TCONS_00022765 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022765
Unique NameTCONS_00022765
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1669

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022765 ID=TCONS_00022765|Name=TCONS_00022765|organism=Clytia hemisphaerica|type=transcript|length=1669bp
CACATGGTATGAGTTGACCTGTGTACAGGCAAATTCTGTTTTATTTAGTT
TgaactatttttcatttttatcgacACCATTCTGATAGATTCTGAAATGT
ATTTTGAATTatgtttttttagaatcaaGCTGAGGCAGAATTGGTCGGAC
ATTACCCTGGTCATGGCAGACTAGAATTCACCACCAATTTGGATATCATT
GATCCAACTTTATTTAAACAAATACCTGTATATCAAATCCTTGACACAAA
TGGAAATCTGATTGGTGACCCAAGTGAAGTCCAGCTTTCTGAAGAAACGC
TATTGAAAATCTACGAAAAAATGTTGACCTTGAATCAAATGGACAAGATT
CTGTATGAGTCACAAAGACAGGGTCGAATTTCATTCTACATGACATGTTA
TGGTGAAGAAGCCACACATTTTGGAACAGCAACAGCTCTTGACTTCAATG
ATTTGGTTTTTGCTCAATACAGAGAAGCCGGAGTGTTGATGTGGAGAGGT
TTTACACTGGACAATTTCATGAACCAATGTTATGGTAACGAATACGATGA
AGGAAAAGGCCGACAAATGCCTGTCCATTATGGCTCCAATAGACTCAATT
TCGTCACTATCTCCTCACCACTGGGCACACAAATGCCTCAAGCTTCGGGT
GCAGCTTACGCCATGAAAATGAAGGGAGCCAACAACTGCGTGATATGTTA
TTTTGGTGAGGGCGCTGCAAGTGAAGGAGACGCCCATGCCGCCTTCAATT
TCGCCGCCACTCTTGACTGTCCCGTTATTTTCTTCTGCCGAAACAACGGA
TACGCCATTTCGACCCCTGCTAACGAACAATACCGAGGCGACGGCTTAGT
ATCACGCGCACCATCATACGGTATGGCTGCATTACGGGTGGACGGAAATG
ACATCCTTGCTGTTCACAATGCAACTAAAAAGGCTAGAGAAATCGCCATC
ACTAAAAATCGACCCGTGATCGTTGAAGCTATGACCTACAGAGTTGGACA
CCACAGTACAAGTGATGATTCATCGGCTTACAGATCAGCTCATGAGTTGA
AATATTGGAAGGAAGTCGACTCTCCTATCAACCGCTTAAGAGCGTTTTTA
GAGAACAAAGGACTGTGGAACGAAGAAGCTGAAACAGCAGCCAAGAAATC
GATCATGAAAGATATTATGGCCGCGTTTGGTCGCGCGGAGAAAGCTAAGA
AGCCGCCCATTTCTGATATGTTTACAGATGTTTACGACGAAAAGCCGGAA
CGATTGCAAAAACAATACGACGAACTTTTGGAACATATTCAAAAATATCC
GGACCAATACCCGACCGGTCAATTCCAATCTTAATTCCCGGGCTTGGATT
TTagtctttttatttctttcattaTCAGATTTCtataaagtcaatttttt
tggaaagctcaaaaacaaaacactAAACATTATCTACCACCATTAGTTAG
TATATCACAATGCGTCAACACAATGCGTAACACACGTCACCGTTTTCAAT
TCGATTCTTTCATTTCAAAGATTTGAGTTTCACAATAATCCCGGGGgcgg
ggggtacttaggcaaaaatggatgatgggtatgtgcggacggtaagggtc
ggtttttttcacctgtcaaagtctctctaagggtcggaaaaatcagaaag
ttttaaattagtctctcta
Run BLAST on NCBI

protein sequence of TCONS_00022765-protein

>TCONS_00022765-protein ID=TCONS_00022765-protein|Name=TCONS_00022765-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MLTLNQMDKILYESQRQGRISFYMTCYGEEATHFGTATALDFNDLVFAQY
REAGVLMWRGFTLDNFMNQCYGNEYDEGKGRQMPVHYGSNRLNFVTISSP
LGTQMPQASGAAYAMKMKGANNCVICYFGEGAASEGDAHAAFNFAATLDC
PVIFFCRNNGYAISTPANEQYRGDGLVSRAPSYGMAALRVDGNDILAVHN
ATKKAREIAITKNRPVIVEAMTYRVGHHSTSDDSSAYRSAHELKYWKEVD
SPINRLRAFLENKGLWNEEAETAAKKSIMKDIMAAFGRAEKAKKPPISDM
FTDVYDEKPERLQKQYDELLEHIQKYPDQYPTGQFQS
Run BLAST on NCBI

transcript from alignment at sc0000432:110018..120306+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022765 ID=TCONS_00022765|Name=TCONS_00022765|organism=Clytia hemisphaerica|type=transcript|length=10289bp|location=Sequence derived from alignment at sc0000432:110018..120306+ (Clytia hemisphaerica)
CACATGGTATGAGTTGACCTGTGTACAGGCAAATTCTGTTTTATTTAGTT
TgaactatttttcatttttatcgacACCATTCTGATAGATTCTGAAATGT
ATTTTGAATTatgtttttttagaatcaaGCTGAGGCAGAATTGGTCGGAC
ATTACCCTGGTCATGGCAGACTAGAATTCACCACCAATTTGGATATCATT
GATCCAACTTTATTTAAACAAATACCTGTATATCAAATCCTTGACACAAA
TGGAAATCTGATTGGTGACCCAAGTGAAGTCCAGGTAAATCTTTTTTCTT
GTTAACTTTTTAGCTCAAACCTTTATTCAGTGTGATTTATATTGGGGTAC
TAGTTCAATCTTCCTCtcttaaatctttaaaatttggtTTCAGCTTTCTG
AAGAAACGCTATTGAAAATCTACGAAAAAATGTTGACCTTGAATCAAATG
