TCONS_00022667 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022667
Unique NameTCONS_00022667
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2089

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022667 ID=TCONS_00022667|Name=TCONS_00022667|organism=Clytia hemisphaerica|type=transcript|length=2089bp
tataaacataaacataaatttTTATAATCACAACATACGTAAACAAGCAA
GACATCTTCGAGAAACGGAAGTAAATTGGGCATAAGTTGTTCTTATTATT
TctcgatttttcttttttcaattatgGTTGTGCTAATTGAAAGTTCAACA
ACGTATGTTTTTCAAAGTGAAGGTTTTAGcgTCAAGATCTCAGTCAAACA
ACCAGCGGCTGAGCCTCTCAAACGAAAAGTACCTCCACCCGTCGCCGCCA
AGCCTGCCAAAGTTTATTCACCTGCATCCGCTGAATTGAGAACGCCAACT
GAAGATTTCCAGCCACCGCCAATCTTTGACGATGAAGTGCCTCCCGCCAC
TAACGGGTCTGCAGATTCCGCCCTCGATGATGAACTTGATATGCTGACCA
GTATGTTATCACTTGGTCTACAAAATACACACCACCCTGACTTCTTTGGC
GTTTGTTATAAATGTCGAGATACGATTATCGGTGAAGGAAAAGGATGCAC
AGCCATGGGAAACCAATACCACGTGTTGTGTTTCTTATGTAAAGAATGTG
aaaagcGATTGACAGGATTGGAATTTTACTGTCTAAACGATAACCCACTT
TGTGAACAATGTTATACGAATACACTGGAAGACTGCGTTGTTTGCGACCA
GAAAATTACGGAACGTATTTTGAAAGCTGTCGGCAAATCATACCATCCTC
AATGTTTTAAATGTACGAATTGTAGTAAGAAGTTAGACGGGGTGCCATTC
ACATTGGACAGCGCAAACAGAGTTCACTGCGTGGAATGTTATCAAGTAAA
ATTCTCACCGAAATGTGCGGCGTGCAGCGAACTCATCATGCCGACAAACG
ATCGAGGAGAGACAGTACACATTGTTTCCATGCAAAAGAATTTTCACGTA
CATTGCTATAAATGCGAGGATTGTGGTATCTTACTATCGAACGAAGAAGG
GCGTGGTTGTTTCCCTATTGGTGATCATCTACTTTGTCAAAGGTGTAATG
GAAAGCGAATGGCTAATACTACTGAATTATAGATCGTACATACAAGCTGT
AAATCTGAAAGAAATAATTATGTCGATCTTTAATTGTCACATATACGGGT
TTCGAATTCAAATTAGTTTCGGTTTTGATCATGTACAATATGCACGGAAA
TATATCAAGTAGAGAATCTCCAACCTCCTTCCCTGCGTATTAACAACTTT
TTTATTCTTACTGATAACGCCTGATATTCTCTATGGCGTACATCAGTATC
GTAAaaaaagcctggaatacacgagGACGAGGTTGAACAATCTCCGATTA
GCTAAAATGTGCACATTGGTATATTATCTAACCAATGAGTTTATTTGCTA
GGTATTTTTCGTGTAAATTACACGGAGAATCAAGACAGGCTAATTTGAAA
TCCTCAAATTCAGTTGGTCACATCGAAACTTCCATaaaaaattccctttt
gtcTTTTCTATAGTATGTTTGTAGGTGTTTGTagcacttttatttttttc
tcgcATATATTGTACatacaattataatttttacattaaacttttttgta
cctaaaatctttatttcttttaaatattgTGTCACTTCATCTATGCCCAT
ACATGGCCTCTTATAGTATAGTTTATACTTAGCGTGttctcaattttatt
tattCTAGAACCCCGGATTCATCATAGTTTTCAGACTTTCAACTCCCCTG
GATCTTAGGATATTAAGGAGGTCAATTGGTTTACTTTTTTTGAATGGCTA
AGGATTCCAATAGGATTCTAGCTCGTTGGACTTCTTTCTTTGTTATGCAC
CAAATTTCTGTTTCTACATTACTGTTTGttgttttattgtttcaaaaatc
tttatttttaatgtattttatTAACTAAACTTAAATATTGATATTCTAAA
