TCONS_00022367 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022367
Unique NameTCONS_00022367
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3048

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022367 ID=TCONS_00022367|Name=TCONS_00022367|organism=Clytia hemisphaerica|type=transcript|length=3048bp
GAAGAATGTCGTCCATGTATCTTCCGTACACTTTAGTATCAGCTTCGGTT
CCATCGTACATGCTAAGCCAAAGCAAAGACCCTCCAGGGAAACCCCCTTA
ACTAATATCACATTTTGTATGCTAAGCCGTCCGTTATGGCGAGTTTGAGA
GGATGATGGTTTAACATTGCTAGCCCGCCTATTCCTTGTTATTCAAACTC
CtggttattcgaagtaaattcttTCCCTCCTTTGGAGCTTAATAACCGGG
AGTTTACTGTAACTTCATTAAATCACAACAACTCAACAGCATATCATTAA
AACAACACTGCCATGGTGGTTTTAAATTTGCACAACAGTTGTCTATGTAT
GACATAGGAAATATAGCTCAGGCGAGTTAAGAATATCAACTTGTTATTAC
TAAGATGTCAGGAGAACAGCCACAAGATGCGATGGATGCAGAAATAGATG
TCATTATCTATCCTGCTGTAGCATGTTTTGGAATAATTATCCTGATTATC
ATGTGTCGTTGCTGCTTTTCCCGTTTATGCTGGGAACCATGTACGAAATG
GTGTTGTATCAAACCAATGTTACGTTCGCCAAATCCCTTGAAAATATCAT
CTACAAGTAAAGAATCAATgtgtttcaaagattttcaaacatGTATGGGT
TGTTTATATCTATATAGTCCAATCGACTGTCGACGGATGAGCCAGATACA
AATGTATGAAGCCATTCATCGATATAATGAACCTGGTAATCGACCACCGA
TGTTTCATGATCTCATTGATCACATTGCAAATGATGAACTTATATCCTTG
ATGTTGGAAGAGATCAATGCAGCAAACCCTCAACTATTCCTCAAGGTTTT
GCCAACTGGAAGTTTGAGAGAACAGTCAGGCAAGATTCTACCGTCCACAT
CTGTTTTGGCGTCTGACCACGATCTAATGCTGATTCCAGGTGATGTAGAC
GTAGGACAGCCTGGTTGTGGACAAAGAAATGCTTTTGAATTGGTTCCTTT
GAAAGATGAGCCTGGTTATGTTTGGCTTAGATTGAATCGAAATGACTTGA
CAGATGTTTGGACCAATTTGTGTTTCCAAAAGCAAGACCAAGATGGAACA
GTGTCTTTCTACCTGTCACAACTTGCCGTTTACAACCAAATTCGTAACAC
TTTGAACGTGTCGACATCTGTTCAAAAATATATCACTGACATGACGATCA
CAAAATATCCCAATGAATGCTGCCAGTGTTGCTGCGAGTGCGTGAAAAAT
ACATGTTGTGGTCAACTACAAATCAACGAATTCATCATCGAGAGGAATGG
ACCCGCCCTAACTCTTATTGTACGCCCAAAGTATGGAGAAGAGATGACGC
ATGTCGATTTcacttttggtatttttttgcCCACAATTTCCAGACGATTT
TCAACattttttcaaaaaaaggagacGGAACAGAGAAAGACCGTATTACT
GGCCAAGCGAAGAGATAGTCAACAAAATCAAGCGAACTGGTTGTCATATA
GTACCTAAACCTTCTTACAAAGGTCTGACAGTCATTGAAAAAGagCAAGG
GCTGTTGGCCAATTATGCTGTCTTAGAATGGCGTATGTCATTCTCGATGG
CCGAAGCAATTCTGTTCGATGTTCTACCAGAAATTGCAAAAGAAGCATTT
CTAGCTTTCAAAGCGACCATCAAGTTACATGTTAACAACATAGCAGACGA
ATACGGGGTGTTCCATAAAGTCCAGTCCTACTTCTTAAAAACTGTGCTTT
TCCTTGTCACCGAATCAACAGAATCTGCTTTTTGGAATACTGAGATCCAT
CTTCCTGGATATAATTCAAGAGCAAGCACGGAGAGAAATAATCATAGGAG