GACAAGATTCTGTATGAGTCACAAAGACAGGTATGtgaaaaaatcttctt
tgaaaatCATTGTTGTTGTTAAACTGTCAGAATCCATACTGATTCAAAGG
GTTCAAATGATTTAAATTTCTGAACGTTAAAGGTTCAACTCAAGAAGTGT
CAGATTTCACAAACAGATTTGGCCTTAGCCTTACGGATTAATTACGTTAG
CTCAATCAGTGATTGTTTGAAGAAAATACTGTTAATTCTTTCCAGGGTCG
AATTTCATTCTACATGACATGTTATGGTGAAGAAGCCACACATTTTGGAA
CAGCAACAGCTCTTGACTTCAATGATTTGGTTTTTGCTCAATACAGAGAA
GCCGGTAAGTTTTTATCCTTTGTCATTGTGATGATGTTTTTTCATATTTG
GGTACACTAGGTGGTATTTGCACCTATAACTGAGGTAATTTTAATCAACC
CAAGTATCTAAAGCTAAAGGCTGTATTGTAAATCTATGGTGAAAGGTACT
TTTTATAGATCTATGATTTTCCATCTCATCTTCACCTTTAGGAGTGTTGA
TGTGGAGAGGTTTTACACTGGACAATTTCATGAACCAATGTTATGGTAAC
GAATACGATGAAGGAAAAGGCCGACAAATGCCTGTCCATTATGGCTCCAA
TAGACTCAATTTCGTCACTATCTCCTCACCACTGGGCACACAAATGCCTC
AAGGTGATCTTTTTACTTGACAAGTTCTTAAATGTTCGAGGAGATATAAA
CTCCAGGAGTATATGATAATTTGCAATATCCTTGGGAAAGTTCATGGTTT
CCAGGGATAAATGTTTTTATCTATAGACCCCTTTGATGATTGTTTAAATG
TGAAATCTATTGTACAGGACATAAACAATTGCAATGTGCAGTGCCAGTGG
TATATCGTTAAAATAATATCCTTAACCCCTCTGCATattccttttttctg
aaagagcccGATTTGGCATAGTTTGTATTACAAATGTGAATTCAGGTTTT
GTCGTGTTACCTATGCTTTGCTATGCTTTGAATGTTCAAGGGCAAGAAAA
GTTAATAAAAGGTTTTGTTAGAGCTCCTTGTCAAGGTCAATTGGTTCtgt
ttttaatttctgccaaAGAAAATCGGTGGTCTTAGATGATAGGGCAAGGT
TTGTTTCAAATAATAAGCTTGATATCATTGATAATGCTTGCTTGTTTCtc
ttgaaaacttgaaatttttatgaCGTGACGAAAGGAGAGTGAAGAGTACA
AGCTCACCTTCCAAGTTTTTTTTCCCGAACAAACATTTCAGTGGGTTTAC
ACCGAGCGGTAAGAATACCATGCTGTCAAGGGACAAATTATCATTGACAG
TATTGATGGTATTAAAAAgattactttttttttctcgtCAAAATGACGTA
ACATAGTGAAAAATCACTTAATTTCATAATAGCTTGTTGGCTTTAAAACG
CATTTATGAGAGTAGCGTGTGCATGTAAGGGGAATACCTTGCTCCAATGA
ATTGTTCACACAGAAAGACGCTAAGATTAAATTTCCTTGACAACTTACAT
GTCTCTACAAGTCAATaaactttttatattttgttattaGAACTTGCTCA
GAAATCCTATACTAACAGAACAGGATCACTTTTTTATTCCAGTCTTTGAA
AATGACTCATTTCGTACCGCAGAACAGATAGTAGAACCGATGATTGTGAA
TTTTCGAGATTCTCTGACACGAATTTAAAAATTCTGAATAATGTAATAAT
GTGTTTATTATTTTTgattgaatgttcttataaaaagttctGTCTATTTC
TTATTGAAGAGTTTTCTTTTTAATCGGTTAACCACATGTAAGCTTTTGCT
TAACATTCCCTTAAAAGGTACAAAGTTATCATCATTATAGTAGAAACTGA
TATGTTGATAAAAACAACTACTCTCATTAATGCATCATGTTAGTCTTCAA
ACACGGAATCGAAAACTTACTTCTTAATcgactttcactttcacttttaa
cCGAAACTAGTGCTTTATTATTTTCCTTGTTCATTCTTAGAACTGTTCTA
AAAGTTACGATTTCTCTAGAATGCAAGCactacactcattttgttttata
agcataacgtttataagcatactgaagctcaaatttccagaaaaatttag
catatgctaagcataccaaagaaatttttagaatcataatttccaaaact
ttagaaaataacagaagaaagaatcatatatcatatcatatatggtaaac
attcgaaaacaatagaatgtcttcatttctctCAAGATTAAAGAGAGGCG
AAAATGCGCGAAAaacttacccccccccccttcataatttttttaccaag
catagggttaagcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGactatcctctttct
aataaaaatggttttgagtctaaacaagactttgttcggcctcagtggct
cgccaaacgtccaaagttttttctgccgCACCCGGTATGCTTATAAAGCA
AAATGAGTAATCTAACAACAATTATCTTTTTGTCTTATTAGCATCACACC
GGGTGGATTTTATAcacatttgaagatttttgcacaaatactatttaaag
ggacattacagtagtaaaatgtaaacattgcgcgaaccacgtgtcattaa
agagaacaattaaaatcacgtgtccaaaacaaacttgtaaaacaNNNNNN
NNNNNNNNNNNNNNNNgtcaaaattagccatatttggtttgattttttat
tttgatatgtgacatttgttttgattttgtatccgctgcatacagtttgt
ttacaaattttgcaagtactgttatgtccctttaagtgaTTTGAGACAAA
TTCAGAGAATAAGAGGATTTACCAGGACCTTCTCTGGCTCATTTGAGCTT
GTCTCGTTCTAGCAAGTGAAAGTGTCCAAGAGCGATAAGATCGATACAAT
TATTCTCATTACATTTGGCCAAGATTCTCCTTctctaaacaaagaaaaat
gcaTCGAGGAGAGTGATTATCGGACTATTTCCTGGGCTGTTTGTACAAAG
ATAtcactgaaaaagaaattaccGCCTGATTACGGTTTAAATACTTGAAA
CGCGAGTTTTATCAAAGCTCGCAACTTCGTTAACACAAAACTACTTCTTG
TGTACTATTTACTATTCTTAGTCTCACGAATCCGACACTTTTGGTCTAAT
GAATCATTATAACCATTCTTTCAAGAATGTCGTTTTTGTTATACCTAATA