AAGATatgatttaactttttttataactttGTAAAAGTGACTGACTCCGC
TCTTTTAGTTTTTGACTGACTCAAAATACTCCAACCAAACTCGTGATCTT
TTACACaatacttaagggctctgaccatagtgaatttttaacatttgcca
cttacaaaatataaatttctacttgatgtagcacacaaa
Run BLAST on NCBI

transcript from alignment at sc0000430:262496..270532-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022667 ID=TCONS_00022667|Name=TCONS_00022667|organism=Clytia hemisphaerica|type=transcript|length=8037bp|location=Sequence derived from alignment at sc0000430:262496..270532- (Clytia hemisphaerica)
TATAAACATAAACATAAATTTTTATAATCACAACATACGTAAACAAGCAA
GACATCTTCGAGAAACGGAAGTAAATTGGGCATAAGTTGTTCTTATTATT
TCTCGATTTTTCTTTTTTCAATTATGGTTGTGCTAATTGAAAGTTCAACA
ACGTATGTTTTTCAAAGTGAAGGTTTTAGGTTTGTTATAATTACTACTTT
GTTGACTTTTAAGGGCTTGATGTAGTTTTCTTCAGAAACTCTGAGAATAT
TAATTTTGTAAAATTAAGTTATTTCAATATTAAGACGATAGGTCGATTAG
TCAAGTAACTTAAAATTGACTTCCAAAAGTCAAACAAGGGCAATCTTTTG
TAAATTTATAATAGATTCTACAATTATTATAACGTAACAAAGTTCTAGGT
GCACGAGGGCCTCTGGAACTGATCGTGATTGTTAGCATTTTTCGGTTTCA
TTTTAAGGCAAAAAGTGCACACTGCCCAAACACAACTGACGAAGTTTTCT
TTAATTCAGACAATTATCTTCTCTCTGAGACAGACAGTTATATAACTTTT
ATCCCTTTCCTCATATTGCAGTGGTATCCTCTGAGAGAGAGAACTCTATG
ATCCACCCTTTATTTAATGTAAAATTGTATTTATTTTCTTCTTTCTTAGC
GTCAAGATCTCAGTCAAACAACCAGCGGCTGAGCCTCTCAAACGAAAAGT
ACCTCCACCCGTCGCCGCCAAGCCTGCCAAAGTTTATTCACCTGCATCCG
CTGAATTGAGAACGCCAACTGAAGATTTCCAGCCACCGCCAATCTTTGAC
GATGAAGTGCCTCCCGCCACTAACGGGTCTGCAGATTCCGCCCTCGATGA
TGAACTTGATATGCTGACCAGTATGTTATCACTTGGTCTACAAAATACAC
ACCACCCTGACTTCTTTGGTAAGTTGGTAATCAAAAAGTTTTGTCTATTA
CTCTGATTCGAATTTGATTAATTTAAGCCAAGCGTATGAGAGAATGAACA
GGATTACATTTAATCTCAAGAATATCCGATGTGATTCTTGTTGTAAAACT
TCGCAAGGAGTAGGACCCATTCATTCCCCAGACAGTGGGGAGGGCGTCTA
AATGGCGTCTCCTTTTTAAAGCTCGTCTCATTCTTCTGTTCTATCATAGG
CGTTTGTTATAAATGTCGAGATACGATTATCGGTGAAGGAAAAGGATGCA
CAGCCATGGGAAACCAATACCACGTGTTGTGTTTCTTATGTAAAGAATGT
GGTAAGTCGTTTTCATTTCTCTCAAAAAGCAAATAATGGAATGAAGATAC
CGGGTGTTCCAGAAGAAAGTCCCCCTCTTTGAAGTGAAATTTCCTGAGTT
CTATGAACTGTTAAAGAATCGATCCTTTTGCATTGGAAAGAGGAAGGATA
AACTTAAATTTTGAGAGTTTATTTGTCAAATTTGGTCTACTACATTAAAA
GTTATGGCCTAAATGCTAAAATATTGCTTTTCAAAAAAGTCAAAAAAAAG
GCGAAAAAAGAGGATAGGAAAGTATTCATATTGGTTTTAGAATGTTTCAG
AGCAAGGATCCCGAGCGGTTCTGTTCAGATTAAAATAATGGAGCGAAATC
GTTTCGGTCTGTTTGATTTGTAACGTCTTCTTTTTCGACGTTTAAAATGT
