACAGAATGTAAATCATCTCTTTCTTTTGTCTTTAAAATT
TATTCACTTTATCAATGCTTTCAGATGTAAACGTTCATAATCCGATGGCA
GTCTTGGTTCACGCTGACAAGTAGTATAGTATTATACTCTGTTGGGTGTG
TCCCAGGCCTAATTCGCACCCTCCCTCTCAAAAATATTTCCAAATACTGC
ACTTTACTATCAAATTTTTAATCATCTTGAATCAATTGGTGTTGTCCTAT
GAAAAATGTCACGGGACCACAGGCTTAGTCCCCTTACCTGCCTTTTGTTG
ATCGTGTAGTGAATATCTCTGAATTAATTTTTCCTTGTTTGTAGTATTTT
TACGGCTCAACAATAAGCTCTTCTAACTGAAGGTCTTTTTCTTGCCTTAT
CCCCTTCAGAATGGAGAGCCATCGAAGCTACAAAGAACAGTGAGCGACGG
GCCGGCAGACGTTTTGAAGAATGCAGATCATTTGCTACAACGCACTGATT
CTTTCGAATCCATTGATGAAAACAGCATGTCCAGTATTGATTTCTCCGGT
AAGTTTGAAAAGGAATCTGTTTGCTGATTTCTTTTCCTGGGGGCTTTCTC
CCTGATTTATAATAAGCAGTTATTGGACAGCAAAGAAGCCAATCAAATGT
CGCTATTTACGCGCGTCGGATAATAAACTAGAATAGACTATTAACAAAGA
AATATATTCCATGCCAATATTTTTTGTAGGTGTCAACCAATCAGAAGTTG
CGACTGACGGTTCATCTCGTCCTCCATCAGCTACTGGCAGCCCCGGTCAA
AGTCCATCGACTTCTGGTACGAAGAGAGGTCGTGGTCGCGGGCGGGGAAG
AGGAGGAAAAGCAAAGTCTGGCTCCTTAGCTAAGGCGGCTGCCTCGGTTG
CTGCAGCAGCAGGTGCAATGGCAGGGCGGGATGCAGCTTACGCCCAATAT
GGATATTCATTTCAAAAGAACTCGTAGCGTTTACTGTTTTATTTTCGACT
GTCCATTTTTAGTGTTTATTTTTTACCAAATCGATAGAGAAATTTTATAT
TTATTCGTATGATAGATGCATAGTAGGTCATCATATTGAAGATTGAAAAA
CGATGCTGCCTCATTTTTTGTTATGATTTTATTTTCTCGACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012950XLOC_012950Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023057-exon-sc0000439-1575043694:97004..97045TCONS_00023057-exon-sc0000439-1575043694:97004..97045Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:95890..95971TCONS_00023057-exon-sc0000439-1575043694:95890..95971Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:93971..94084TCONS_00023057-exon-sc0000439-1575043694:93971..94084Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:93299..93451TCONS_00023057-exon-sc0000439-1575043694:93299..93451Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:93000..93075TCONS_00023057-exon-sc0000439-1575043694:93000..93075Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:92346..92559TCONS_00023057-exon-sc0000439-1575043694:92346..92559Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:90671..90798TCONS_00023057-exon-sc0000439-1575043694:90671..90798Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:90165..90259TCONS_00023057-exon-sc0000439-1575043694:90165..90259Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:89511..89583TCONS_00023057-exon-sc0000439-1575043694:89511..89583Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:89077..89121TCONS_00023057-exon-sc0000439-1575043694:89077..89121Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:88498..88611TCONS_00023057-exon-sc0000439-1575043694:88498..88611Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:88132..88234TCONS_00023057-exon-sc0000439-1575043694:88132..88234Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:87755..87840TCONS_00023057-exon-sc0000439-1575043694:87755..87840Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:85448..85586TCONS_00023057-exon-sc0000439-1575043694:85448..85586Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1575043694:84851..85266TCONS_00023057-exon-sc0000439-1575043694:84851..85266Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:97004..97045TCONS_00023057-exon-sc0000439-1510915933:97004..97045Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:95890..95971TCONS_00023057-exon-sc0000439-1510915933:95890..95971Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:93971..94084TCONS_00023057-exon-sc0000439-1510915933:93971..94084Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:93299..93451TCONS_00023057-exon-sc0000439-1510915933:93299..93451Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:93000..93075TCONS_00023057-exon-sc0000439-1510915933:93000..93075Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:92346..92559TCONS_00023057-exon-sc0000439-1510915933:92346..92559Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:90671..90798TCONS_00023057-exon-sc0000439-1510915933:90671..90798Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:90165..90259TCONS_00023057-exon-sc0000439-1510915933:90165..90259Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:89511..89583TCONS_00023057-exon-sc0000439-1510915933:89511..89583Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:89077..89121TCONS_00023057-exon-sc0000439-1510915933:89077..89121Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:88498..88611TCONS_00023057-exon-sc0000439-1510915