AGGTAAATTGCATTAGGCAAATCATAATTCCGTCGTAAAAGGTCTTCTAT
CTATCATTCTTAgttgttgaaatttgagaaagttttttgaaaagacaCTG
GTATGGGATATCAGATCCCTTTGTTTGAGAAATTCCCAGCATTTGTTATC
GGATTTGTTCGTTACAGAAAACCAAACTTCCACAAGGAAATTCCTGTTGT
CAGGGCGACGAGATTGAATTGCTGTTTCTTAATCGTTTTCATGACAAGCA
CACCGGCTCTTGAGTATATGATTTATGAATCGCTCTCTTGTCACGAGATA
TAATATAACTAAGATTATGTGACTATATCTTACTTGATTAGTAATTCATT
GATTGACTGATACCTCGTTAATTAATGACACTAATTACAGCTAATTATGT
TCTTTTGAATCAATTTTACagaaaagcttttttgtcccTGATCGAAAAAG
ATTAGTCATAATGCTATGTGTTTTAGATCAAATTGTTCCCTGCTTTATCA
GGAAGTGTACAATATTCTATTCATGTCAATGTTCTGTAGTCTTGACTAGT
CTTTATCTTATcactattttttgtaaaaagcaCGCCTGCAAAGGGAAGGC
TCCCTTACTCGAAAGTTCTCATGTTGCACGCAGTAAAAGAATTCCCTAAC
TAACCACGAACAGTCAGCTTTATGAACACAATTGTttatttagatatttc
aaaacaaacatatCTTTACGGTAGACTTCCTTTTATAAACTTCTGTAGTC
TTTCCAACGTCGGTAGCTACGAGAACCGTTGCATTTCCGGGGTCATAAGA
CTTCAAAGATTGGTCACTGAAGGGGCCATCGAACGTGGCCCCTGAGCTGG
ATAGGCTAGAACACGATTTCGGACCTTATGAAACCCTTTTTAGTAGCACG
AATATTTGGTTGGTAAAAAACTTtgcatatttcaaaaaaaactcaGCAAC
CTGTCGTTTTCAAGGTTTTCCTTTCAACTTTCAACCTCAAACTGGACTTG
CCTCGACAACCGATTCTTTTTGCTACCAAAAATCCTTTCTCATGCATGTA
TACTAATACTATTTCAAAAATCGGTAGGCTTCCTGCTAAATCAAGCTGCT
AGAATTCTATATTATGGTAAAGGTTATGAAAAGCAGtatttgaaactttt
aaaaaaacttttcatgatGACGAAAAACGTCGTCAATCGAGCTTGGAAGG
GTTACAAAGATCTCTGCAAAATATCTTCAATTAATAAAGTTGTTTCAGAA
AGCTTAAATTTTATGGCATTTCTAAATTCTGTTAACCCGTTCATTAAgtt
gctttcgttttcaagcgaACCATTTTAGCGAATAATGTCTCCCCATATCG
GGTAATTCCATTAGAAAGTCATGTTTCATTTCATCCAAATTATAAAACTT
CAACCTGGCTTGCAATTTTAGacttggaaaatttgaaataagctattttt
ataccgggtgacccacgaaaaagtttgGACGTtccccgacgtcttgaggc
cgaacaaatgtcccaaagtgcttggagttttgatatttagaaagtagata
tcctaacttaaaatttgagccatcactttttaaatttgaccaacttgttc
tctacttatgagcttttaaagtcaaaattcacttttcgaaaagtgtaaaa
aacacgtaaaaaagaggtattaaattcgtgcaatcaattagaaaatcact
aacaaattgacttatttaacgagttttatgacattaataattaataaaac
cacctttgaaagtagtttttgtttaaaacaagactattttttataaaaat
gggtgctttcatagatttttttcaaaaactgtatatcaaaaacgtctaaa
aataccaaatttgatatcccttttttacgtgttttttacactttccgtaa
tgtgaattttgactttaaaagctcataagcagagaacaagttggtcaaat
ttaaaaagtgatagctcaaattttaagttaggatatctactttctaNNga
aacgtctgaactttttcgtgggtcacccggtactcTTTCTGAAAGCGTTT
GGTTTAAAATGGTCAGGAGCCATAGCCAAAAGTCCAGGGCCGATAGCTGG
TAGTTTAAGAGGATTGGACAAAGCTCTATCTCACTCATTCGTGTGTTAGT
AACGTAACTCACGTTTCTGTTTCTTGTTTCAGCTTCGGGTGCAGCTTACG
CCATGAAAATGAAGGGAGCCAACAACTGCGTGATATGTTATTTTGGTGAG
GGCGCTGCAAGTGAAGGAGACGCCCATGCCGCCTTCAATTTCGCCGCCAC
TCTTGACTGTCCCGTTATTTTCTTCTGGTAATTGAACTTTTTCTGTGTCT
GTtgtatcaacttttttttgatctTGCGCAATGTCCTGGTGCAAACATAA
TCTATTAAGTAGGTGTTTTTTGCATCACTTATATTTGCATTTGACACTAA
CTTTTTGTCGAAATTCTCTcgttttcctgaaatttttacgaattttaagT
TAAGTTGTATTTTCGTGGAACTAAATCTTGGTAGACACCAAAAGCtggaa
aattagttcccgttAAAATTAGTTCCTTAAGGTAGTTTGCTTTCATCGTG
TATAAAGATCCAGTAAGAATAACCAGCTAATGTTTTGCTGAGCTCTCTTC
AAAATAGATCTGAATCTTTCTCCTTTCACACAATATTGTCTTTACATTTC
AGCCGAAACAACGGATACGCCATTTCGACCCCTGCTAACGAACAATACCG
AGGCGACGGCTTAGGTGAGTTCAGTTAcatgttaaagatattttttgtgA
TAAAGAAAGAAGGCTCATCTCATGGTGACAAAGCAGAATTATCTATGAAA
cttctcaaaattttatttctgggggggggggcagtttttctttattttat
tcgaAAATGCTGTGTAAACAAATGATAGGAGAAACGTTAAATGATGTCAT
TTTACATCAAGGGTGTCCATGCTTTCTATAGATAtttactaccttatcgg
ccctttttacgccggctcttattggcgttattttaggctcttggcgtaat
aagggccggcgctAAAAGGGCTGGtgtaaaaatggccaaaagtttgcaaa
ttttacttaaaaatggcgttaatttttgaccatttttctctatttaaaGG
ATTTTGGGTATATAattcgaagataaaaaattatccattgttttactcca
tatctaaaacttcgcaaaaataagtgattttaaatagaattttcaacagt
ttactactgaaaaatgatattttaatatAAATTGAAGCATAAGCCATtct