GGAATCGTCTTGTTTTCGGAACGATGTGGAGCCGTAGTGTCTGGACATGG
TCAAAGTCTTGTTCTTAGTATACCAATACCTTTTAAGAAAGGAAAACATT
TACCTATTTATTAAGTCTAGTTCACAGAATCAACCATTTGGTTGACTATA
CTATGTCTTTTTATCAAAATAAAATGTCGTTAACATGCCTACACAGTACA
ATGCTCCAAGATTTCCTATGCAAGGAGTTTGGCACTCCTTCCTTTATATA
CTGAATTGAATATGATAAAAAATTAGAAATGTTTTATAAAATTGCTAAGT
AGGAAAGAATGTTTTTCAAATTTTATCAAGTTTTTGTTCTTTTTGTTCGA
ACTAATTTTTCACAGGTTTGCTTGCTTGTTGTGCTAAAACTTAAATGGTG
AACTATTTCATTTCATTTTAAGGACTTACTGTTTGGGAGAAAGATGTTTT
ATTTGACTTGGTGATGTATCTTTCTTTACTTGCTTATCGACATTATTAGA
GTTGCTAGTTCTTTGATGTTCAGCAGTTTTCTTTTGCGGATCACCAAAGC
TTTATGAAACCTCTTAGGATCTACCAAACTTTTATACTCTTATATAAATT
TTTTTTACAATAAGTATAGCTATACTTTTTGGGACTTGATGTGTTTAAAT
TTTTATGTGGGTCGAATAGTCAGATAATGTCAACATCGGTCTCCTAGTTT
CGTTCGAGTTTCAAGGACACCATGACTTGGCAACACGCGTCAGTAGAAAC
GCGATGTATTGTGGGTATATCTAGCCAGATGATTTATGGGACTTTCTGAA
GATAACTGTGTTTCTTCATTTAAAAGTGGGCGGTTTTCAATTTTCCATCG
CGAAGCTTCTTATTTACTTCTTCTCTTTTACATCTCCCTTCAAAACAGTG
AGATTAAAATTAATCAATATCTGATTTCTCAAAATTCTTCCCTCCTATAT
TTTTCGATTTATTCAAAAAAATTGAAAAGTTTTTTTTCTCACGAAGAACA
ACGATCTCTATTTGGTCTGTTGAGACAAAATTTTTTTCAAAGTTTGAGTC
TTTTATAACGCTCTGAATCTTTTCATCTATCTTAAATATCAAGCTGTACT
AGACTAGACCATGCCTTATCCTCTGACAGTAGAACTAGCGTTGGTTCTTT
TTATCTATCTTAAATATCAAGCTGTACTGTACTAGACCAAGGCTAACCTT
TGATAGAAGAGCTGTAGGATAATTGCTAAACTTGACAGAAAGTATTCAGG
CTAGATTTCGTCTCAATCCCTTTCTCTAATAATTTGGCCAGATAAATTCT
AAAGATAGCTTTTTCTGGAAATAAAGAGACATGGGTGTACATCGAATTTT
TCACGGATGGATCAATTGAGGGTGATATTTCGTGCAGCTGTCATCAACTG
TCAAATTTGGATCTATGCATATTACGTGTCACCAAATGTGTCAGGTTTGC
ATTTTGGTAGCATGTATTTTTTTGTTTGCAATGCAACAAATACATTTGTA
TACAAAAATCGTTGTTGATAGATTTGTTATGTAAGCAATTATTGAAACTT
AGGGTTTCTGTATTTGTAAGAGTTTTATGTAGGGATTATTTAAGTTGTTT
GTTTAGCTTTTATTGGCTGGTTTTTGAGAGGTTTGAAATTATTGCTAGTT
TCGATCTTTGGAATTACTGAAGACTGTAAAAAAATTATATTCCAAAAACA
GAGTATGGTGTGAGATGTGTGCAACATTTGCATTTCTTTTGTTTATCTTG
TGAGGGTTACGTAAAATATATTACAATGTCAATATTAAAAGAAGTACATA
TTTTTAATTTTCAGTTTTCAGGTCAAAGCAAGTGGGATATTGAGTTACTT
AGAAATTCCTTCTTTTTTTTTGCACTCCGTCGGTTTTGAAACATTTTATA
GATTCAAGAAATTGATTGGATAAACAGGGTCGGGAGTGTAAATAATTTTT
CAATCAGTACTTTCATTTTTCTAGAGAGGCTAGTGTTAATTGATTGAACG
TTGACTTGAATTAAAAGTTACTTAAGAAATAGAAGGACAAAAACAGAGAA
GAAATTTTTAGTTGAAAAATTGGTTTAAGCAATTTTTTGAGCTTTTAATC
GTGTTTGTTTTCTTTTCAATCTCCACAAAACGTGGTCACCTCATTATTCT
TGAAAATATCCACGAAGAAGTTTTTATTTAGTATTTACGGTCTGTGGATT