AGAAACCTCACCGGAAATGATTCCGATGTCGAATTTGACTTCGAGGAGTA
TAATTCTTGAAATGATTGACGAAGATGAAGACACTTCCTCATCAAGTGAA
GACTCGCCCTTGATTGCAGATGACACCGAAAATTCAAATCCAAGTAGATC
GGGCTACGACAACTTAGGTTTACAAGATCCTGAAGCCATTCGGAGAAGTG
AAGAAGCGATACAGCGAGAGGAGGAAGAGAAGAAGGAAGCACTCCGTGAA
AAACGAAGACAAGAGCGCactatttgtttttataaaaagctCATGGATAA
ATTATTAGCCGTTTTTGAGAAAGATAAACATCTTCCCCATTACTGGAATC
CGAAGATCGAACTTTTCACCAGACAAGTGTACAATGAAAAAGACTACGAT
TTCATCTTGAACCGATTGAACACCATTCGGAAGGACTACCTAAACCATCT
TGCAGACGACTGGTTGGAATTTCAACGTATATTAACATACACTTGCTGTG
AATTTTGTTTACCTGGACACCGCCCTGCTAAATATATTCCACTTCAAAAA
ACTATTCGATGTTATTGCTGTAGTATTAATGTTGGAAATGAAGGCACTGA
TCGTAATTGGGACATGGATCCATCTCGGCTTTACGTTTATTAAAGAAACT
CCACGAACGGTTGAGCAGTAGGTCAAAACTCGCATTATTTTGATGGTTTT
GTTTAGGTTGATATCATTTtccaatctcgtacccagagtttgatcgtttg
cttactcaacaagctttttcacattgaattgacactgatgtggagcaaga
ttggttaggAAAAGggaaagaaaacaattttttgtttattcagcacaaaa
tcgaacaatataacaataggagcCACTGGCTTGATATAAGACATGATATG
AAAAGGGAACATTTATGTAAACCTAAACCTTTAATGAATCATTTTTCATG
taatttaaattgaaattgcATTAGTGAGGTAATTAAGTTATTTTTGTAAT
GTACTTTAGCCTTATCATTATCAAACACCACCAGCACCGGCAAAAAAACT
TCATCACGCAAACCGTTGGCGCATCCTAACGTTGCTTTGTTCAATTCCGA
attatgaaattaaattttttacgaaaattttatcacatttttgaaatatt
ttttatattttccgtAATAATAAGTTGCaagaatttttccaatatttt
Run BLAST on NCBI

protein sequence of TCONS_00022367-protein

>TCONS_00022367-protein ID=TCONS_00022367-protein|Name=TCONS_00022367-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MSISLLVFFCPQFPDDFQHFFKKRRRNRERPYYWPSEEIVNKIKRTGCHI
VPKPSYKGLTVIEKEQGLLANYAVLEWRMSFSMAEAILFDVLPEIAKEAF
LAFKATIKLHVNNIADEYGVFHKVQSYFLKTVLFLVTESTESAFWNTEIH
LPGYNSRASTERNNHRRETSPEMIPMSNLTSRSIILEMIDEDEDTSSSSE
DSPLIADDTENSNPSRSGYDNLGLQDPEAIRRSEEAIQREEEEKKEALRE
KRRQERTICFYKKLMDKLLAVFEKDKHLPHYWNPKIELFTRQVYNEKDYD
FILNRLNTIRKDYLNHLADDWLEFQRILTYTCCEFCLPGHRPAKYIPLQK
TIRCYCCSINVGNEGTDRNWDMDPSRLYVY
Run BLAST on NCBI

transcript from alignment at sc0000414:33334..40499+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022367 ID=TCONS_00022367|Name=TCONS_00022367|organism=Clytia hemisphaerica|type=transcript|length=7166bp|location=Sequence derived from alignment at sc0000414:33334..40499+ (Clytia hemisphaerica)