aacaaattttggcgttatttacggccctaattcgcgtaagcccaaaatta
ggctgtggcgtaataagggccggcgtaaaaagggccgataattCTGATGT
TGAATCTCGACAACTAGTTTTTATCACGGCTACGCAGAAACATTTTGTGC
TATCACACAGTATTTAGTCCTTGATTATCCTTAGCACGCAAATAAATAAA
CTTCCTAAAGGCTTCAAGTATAAGTATTCTCTTGGTAAATATTGAGCCTC
TGATTGTTCTTAACTTTAGGCCAAATTCCAGCGtcatgttcttatgaaat
tgtctCTGCAATGAAGTTGATTCAGTCACTTTGTAGTTGTCTTTTTACCC
GCCACCaaaaccgttggaaaaccaacggatccgtTGAGACTCGAACTAAT
AATCATGCGATTGGCGGGGATTTGTtctaccattgagctacgggtccatg
tgTAACATCAAAAACTCAATTGTCACTCAATAGAGCTGAAAATAGATTCT
TGTAGATTTACTAGCAAGAGACAGTGAAATGAAAAATCTGATTTTATTCA
CCTGATTTTAAAGGGTAAAATTCCTGattaaaattgtatattttaatTGG
ATAGTCTCTGTGTTTGTTATAAGCCATATTATTGCTCTATTAATCTGTAG
TATCACGCGCACCATCATACGGTATGGCTGCATTACGGGTGGACGGAAAT
GACATCCTTGCTGTTCACAATGCAACTAAAAAGGCTAGAGAAATCGCCAT
CACTAAAAATCGACCCGTGATCGTTGAAGCTATGACCTACAGGTGAGTTC
GTAGGTTTTGTCAACACCCTCCTTAACAATAGACGGTTCGGACCCTTTTT
TAGCTTTGGGTTTGAAATAGTTGAACACGGGTTACTTTCAtaggattaaa
tttcgtggatttcgcggatttgggtgtcatccgtgaaattaaattccaat
gggaatttggaaaggccttatccgcgaaatattttcaaacagaactaaaa
aatgtcaaataaactATTTCTtgatgtttactggcatcaatgAGGTGCTA
ATGATGCGTacttcaacaaccaacatgcatgatttgacagtaaaaggcTT
AAAATTATGACAATATTGTCTCCCAACAGTGCCATGTGCGagattaagtc
cccgcgaaatcttaaaatttcgcggatgagctcaatcGCAAAATCTAATA
ACCCCGAAATTTATCCCATCAAAGTAAACTGTATTTAGATAGAATGGATG
CCTTTTGACACCACGTGATCTATTTCTAGCCATTTGATTCGTCGAAAACA
GTACAATTTTAAACCTAATTACTTCGAGAGCCACGTCTACAAGTCAAGAC
TTTcgttttttcgatttcacaatTATTGGCAACGGTTAAAAAGCGTAGAA
AATTTTAATAAGTTTGCACAGATGTAccacaaaaatttatttcagtTCGT
TCAAGGTAATTTGTTTCTTCCAAATTTAAGCATTTTCTACGTTGGTGTGA
AAGCCTGATATTTCGAAGTATTTTTGAGTTTAGAGCTCGTTTTAATACGA
GATTTTTTTCTCGTCTCTGTAGAGTTGGACACCACAGTACAAGTGATGAT
TCATCGGCTTACAGATCAGCTCATGAGTTGAAATATTGGAAGGAAGTCGA
CTCTCCTATCAACCGCTTAAGGTAAGAAGGATAGATATATTTAAAATTTA
ACGTCTTTGATTACCCTTGAGGCCTAAAGTTGACTAGCTTTTTTCTGGTT
TGCATTACATTCGTAACACATCGTAAAGTGTTGGAAATATAATGTTATAT
TGCATTTGACAAATTTCTgaagaaacatttttgtaaGGATACACTCGTGA
GTCTCTTATTCAAAGAGGAACCGACAGCTATTTTACATTCACTAAAAGTG
TACTAATTTATTTTACCTTTACAGATACAACAATGTTTTAAACTTGCTAT
CTTTTCATAGAGCGTTTTTAGAGAACAAAGGACTGTGGAACGAAGAAGCT
GAAACAGCAGCCAAGAAATCGATCATGAAAGATATTATGGCCGCGTTTGG
TCGCGCGGAGAAAGCTAAGAAGCCGCCCATTTCTGATATGTTTACAGATG
TTTACGACGAAAAGCCGGAACGATTGCAAAAACAATACGACGAACTTTTG
GAACATATTCAAAAATATCCGGACCAATACCCGACCGGTCAATTCCAATC
TTAATTCCCGGGCTTGGATTTTagtctttttatttctttcattaTCAGAT
TTCtataaagtcaatttttttggaaagctcaaaaacaaaacactAAACAT
TATCTACCACCATTAGTTAGTATATCACAATGCGTCAACACAATGCGTAA
CACACGTCACCGTTTTCAATTCGATTCTTTCATTTCAAAGATTTGAGTTT
CACAATAATCCCGGGGgcggggggtacttaggcaaaaatggatgatgggt
atgtgcggacggtaagggtcggtttttttcacctgtcaaagtctctctaa
gggtcggaaaaatcagaaagttttaaattagtctctcta

Coding sequence (CDS) from alignment at sc0000432:110018..120306+

>TCONS_00022765 ID=TCONS_00022765|Name=TCONS_00022765|organism=Clytia hemisphaerica|type=CDS|length=8112bp|location=Sequence derived from alignment at sc0000432:110018..120306+ (Clytia hemisphaerica)
ATGTTGACCTTGAATCAAATGGACAAGATTCTGTATGAGTCACAAAGACA
GGGTCGAATTTCATTCTACATGACATGTTATGGTGAAGAAGCCACACATT
TTGGAACAGCAACAGCTCTTGACTTCAATGATTTGGTTTTTGCTCAATAC
AGAGAAGCCGGAGTGTTGATGTGGAGAGGTTTTACACTGGACAATTTCAT
GAACCAATGTTATGGTAACGAATACGATGAAGGAAAAGGCCGACAAATGC
CTGTCCATTATGGCTCCAATAGACTCAATTTCGTCACTATCTCCTCACCA
CTGGGCACACAAATGCCTCAAGCTTCGGGTGCAGCTTACGCCATGAAAAT
GAAGGGAGCCAACAACTGCGTGATATGTTATTTTGGTGAGGGCGCTGCAA
GTGAAGGAGACGCCCATGCCGCCTTCAATTTCGCCGCCACTCTTGACTGT