ATTGTTCTGGGGTTTAGACATTATTCTATGTCCACTACATAGTATAATTT
TTTCGACCTTCTTGTTTTTGGGTATTGTAATGCTTCACGGATTTCTAAAT
AGTATTCAGTTACTTTAAAGTGAAAATGATAAATAAATTATAAAGACTCT
ATCTACATTTCACAAAAATGCCACCGCAAAAAGTTATTGTTAAGGCACGG
TACACATTTCCCTCAATTAGTAAGTATCTACCCTGATCTACCATATTGGA
GTATTTTCATTCGAAAATCTTTTTGGTTTAGCTTTGTTGCGATGGGGGAA
GGATGCTCATTTTTTCAACGAGACTGAGTTTTTACCAACTAAGGATCTTC
TTTAGGCGTACAAACTTTCGCGAGCAGAAAATTTCGCGAACCGCCTCCTT
AAGAATATTCAAAGACATTTACTTTCGTGAAAAAGGCCATAATTCGCGAA
AATATCGCGAAAGTTTTCGTTCGCGAAAGTTTTTACCCCAAAGCAACGTC
TTGTTAGGGATCGATAATTTTGTTAATTGAGTATCTTGAAGGAGAAAAGG
GAAATCTTTTAAGTAGACCTTAATGGAGTTGGAGTATTTTCATTCGAAAA
TCTTTTTGGTTTAGCTTTGTTGCGATGGGGGAAGGATGCTCATTTTTTCA
ACGAGACTGAGTTTTTACCAACTAAGGATCTTCTTTAGGCGTACAAACTT
TCGCGAGCAGAAAATTTCGCGAACCGCCTCCTTAAGAATATTCAAAGACA
TTTACTTTCGTGAAAAAGGCCATAATTCGCGAAAATATCGCGAAAGTTTT
CGTTCGCGAAAGTTTTTACCCCAAAGCAACGTCTTGTTAGGGATCGATAA
TTTTGTTAATTGAGTATCTTGAAGGAGAAAAGGGAAATCTTTTAAGTAGA
CCTTAATGAGAGGACAATCGTTGATAATATTGAGATTCAAAATTTCACAA
TTTGAACAGTTAGATTAATTTGAAAACTTTTTCCTTTTCTTGAAGAAAAT
TTAAAGATTCAAGGTGTGTCAATTATTTTTTCTTTTTTTTACAGAAAAGC
GATTGACAGGATTGGAATTTTACTGTCTAAACGATAACCCACTTTGTGAA
CAATGTTATACGGTATGTTGTAGTAAAATAGTTCGTGGTCACCCCTTTGA
GATGCGGGGAAAATTCAATCTACCTAGCAAGGGTGCAGTGCTGGCGAGTT
TCAATAAGGACGAAATTCATACGCCTTCATACCCCATCTCCTGAAAATTT
TTCTGAATTTCCTCACAAACATCCCCAAGTATAGAAATTGTACGTAAAAA
TGCTATTACTATTCGCAATGTTATCTTTTTTGCATTTCTGATTGAGATTT
CACAGTTCCCGCCATCATTATAAGATCTTTGATGATTCGTTTGTAACTTT
TGCTTTCATTTGATTACCCCGCTAAACCAAATGGTGTATCTTCACTGGTC
GAATTTCGCACCTCTGTTTGACAAGTTATTTACAAGTTAAAATTATGCCT
TATATATATGTTTTCTTTGCCCCAACATTTGTAGAATACACTGGAAGACT
GCGTTGTTTGCGACCAGAAAATTACGGAACGTATTTTGAAAGCTGTCGGC
AAATCATACCATCCTCAATGTTTTAAATGTACGAATTGTAGTAAGAAGTT
AGACGGGGTGCCATTCACATTGGACAGCGCAAACAGAGTTCACTGCGTGG
AATGTTATCAAGTGTAAGTCATAAATGTTTTTATTTTTTTTCGACTTTAC
TCGGTCATTCTTCCAATGGAAAGTTTTCTTTAGGCCTTTGATTGTTTGAT
TGCCAATGTCGGCTAAATCCTCCATTATTAATTCATATAGATTTTAAAAC
TGTCACCTGTCCCTAATTTGGGTTTTACGCTAAAAATCTTTACTGCAAGT
GTTTATACCTAAAATTTGGGCACCATCTTTTAAGGTCTTTTTCTAGTAAT
AAGTTTGATGAATTTCGAAAATTTTTAAAATTCTTGTCATTATTATAATT
TTTGTGACGTCATTAAGCCTTTTTACTTTGAGATCCCTATGAGATCCCTT
TGCACAAACTGCTTCAAACCACTAAAGCCTCACTCTAAGTACTTTGTTTT
CAATCATCCGATTATATGTTTTTCTTCGTTAGTTTTTGAAATTTAGTTTT
ACATAATTTATTTTACATTTATTTGCAGAAAATTCTCACCGAAATGTGCG