GAAGAATGTCGTCCATGTATCTTCCGTACACTTTAGTATCAGCTTCGGTT CCATCGTACATGCTAAGCCAAAGCAAAGACCCTCCAGGGAAACCCCCTTA ACTAATATCACATTTTGTATGCTAAGCCGTCCGTTATGGCGAGTTTGAGA GGATGATGGTTTAACATTGCTAGCCCGCCTATTCCTTGTTATTCAAACTC CtggttattcgaagtaaattcttTCCCTCCTTTGGAGCTTAATAACCGGG AGTTTACTGTAACTTCATTAAATCACAACAACTCAACAGCATATCATTAA AACAACACTGCCATGGTGGTTTTAAATTTGCACAACAGTTGTCTATGTAT GACATAGGAAATATAGCTCAGGCGAGTTAAGGCAAGTCCAAGACCTATTT CCCGATATTCccaccgcttcccattattcattacttaagggctctgacca tagtgaacttttcataattgccgtgtttaaaatgtgttttctgactgatg taaccaaatagactatggcatgttatacattttctgttagacaaactatt cctgaatctgaaaattcaaaaattgcattgaaaaagtttgatgaagaaga aaatgaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcat caatttttcatctggattttgcttaaaaaaacattcataacttttgacac atctttttagaaaaattttccgcaaaatttaaaatagttcaattcttagc ggacagtttgaaaaagttcGAAGCAAAAAGGTTacttacccattaaaact tagcactttttataaaagaaggtgatgcaacatattatcaacgtcttttt aaagttcataacgtcattttagcaattgagtttttaattactcttaaggg atttgattaaaaatcaatttataaaggcaattctttgttaaaagtgttaa agaatctaaaacataacttttatgttcagatactaaaatcaattttctga ctatggtcagagcccttaattttcACATATCATACAGCTCAAAAAGCGTA TTGACGAGATGGTTACGGAAAGGACTGGgtaaaaaaatttagattagGCC GATTTCAAGGTAttggccaaaaactgattttgaagTTATGAAATTCGTCG AAATACACGTCATAGTTAAGACCAAGAATATTCTTGGTAAGACTCGTGTA ACTTATGGCATGTCCAAAAAAGGACATAAGTTTGGCGCAGAAAATTGAGG GAGTTAGGTATGGTCATAGTGTATTAAGATGCAGATTTCAGAACTGCCTG TtatcataaaataaattttttgtcttttttgagaaattaagGAAAACGTG CTGCATGATGCCattcttgatgacgtcataaaacttaaaattaCTATTTA ATGAgcttttaacgaaaaaaaattgatgtgtTCATGCTACCTAGTAACCC TAAAAAGCTTTAGAACAGCATCTCTCATTTTTATATGTACTATATGCTCA TAGAAAAACAAATTCCTTACAGTTTAATGATAAGTTAATGTACGCAAGAA GTTTTCCCTGGATTTTAGAAGGGGAACACACTCAACCATAGAGTTGTATA ATAAGTTAAGGGGATGGGTAAATAGTGCGATCTAATCAacatttctaaat aaaaaattcttagTTTAGTTAGTTAGCTTAGTTCGAGGAAGAAATGGTTT TAATTGCATtccttgaaaaaattaaaaacatttcatttaCATTCAATTCA CTCAAGTACTTGATTCACTCTAACTTACATTACAAATACTGTGCCAAAAG CGGAATGTGTAATTAAAGTTGGCAAAAAACATAATatgattttctaagaa atcatCATTTGGCAGATTGATAAAAGAGAACCATGAACGTAGGATTAGTC AAATCATGTTGTTTGCGTTTGTTTGTTGACATTGCAGTGACAAAGATGAT TGAATGACTTTCACAAANTTTCATcttgattttgcttaaaaaaacagtca taacttttgacacatctttttagaaaaattttccgcaaaatttaaaatag ttcaattctttgcggacagttgatgcaacatattattaacgtttttttaa agttcataacgtcatttctgcaattaaattcttaattactctgaagggat