CCCGTTATTTTCTTCTGCCGAAACAACGGATACGCCATTTCGACCCCTGC
TAACGAACAATACCGAGGCGACGGCTTAGTATCACGCGCACCATCATACG
GTATGGCTGCATTACGGGTGGACGGAAATGACATCCTTGCTGTTCACAAT
GCAACTAAAAAGGCTAGAGAAATCGCCATCACTAAAAATCGACCCGTGAT
CGTTGAAGCTATGACCTACAGAGTTGGACACCACAGTACAAGTGATGATT
CATCGGCTTACAGATCAGCTCATGAGTTGAAATATTGGAAGGAAGTCGAC
TCTCCTATCAACCGCTTAAGAGCGTTTTTAGAGAACAAAGGACTGTGGAA
CGAAGAAGCTGAAACAGCAGCCAAGAAATCGATCATGAAAGATATTATGG
CCGCGTTTGGTCGCGCGGAGAAAGCTAAGAAGCCGCCCATTTCTGATATG
TTTACAGATGTTTACGACGAAAAGCCGGAACGATTGCAAAAACAATACGA
CGAACTTTTGGAACATATTCAAAAATATCCGGACCAATACCCGACCGGTC
AATTCCAATCTTAAATGTTGACCTTGAATCAAATGGACAAGATTCTGTAT
GAGTCACAAAGACAGGGTCGAATTTCATTCTACATGACATGTTATGGTGA
AGAAGCCACACATTTTGGAACAGCAACAGCTCTTGACTTCAATGATTTGG
TTTTTGCTCAATACAGAGAAGCCGGAGTGTTGATGTGGAGAGGTTTTACA
CTGGACAATTTCATGAACCAATGTTATGGTAACGAATACGATGAAGGAAA
AGGCCGACAAATGCCTGTCCATTATGGCTCCAATAGACTCAATTTCGTCA
CTATCTCCTCACCACTGGGCACACAAATGCCTCAAGCTTCGGGTGCAGCT
TACGCCATGAAAATGAAGGGAGCCAACAACTGCGTGATATGTTATTTTGG
TGAGGGCGCTGCAAGTGAAGGAGACGCCCATGCCGCCTTCAATTTCGCCG
CCACTCTTGACTGTCCCGTTATTTTCTTCTGCCGAAACAACGGATACGCC
ATTTCGACCCCTGCTAACGAACAATACCGAGGCGACGGCTTAGTATCACG
CGCACCATCATACGGTATGGCTGCATTACGGGTGGACGGAAATGACATCC
TTGCTGTTCACAATGCAACTAAAAAGGCTAGAGAAATCGCCATCACTAAA
AATCGACCCGTGATCGTTGAAGCTATGACCTACAGAGTTGGACACCACAG
TACAAGTGATGATTCATCGGCTTACAGATCAGCTCATGAGTTGAAATATT
GGAAGGAAGTCGACTCTCCTATCAACCGCTTAAGAGCGTTTTTAGAGAAC
AAAGGACTGTGGAACGAAGAAGCTGAAACAGCAGCCAAGAAATCGATCAT
GAAAGATATTATGGCCGCGTTTGGTCGCGCGGAGAAAGCTAAGAAGCCGC
CCATTTCTGATATGTTTACAGATGTTTACGACGAAAAGCCGGAACGATTG
CAAAAACAATACGACGAACTTTTGGAACATATTCAAAAATATCCGGACCA
ATACCCGACCGGTCAATTCCAATCTTAAATGTTGACCTTGAATCAAATGG
ACAAGATTCTGTATGAGTCACAAAGACAGGGTCGAATTTCATTCTACATG
ACATGTTATGGTGAAGAAGCCACACATTTTGGAACAGCAACAGCTCTTGA
CTTCAATGATTTGGTTTTTGCTCAATACAGAGAAGCCGGAGTGTTGATGT
GGAGAGGTTTTACACTGGACAATTTCATGAACCAATGTTATGGTAACGAA
TACGATGAAGGAAAAGGCCGACAAATGCCTGTCCATTATGGCTCCAATAG
ACTCAATTTCGTCACTATCTCCTCACCACTGGGCACACAAATGCCTCAAG
CTTCGGGTGCAGCTTACGCCATGAAAATGAAGGGAGCCAACAACTGCGTG
ATATGTTATTTTGGTGAGGGCGCTGCAAGTGAAGGAGACGCCCATGCCGC
CTTCAATTTCGCCGCCACTCTTGACTGTCCCGTTATTTTCTTCTGCCGAA
ACAACGGATACGCCATTTCGACCCCTGCTAACGAACAATACCGAGGCGAC
GGCTTAGTATCACGCGCACCATCATACGGTATGGCTGCATTACGGGTGGA
CGGAAATGACATCCTTGCTGTTCACAATGCAACTAAAAAGGCTAGAGAAA
TCGCCATCACTAAAAATCGACCCGTGATCGTTGAAGCTATGACCTACAGA
GTTGGACACCACAGTACAAGTGATGATTCATCGGCTTACAGATCAGCTCA
TGAGTTGAAATATTGGAAGGAAGTCGACTCTCCTATCAACCGCTTAAGAG
CGTTTTTAGAGAACAAAGGACTGTGGAACGAAGAAGCTGAAACAGCAGCC
AAGAAATCGATCATGAAAGATATTATGGCCGCGTTTGGTCGCGCGGAGAA
AGCTAAGAAGCCGCCCATTTCTGATATGTTTACAGATGTTTACGACGAAA
AGCCGGAACGATTGCAAAAACAATACGACGAACTTTTGGAACATATTCAA
AAATATCCGGACCAATACCCGACCGGTCAATTCCAATCTTAAATGTTGAC
CTTGAATCAAATGGACAAGATTCTGTATGAGTCACAAAGACAGGGTCGAA
TTTCATTCTACATGACATGTTATGGTGAAGAAGCCACACATTTTGGAACA
GCAACAGCTCTTGACTTCAATGATTTGGTTTTTGCTCAATACAGAGAAGC
CGGAGTGTTGATGTGGAGAGGTTTTACACTGGACAATTTCATGAACCAAT
GTTATGGTAACGAATACGATGAAGGAAAAGGCCGACAAATGCCTGTCCAT
TATGGCTCCAATAGACTCAATTTCGTCACTATCTCCTCACCACTGGGCAC
ACAAATGCCTCAAGCTTCGGGTGCAGCTTACGCCATGAAAATGAAGGGAG
CCAACAACTGCGTGATATGTTATTTTGGTGAGGGCGCTGCAAGTGAAGGA
GACGCCCATGCCGCCTTCAATTTCGCCGCCACTCTTGACTGTCCCGTTAT
TTTCTTCTGCCGAAACAACGGATACGCCATTTCGACCCCTGCTAACGAAC
AATACCGAGGCGACGGCTTAGTATCACGCGCACCATCATACGGTATGGCT
GCATTACGGGTGGACGGAAATGACATCCTTGCTGTTCACAATGCAACTAA
AAAGGCTAGAGAAATCGCCATCACTAAAAATCGACCCGTGATCGTTGAAG
CTATGACCTACAGAGTTGGACACCACAGTACAAGTGATGATTCATCGGCT