GCGTGCAGCGAACTCATCATGCCGACAAACGTAAGTTTATATGAATACCT
GCTAGATATTAAACTTATCAATACTTATTCGCTCTTGAATAAAACATTCA
CGTTATCTTGAAATAAACTTTCATCATGGACCTAAAATCAAATGAAGACG
CCTAGATAACTTGGATTCTAAATCCAAACTGAAAAGCTACCCTTTCGGCA
ATTAATTGTCAACTTTTAAAGTTTAATCCTTTTTTAATAAGAACAAACAA
AGTATTAAGTTCAGGCATTTCAGGTTAAACCAAAGTTATGCATTAACACT
TAATCTGCCATTGTGGAATCAAACGTTCGAATTTGTAGAAGCAACACTCC
TCACGCAAATCGAATGTTTGATTCCATAACGGTGGAATTTAAGTTTATAT
ACAGGGACCAGGTTGGGATCTTTTTTTATGTTTTACATAGAATGACCAGA
ATTATCCATTTTATTTTAGGATCGAGGAGAGACAGTACACATTGTTTCCA
TGCAAAAGAATTTTCACGTACATTGCTATAAATGCGAGGTTAGTAAATGT
TTCTTCATAGTAATCATCGCCTACTAATCTCAGACTGTAGTGGACATATT
TTATTTATTACCGTTCCAGCCCGACTGGCGTGCCAGTATAGATAACCCAT
CGTTTCAAATGGACGTGTTTGATATTTTTGTTATATCATAACTAGACGAA
GAGAATATTTTTTAAAAAGCAAAGCGTCCAACACGGAAACCCCTTATAAA
ACAAAAGATTTTTTTTGTACAAGGCTATAACCACGAAACTTAAAATAAAT
TTTTGTTCTCTCTTAGGATTGTGGTATCTTACTATCGAACGAAGAAGGGC
GTGGTTGTTTCCCTATTGGTGATCATCTACTTTGTCAAAGGTGTAATGGA
AAGCGAATGGCTAATACTACTGAATTATAGATCGTACATACAAGCTGTAA
ATCTGAAAGAAATAATTATGTCGATCTTTAATTGTCACATATACGGGTTT
CGAATTCAAATTAGTTTCGGTTTTGATCATGTACAATATGCACGGAAATA
TATCAAGTAGAGAATCTCCAACCTCCTTCCCTGCGTATTAACAACTTTTT
TATTCTTACTGATAACGCCTGATATTCTCTATGGCGTACATCAGTATCGT
AAAAAAAGCCTGGAATACACGAGGACGAGGTTGAACAATCTCCGATTAGC
TAAAATGTGCACATTGGTATATTATCTAACCAATGAGTTTATTTGCTAGG
TATTTTTCGTGTAAATTACACGGAGAATCAAGACAGGCTAATTTGAAATC
CTCAAATTCAGTTGGTCACATCGAAACTTCCATAAAAAATTCCCTTTTGT
CTTTTCTATAGTATGTTTGTAGGTGTTTGTAGCACTTTTATTTTTTTCTC
GCATATATTGTACATACAATTATAATTTTTACATTAAACTTTTTTGTACC
TAAAATCTTTATTTCTTTTAAATATTGTGTCACTTCATCTATGCCCATAC
ATGGCCTCTTATAGTATAGTTTATACTTAGCGTGTTCTCAATTTTATTTA
TTCTAGAACCCCGGATTCATCATAGTTTTCAGACTTTCAACTCCCCTGGA
TCTTAGGATATTAAGGAGGTCAATTGGTTTACTTTTTTTGAATGGCTAAG
GATTCCAATAGGATTCTAGCTCGTTGGACTTCTTTCTTTGTTATGCACCA
AATTTCTGTTTCTACATTACTGTTTGTTGTTTTATTGTTTCAAAAATCTT
TATTTTTAATGTATTTTATTAACTAAACTTAAATATTGATATTCTAAAAA
GATATGATTTAACTTTTTTTATAACTTTGTAAAAGTGACTGACTCCGCTC
TTTTAGTTTTTGACTGACTCAAAATACTCCAACCAAACTCGTGATCTTTT
ACACAATACTTAAGGGCTCTGACCATAGTGAATTTTTAACATTTGCCACT