ttgattaaaaagctatttataaaggtaattctttgttgaaagtgtAAAAG AActtaaaacataacttttatgttcaaatactaaaaccaattttccgact atggtcagagcccttaagctttaagaatagttttactatAGCATGTCCTA GTATAGACTTGTAAACAAGTCTGTTATTTACCACGCGCAACAAAATTTAG GAGTCGGGTACTGGCTAGGTATAATCGGTAAAACGTTCACACGGGAATTA GCGCGCGAGAGAGAAGGAAAATAACNCAATCAGAAAGAGTATTGAGCTAC ATTAGTTGAACTTAGCTTTTGAACAAGGAATCATTTTTTTGACGACAGGA GCTGTACATATTTCTACATATGTTTttaatatatttcaaaattttggtaa tgCGTAATGTCCGTTTCATGGCTTTTTTTTACAACCCTTCTTTCAAGCAC TTAATTTCTTTGTTGTTTTCGATTAAAAATTATCGTTAACATAATCCAGA TGGTAGttgacttaagggctctgaccatagtgaatttttcataattgccg tgtttgaaatgtattttctggactgatgtaaccaacaaaactatggcatg ttatacattttctgttagacaaactattcctgaatctgaaaattcaaaaa ttgcaatgaaaagatctgatgaagaagaaaatgaagacNttgaaattttg aaatttgagaatatcgtTCTAGATACAGTTTCCCGATTTTACCACTCTAG TAAGATTTTCCGGTGTGTGATGTTTTTCATTCAACGACTATACTAGTCTA GTCCTAGTATTATGGTATATCTTGTATCTTGTACTAGAATATCAACTTGT TATTACTAAGATGTCAGGAGAACAGCCACAAGATGCGATGGATGCAGAAA TAGATGTCATTATCTATCCTGCTGTAGCATGTTTTGGAATAATTATCCTG ATTATCATGTGTCGTTGCTGCTTTTCCCGTTTATGCTGGGAACCATGTAC GAAATGGTGTTGTATCAAACCAATGTTACGTTCGCCAAATCCCTTGAAAA TATCATCTACAAGTAAAGAATCAATgtgtttcaaagattttcaaacatGT ATGGGTTGTTTATATCTATATAGTCCAATCGACTGTCGACGGATGAGCCA GATACAAATGTATGAAGCCATTCATCGATATAATGAACCTGGTAATCGAC CACCGATGTTTCATGATCTCATTGATCACATTGCAAATGATGAACTTATA TCCTTGATGTTGGAAGAGATCAATGCAGCAAACCCTCAACTATTCCTCAA GGTAACTACTTGAGTAAAGGTAAAAGCCAGCTGCGGTAAAAGGCTTCAGA GGGATCTGTCTAGAGCCCGGGGGTTCTAAAGTTCCTATTTTTCATTCCtt tcaaaaatcatcaatcaTTTCCCTCGAAAATACAGTTTTTATTAGCAGAT GCCGAGAATTAATTTGAAAACTAACTGTTCACGTTTTACGTCTCAACATC CAAATAGAATCTCTCTTTTCATTTGAGGTTTTGCCAACTGGAAGTTTGAG AGAACAGTCAGGCAAGATTCTACCGTCCACATCTGTTTTGGCGTCTGACC ACGATCTAATGCTGATTCCAGGTACGTATTACTATGGCAACCCGATCCCT TTTTTTTTGTCGTCTcgttcaaattttgaacagtccTATACTGAGGGTAT ACTTAGGATGTCGCTCAGGCCAGTCCAGACTATCCATTTACACAGTATTG GGTGTACACTGAGATCTGCTTTATCAAAACCCTTACATATAAGAGTCTTA TCTCTCATCATTCTTCTCATCATAAGGTGATGTAGACGTAGGACAGCCTG GTTGTGGACAAAGAAATGCTTTTGAATTGGTTCCTTTGAAAGATGAGCCT GGTTATGTTTGGCTTAGATTGAATCGAAATGACTTGACAGATGTTTGGAC CAATTTGTGTTTCCAAAAGCAAGACCAAGATGGAACAGGTAAGAATTGTT TAAAGCAGCGAAAGTCAGTCAATCAGTTCCAGTTCTCACATTCCCAGCAT CACCATAGTTACACCGCTCTCACAGCCCCGACGTAGAACTTTTTCCTACA GTGGGGATAAACATTTATATTGAAATACCATTACTAGGGTTGCTTGATAT