TACAGATCAGCTCATGAGTTGAAATATTGGAAGGAAGTCGACTCTCCTAT
CAACCGCTTAAGAGCGTTTTTAGAGAACAAAGGACTGTGGAACGAAGAAG
CTGAAACAGCAGCCAAGAAATCGATCATGAAAGATATTATGGCCGCGTTT
GGTCGCGCGGAGAAAGCTAAGAAGCCGCCCATTTCTGATATGTTTACAGA
TGTTTACGACGAAAAGCCGGAACGATTGCAAAAACAATACGACGAACTTT
TGGAACATATTCAAAAATATCCGGACCAATACCCGACCGGTCAATTCCAA
TCTTAAATGTTGACCTTGAATCAAATGGACAAGATTCTGTATGAGTCACA
AAGACAGGGTCGAATTTCATTCTACATGACATGTTATGGTGAAGAAGCCA
CACATTTTGGAACAGCAACAGCTCTTGACTTCAATGATTTGGTTTTTGCT
CAATACAGAGAAGCCGGAGTGTTGATGTGGAGAGGTTTTACACTGGACAA
TTTCATGAACCAATGTTATGGTAACGAATACGATGAAGGAAAAGGCCGAC
AAATGCCTGTCCATTATGGCTCCAATAGACTCAATTTCGTCACTATCTCC
TCACCACTGGGCACACAAATGCCTCAAGCTTCGGGTGCAGCTTACGCCAT
GAAAATGAAGGGAGCCAACAACTGCGTGATATGTTATTTTGGTGAGGGCG
CTGCAAGTGAAGGAGACGCCCATGCCGCCTTCAATTTCGCCGCCACTCTT
GACTGTCCCGTTATTTTCTTCTGCCGAAACAACGGATACGCCATTTCGAC
CCCTGCTAACGAACAATACCGAGGCGACGGCTTAGTATCACGCGCACCAT
CATACGGTATGGCTGCATTACGGGTGGACGGAAATGACATCCTTGCTGTT
CACAATGCAACTAAAAAGGCTAGAGAAATCGCCATCACTAAAAATCGACC
CGTGATCGTTGAAGCTATGACCTACAGAGTTGGACACCACAGTACAAGTG
ATGATTCATCGGCTTACAGATCAGCTCATGAGTTGAAATATTGGAAGGAA
GTCGACTCTCCTATCAACCGCTTAAGAGCGTTTTTAGAGAACAAAGGACT
GTGGAACGAAGAAGCTGAAACAGCAGCCAAGAAATCGATCATGAAAGATA
TTATGGCCGCGTTTGGTCGCGCGGAGAAAGCTAAGAAGCCGCCCATTTCT
GATATGTTTACAGATGTTTACGACGAAAAGCCGGAACGATTGCAAAAACA
ATACGACGAACTTTTGGAACATATTCAAAAATATCCGGACCAATACCCGA
CCGGTCAATTCCAATCTTAAATGTTGACCTTGAATCAAATGGACAAGATT
CTGTATGAGTCACAAAGACAGGGTCGAATTTCATTCTACATGACATGTTA
TGGTGAAGAAGCCACACATTTTGGAACAGCAACAGCTCTTGACTTCAATG
ATTTGGTTTTTGCTCAATACAGAGAAGCCGGAGTGTTGATGTGGAGAGGT
TTTACACTGGACAATTTCATGAACCAATGTTATGGTAACGAATACGATGA
AGGAAAAGGCCGACAAATGCCTGTCCATTATGGCTCCAATAGACTCAATT
TCGTCACTATCTCCTCACCACTGGGCACACAAATGCCTCAAGCTTCGGGT
GCAGCTTACGCCATGAAAATGAAGGGAGCCAACAACTGCGTGATATGTTA
TTTTGGTGAGGGCGCTGCAAGTGAAGGAGACGCCCATGCCGCCTTCAATT
TCGCCGCCACTCTTGACTGTCCCGTTATTTTCTTCTGCCGAAACAACGGA
TACGCCATTTCGACCCCTGCTAACGAACAATACCGAGGCGACGGCTTAGT
ATCACGCGCACCATCATACGGTATGGCTGCATTACGGGTGGACGGAAATG
ACATCCTTGCTGTTCACAATGCAACTAAAAAGGCTAGAGAAATCGCCATC
ACTAAAAATCGACCCGTGATCGTTGAAGCTATGACCTACAGAGTTGGACA
CCACAGTACAAGTGATGATTCATCGGCTTACAGATCAGCTCATGAGTTGA
AATATTGGAAGGAAGTCGACTCTCCTATCAACCGCTTAAGAGCGTTTTTA
GAGAACAAAGGACTGTGGAACGAAGAAGCTGAAACAGCAGCCAAGAAATC
GATCATGAAAGATATTATGGCCGCGTTTGGTCGCGCGGAGAAAGCTAAGA
AGCCGCCCATTTCTGATATGTTTACAGATGTTTACGACGAAAAGCCGGAA
CGATTGCAAAAACAATACGACGAACTTTTGGAACATATTCAAAAATATCC
GGACCAATACCCGACCGGTCAATTCCAATCTTAAATGTTGACCTTGAATC
AAATGGACAAGATTCTGTATGAGTCACAAAGACAGGGTCGAATTTCATTC
TACATGACATGTTATGGTGAAGAAGCCACACATTTTGGAACAGCAACAGC
TCTTGACTTCAATGATTTGGTTTTTGCTCAATACAGAGAAGCCGGAGTGT
TGATGTGGAGAGGTTTTACACTGGACAATTTCATGAACCAATGTTATGGT
AACGAATACGATGAAGGAAAAGGCCGACAAATGCCTGTCCATTATGGCTC
CAATAGACTCAATTTCGTCACTATCTCCTCACCACTGGGCACACAAATGC
CTCAAGCTTCGGGTGCAGCTTACGCCATGAAAATGAAGGGAGCCAACAAC
TGCGTGATATGTTATTTTGGTGAGGGCGCTGCAAGTGAAGGAGACGCCCA
TGCCGCCTTCAATTTCGCCGCCACTCTTGACTGTCCCGTTATTTTCTTCT
GCCGAAACAACGGATACGCCATTTCGACCCCTGCTAACGAACAATACCGA
GGCGACGGCTTAGTATCACGCGCACCATCATACGGTATGGCTGCATTACG
GGTGGACGGAAATGACATCCTTGCTGTTCACAATGCAACTAAAAAGGCTA
GAGAAATCGCCATCACTAAAAATCGACCCGTGATCGTTGAAGCTATGACC
TACAGAGTTGGACACCACAGTACAAGTGATGATTCATCGGCTTACAGATC
AGCTCATGAGTTGAAATATTGGAAGGAAGTCGACTCTCCTATCAACCGCT
TAAGAGCGTTTTTAGAGAACAAAGGACTGTGGAACGAAGAAGCTGAAACA
GCAGCCAAGAAATCGATCATGAAAGATATTATGGCCGCGTTTGGTCGCGC
GGAGAAAGCTAAGAAGCCGCCCATTTCTGATATGTTTACAGATGTTTACG