TACAAAATATAAATTTCTACTTGATGTAGCACACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012735XLOC_012735Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022667-exon-sc0000430-1575043694:270354..270532TCONS_00022667-exon-sc0000430-1575043694:270354..270532Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1575043694:269615..269883TCONS_00022667-exon-sc0000430-1575043694:269615..269883Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1575043694:269282..269383TCONS_00022667-exon-sc0000430-1575043694:269282..269383Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1575043694:265571..265638TCONS_00022667-exon-sc0000430-1575043694:265571..265638Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1575043694:264970..265148TCONS_00022667-exon-sc0000430-1575043694:264970..265148Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1575043694:264453..264504TCONS_00022667-exon-sc0000430-1575043694:264453..264504Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1575043694:263945..264013TCONS_00022667-exon-sc0000430-1575043694:263945..264013Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1575043694:262496..263666TCONS_00022667-exon-sc0000430-1575043694:262496..263666Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:270354..270532TCONS_00022667-exon-sc0000430-1510915933:270354..270532Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:269615..269883TCONS_00022667-exon-sc0000430-1510915933:269615..269883Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:269282..269383TCONS_00022667-exon-sc0000430-1510915933:269282..269383Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:265571..265638TCONS_00022667-exon-sc0000430-1510915933:265571..265638Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:264970..265148TCONS_00022667-exon-sc0000430-1510915933:264970..265148Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:264453..264504TCONS_00022667-exon-sc0000430-1510915933:264453..264504Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:263945..264013TCONS_00022667-exon-sc0000430-1510915933:263945..264013Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1510915933:262496..263666TCONS_00022667-exon-sc0000430-1510915933:262496..263666Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:270354..270532TCONS_00022667-exon-sc0000430-1491911889:270354..270532Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:269615..269883TCONS_00022667-exon-sc0000430-1491911889:269615..269883Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:269282..269383TCONS_00022667