933:88498..88611Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:88132..88234TCONS_00023057-exon-sc0000439-1510915933:88132..88234Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:87755..87840TCONS_00023057-exon-sc0000439-1510915933:87755..87840Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:85448..85586TCONS_00023057-exon-sc0000439-1510915933:85448..85586Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1510915933:84851..85266TCONS_00023057-exon-sc0000439-1510915933:84851..85266Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:97004..97045TCONS_00023057-exon-sc0000439-1491911889:97004..97045Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:95890..95971TCONS_00023057-exon-sc0000439-1491911889:95890..95971Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:93971..94084TCONS_00023057-exon-sc0000439-1491911889:93971..94084Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:93299..93451TCONS_00023057-exon-sc0000439-1491911889:93299..93451Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:93000..93075TCONS_00023057-exon-sc0000439-1491911889:93000..93075Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:92346..92559TCONS_00023057-exon-sc0000439-1491911889:92346..92559Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:90671..90798TCONS_00023057-exon-sc0000439-1491911889:90671..90798Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:90165..90259TCONS_00023057-exon-sc0000439-1491911889:90165..90259Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:89511..89583TCONS_00023057-exon-sc0000439-1491911889:89511..89583Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:89077..89121TCONS_00023057-exon-sc0000439-1491911889:89077..89121Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:88498..88611TCONS_00023057-exon-sc0000439-1491911889:88498..88611Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:88132..88234TCONS_00023057-exon-sc0000439-1491911889:88132..88234Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:87755..87840TCONS_00023057-exon-sc0000439-1491911889:87755..87840Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:85448..85586TCONS_00023057-exon-sc0000439-1491911889:85448..85586Clytia hemisphaericaexon
TCONS_00023057-exon-sc0000439-1491911889:84851..85266TCONS_00023057-exon-sc0000439-1491911889:84851..85266Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000439supercontigsc0000439:84851..97045 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.85904	0.37424	0.177048	0.0496971	0.0953454	0.559456	0.0922694	0.590089	3.28308	4.9801	5.27348	4.18792	5.91092	12.7666	6.15384	6.96498	6.35961	7.12583	0.18136	3.13448	5.72941	5.82865	13.4634	11.0687	0.112741	1.24382	6.24113	3.15477	10.0916	11.526
Blast
[Close]
BLAST of TCONS_00023057 vs. Swiss-Prot (Human)
Match: INO80 (DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 SV=2)

HSP 1 Score: 361.303 bits (926), Expect = 4.321e-109
Identity = 196/391 (50.13%), Postives = 257/391 (65.73%), Query Frame = 3 
Query:   54 FSFSRFINLSPKELV-LLFRSQIFRLIHSFLVLSHLQHTHTLQPFITRAEDDGSNFHNEPSQKKYLTRKDLLICSPRHHSMFNSSQ----RDFVFVRSTSTCSGFNSCKIIEVVKENSLPKCPEERHCVAVDYPMFLSSYMPKVYSPPIEVYCSDRSAAYQYKRRAF---GTDDLLEFYMHGP---CSQPTNRQLLFYPPPRQGLQALQPVNGWSRVRVPNRTALLSDSGKLLVLDQLLTRMKREGHRVLIYSQMTKMIDILEEFMNYRQHSYIRLDGSSKISDRRDMVNDFQSRDDIFAFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQKRQVTVYRLVTKGTVEEKILNRAREKSEIQNIVISGGQMKTDVLRPK 1193
            FSF RFI++SP E+  L+ +  + R +  FL L      H L+ +      +G       S ++YL  KD L+      S  N       +  VF       SG++     +VV +         R C+  + P FL    P+V + P++ YC+DRSA  +Y+RR     G+    +  ++G     +   NR+  F+P P  GL +++P NGWS +R+P + +L++DSGKL  LD LLTR+K +GHRVLIYSQMT+MID+LEE+M YR+H+Y+RLDGSSKIS+RRDMV DFQ+R+DIF FLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ +QVTVYRL+ KGT+EE+IL RA+EKSEIQ +VISGG  K D L+PK
Sbjct:  888 FSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSW---GAPEGE------SHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSD----QVVHQRR-SATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSA--EYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPK 1262
The following BLAST results are available for this feature:
BLAST of TCONS_00023057 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INO804.321e-10950.13DNA helicase INO80 OS=Homo sapiens GN=INO80 PE=1 S... [more]
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