ACGAAAAGCCGGAACGATTGCAAAAACAATACGACGAACTTTTGGAACAT
ATTCAAAAATATCCGGACCAATACCCGACCGGTCAATTCCAATCTTAAAT
GTTGACCTTGAATCAAATGGACAAGATTCTGTATGAGTCACAAAGACAGG
GTCGAATTTCATTCTACATGACATGTTATGGTGAAGAAGCCACACATTTT
GGAACAGCAACAGCTCTTGACTTCAATGATTTGGTTTTTGCTCAATACAG
AGAAGCCGGAGTGTTGATGTGGAGAGGTTTTACACTGGACAATTTCATGA
ACCAATGTTATGGTAACGAATACGATGAAGGAAAAGGCCGACAAATGCCT
GTCCATTATGGCTCCAATAGACTCAATTTCGTCACTATCTCCTCACCACT
GGGCACACAAATGCCTCAAGCTTCGGGTGCAGCTTACGCCATGAAAATGA
AGGGAGCCAACAACTGCGTGATATGTTATTTTGGTGAGGGCGCTGCAAGT
GAAGGAGACGCCCATGCCGCCTTCAATTTCGCCGCCACTCTTGACTGTCC
CGTTATTTTCTTCTGCCGAAACAACGGATACGCCATTTCGACCCCTGCTA
ACGAACAATACCGAGGCGACGGCTTAGTATCACGCGCACCATCATACGGT
ATGGCTGCATTACGGGTGGACGGAAATGACATCCTTGCTGTTCACAATGC
AACTAAAAAGGCTAGAGAAATCGCCATCACTAAAAATCGACCCGTGATCG
TTGAAGCTATGACCTACAGAGTTGGACACCACAGTACAAGTGATGATTCA
TCGGCTTACAGATCAGCTCATGAGTTGAAATATTGGAAGGAAGTCGACTC
TCCTATCAACCGCTTAAGAGCGTTTTTAGAGAACAAAGGACTGTGGAACG
AAGAAGCTGAAACAGCAGCCAAGAAATCGATCATGAAAGATATTATGGCC
GCGTTTGGTCGCGCGGAGAAAGCTAAGAAGCCGCCCATTTCTGATATGTT
TACAGATGTTTACGACGAAAAGCCGGAACGATTGCAAAAACAATACGACG
AACTTTTGGAACATATTCAAAAATATCCGGACCAATACCCGACCGGTCAA
TTCCAATCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012784XLOC_012784Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022765-exon-sc0000432-1491911889:110018..110301TCONS_00022765-exon-sc0000432-1491911889:110018..110301Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:110018..110301TCONS_00022765-exon-sc0000432-1510915933:110018..110301Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:110018..110301TCONS_00022765-exon-sc0000432-1575043694:110018..110301Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:110411..110497TCONS_00022765-exon-sc0000432-1491911889:110411..110497Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:110411..110497TCONS_00022765-exon-sc0000432-1510915933:110411..110497Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:110411..110497TCONS_00022765-exon-sc0000432-1575043694:110411..110497Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:110713..110821TCONS_00022765-exon-sc0000432-1491911889:110713..110821Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:110713..110821TCONS_00022765-exon-sc0000432-1510915933:110713..110821Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:110713..110821TCONS_00022765-exon-sc0000432-1575043694:110713..110821Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:111009..111170TCONS_00022765-exon-sc0000432-1491911889:111009..111170Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:111009..111170TCONS_00022765-exon-sc0000432-1510915933:111009..111170Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:111009..111170TCONS_00022765-exon-sc0000432-1575043694:111009..111170Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:116650..116794TCONS_00022765-exon-sc0000432-1491911889:116650..116794Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:116650..116794TCONS_00022765-exon-sc0000432-1510915933:116650..116794Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:116650..116794TCONS_00022765-exon-sc0000432-1575043694:116650..116794Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:117170..117231TCONS_00022765-exon-sc0000432-1491911889:117170..117231Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:117170..117231TCONS_00022765-exon-sc0000432-1510915933:117170..117231Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