-exon-sc0000430-1491911889:269282..269383Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:265571..265638TCONS_00022667-exon-sc0000430-1491911889:265571..265638Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:264970..265148TCONS_00022667-exon-sc0000430-1491911889:264970..265148Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:264453..264504TCONS_00022667-exon-sc0000430-1491911889:264453..264504Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:263945..264013TCONS_00022667-exon-sc0000430-1491911889:263945..264013Clytia hemisphaericaexon
TCONS_00022667-exon-sc0000430-1491911889:262496..263666TCONS_00022667-exon-sc0000430-1491911889:262496..263666Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000430supercontigsc0000430:262496..270532 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.84654	4.71032	2.10098	1.03179	38.6773	29.089	72.7218	53.1848	16.4827	26.9466	13.7993	13.84	24.932	27.7704	11.6237	27.0585	1.82252	10.5349	30.2504	31.3099	0	0.756883	0.481008	1.29595	3.49696	7.17516	9.04333	13.0619	59.3314	45.6467
Blast
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BLAST of TCONS_00022667 vs. Swiss-Prot (Human)
Match: LPP (Lipoma-preferred partner OS=Homo sapiens GN=LPP PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 7.120e-68
Identity = 101/212 (47.64%), Postives = 141/212 (66.51%), Query Frame = 1 
Query:  376 DDELDMLTSMLSLGLQNTHHPDFFGVCYKCRDTIIGEGKGCTAMGNQYHVLCFLCKECEKRLTGLEFYCLNDNPLCEQCYTNTLEDCVVCDQKITERILKAVGKSYHPQCFKCTNCSKKLDGVPFTLDSANRVHCVECYQVKFSPKCAACSELIMPTNDRGETVHIVSMQKNFHVHCYKCEDCGILLSNEEGRGCFPIGDHLLCQRCNGKRM 1011
            +DEL+ LT  +   ++N    ++FG C +C + ++GEG GCTAM   +HV CF C  C  +L G  FY +     CE CY NTLE C VC + I ERIL+A GK+YHP CF C  C + LDG+PFT+D+   +HC+E +  KF+P+C+ C E IMP   + ETV IV++ ++FHVHCY+CEDCG LLS  + +GC+P+  H+LC+ CN  R+
Sbjct:  390 EDELEHLTKKMLYDMENPPADEYFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYINTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHILCKTCNSARI 601
The following BLAST results are available for this feature:
BLAST of TCONS_00022667 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LPP7.120e-6847.64Lipoma-preferred partner OS=Homo sapiens GN=LPP PE... [more]
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