:117170..117231TCONS_00022765-exon-sc0000432-1575043694:117170..117231Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:118418..118559TCONS_00022765-exon-sc0000432-1491911889:118418..118559Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:118418..118559TCONS_00022765-exon-sc0000432-1510915933:118418..118559Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:118418..118559TCONS_00022765-exon-sc0000432-1575043694:118418..118559Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:119340..119438TCONS_00022765-exon-sc0000432-1491911889:119340..119438Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:119340..119438TCONS_00022765-exon-sc0000432-1510915933:119340..119438Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:119340..119438TCONS_00022765-exon-sc0000432-1575043694:119340..119438Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1491911889:119728..120306TCONS_00022765-exon-sc0000432-1491911889:119728..120306Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1510915933:119728..120306TCONS_00022765-exon-sc0000432-1510915933:119728..120306Clytia hemisphaericaexon
TCONS_00022765-exon-sc0000432-1575043694:119728..120306TCONS_00022765-exon-sc0000432-1575043694:119728..120306Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022765-proteinTCONS_00022765-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000432supercontigsc0000432:110018..120306 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
112.831	111.833	167.847	168.58	137.103	108.615	102.399	113.05	74.7437	91.9909	61.4446	59.1785	37.0545	37.3168	45.3727	55.0818	78.429	67.4636	14.4655	22.0646	46.1133	49.4844	68.4107	71.527	46.946	53.4459	75.2923	58.0429	53.5558	49.3756
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001017DH_E1
IPR029061THDP-binding
Vocabulary: Molecular Function
TermDefinition
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Blast
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BLAST of TCONS_00022765 vs. Swiss-Prot (Human)
Match: ODBA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2)

HSP 1 Score: 489.96 bits (1260), Expect = 1.586e-168
Identity = 233/392 (59.44%), Postives = 290/392 (73.98%), Query Frame = 3 
Query:  150 HYPGHGRLEFTTNLDIIDPTLFKQIPVYQILDTNGNLIGDPSEVQLSEETLLKIYEKMLTLNQMDKILYESQRQGRISFYMTCYGEEATHFGTATALDFNDLVFAQYREAGVLMWRGFTLDNFMNQCYGNEYDEGKGRQMPVHYGSNRLNFVTISSPLGTQMPQASGAAYAMKMKGANNCVICYFGEGAASEGDAHAAFNFAATLDCPVIFFCRNNGYAISTPANEQYRGDGLVSRAPSYGMAALRVDGNDILAVHNATKKAREIAITKNRPVIVEAMTYRVGHHSTSDDSSAYRSAHELKYWKEVDSPINRLRAFLENKGLWNEEAETAAKKSIMKDIMAAFGRAEKAKKPPISDMFTDVYDEKPERLQKQYDELLEHIQKYPDQYPTGQF 1325
             +PG    EF   L+ I P +   IP+Y+++D  G +I    +  L +E +LK+Y+ M  LN MD+ILYESQRQGRISFYMT YGEE TH G+A ALD  DLVF QYREAGVLM+R + L+ FM QCYGN  D GKGRQMPVHYG    +FVTISSPL TQ+PQA GAAYA K   AN  VICYFGEGAASEGDAHA FNFAATL+CP+IFFCRNNGYAISTP +EQYRGDG+ +R P YG+ ++RVDGND+ AV+NATK+AR  A+ +N+P ++EAMTYR+GHHSTSDDSSAYRS  E+ YW + D PI+RLR +L ++G W+EE E A +K   + +M AF +AE+  KP  + +F+DVY E P +L+KQ + L  H+Q Y + YP   F
Sbjct:   53 QFPG-ASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHF 443
The following BLAST results are available for this feature:
BLAST of TCONS_00022765 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODBA1.586e-16859.442-oxoisovalerate dehydrogenase subunit alpha, mito... [more]
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