ATTGGCTTGAATTAAATCATAGTGTCTTTCTACCTGTCACAACTTGCCGT TTACAACCAAATTCGTAACACTTTGAACGTGTCGACATCTGTTCAAAAAT ATATCACTGACATGACGATCACAAAATATCCCAATGAATGCTGCCAGTGT TGCTGCGAGTGCGTGAAAAATACATGTTGTGGTCAACTACAAATCAACGA ATTCATCATCGAGAGGAATGGACCCGCCCTAACTCTTATTGTACGCCCAA AGTATGGAGAAGAGATGACGCATGTCGATTTcacttttggtatttttttg cCCACAATTTCCAGACGATTTTCAACGTAATTTTCTTCTATTCTTTAAAA AACCTTTGTCTCCCCATTAAAATACACATAAATATTACCTTCTAACTGCT TGTTTAATTTAGACATTTTGATCGATGATAGTTGTAGTACTGCTAAAGTC TACTCATTTTATATTACGTTAAGTTAATAGAACTGGTCAAAtcaaaagat tctaaaaattaGCGTGAAATTTTATCAACAATCTTTTCATCAATTGTACA AATACCTTTAAAATCCACAGGGATAAACATATCattcttttagatttttt caaaaaaaggagacGGAACAGAGAAAGACCGTATTACTGGCCAAGCGAAG AGATAGTCAACAAAATCAAGCGAACTGGTTGTCATATAGTACCTAAACCT TCTTACAAAGGTCTGACAGTCATTGAAAAAGGTAAGATGTCCATCAAAAG TACGCCTGAAAAAAATCAGTTCTACAGTATCAATTACCATCAAATGTTGT CTTTCTATGCGGTTCTCTGATAAAATGAATCCTCTCATATCTATatcctt ttcattttcagagCAAGGGCTGTTGGCCAATTATGCTGTCTTAGAATGGC GTATGTCATTCTCGATGGCCGAAGCAATTCTGTTCGATGTTCTACCAGAA ATTGCAAAAGAAGCATTTCTAGCTTTCAAAGCGACCATCAAGTTACATGT TAACAACATAGCAGACGAATACGGGGTGTTCCATAAAGTCCAGTCCTACT TCTTAAAAACTGTGCTTTTCCTTGTCACCGAATCAACAGAATCTGCTTTT TGGAATACTGAGATCCATCTTCCTGGATATAATTCAAGAGCAAGCACGGA GAGAAATAATCATAGGAGAGAAACCTCACCGGAAATGATTCCGATGTCGA ATTTGACTTCGAGGAGTATAATTCTTGAAATGATTGACGAAGATGAAGAC ACTTCCTCATCAAGTGAAGACTCGCCCTTGATTGCAGATGACACCGAAAA TTCAAATCCAAGTAGATCGGGCTACGACAACTTAGGTTTACAAGATCCTG AAGCCATTCGGAGAAGTGAAGAAGCGATACAGCGAGAGGAGGAAGAGAAG AAGGAAGCACTCCGTGAAAAACGAAGACAAGAGCGCactatttgttttta taaaaagctCATGGATAAATTATTAGCCGTTTTTGAGAAAGATAAACATC TTCCCCATTACTGGAATCCGAAGATCGAACTTTTCACCAGACAAGTGTAC AATGAAAAAGACTACGATTTCATCTTGAACCGATTGAACACCATTCGGAA GGACTACCTAAACCATCTTGCAGACGACTGGTTGGAATTTCAACGTATAT TAACATACACTTGCTGTGAATTTTGTTTACCTGGACACCGCCCTGCTAAA TATATTCCACTTCAAAAAACTATTCGATGTTATTGCTGTAGTATTAATGT TGGAAATGAAGGCACTGATCGTAATTGGGACATGGATCCATCTCGGCTTT ACGTTTATTAAAGAAACTCCACGAACGGTTGAGCAGTAGGTCAAAACTCG CATTATTTTGATGGTTTTGTTTAGGTTGATATCATTTtccaatctcgtac ccagagtttgatcgtttgcttactcaacaagctttttcacattgaattga cactgatgtggagcaagattggttaggAAAAGggaaagaaaacaattttt tgtttattcagcacaaaatcgaacaatataacaataggagcCACTGGCTT GATATAAGACATGATATGAAAAGGGAACATTTATGTAAACCTAAACCTTT AATGAATCATTTTTCATGtaatttaaattgaaattgcATTAGTGAGGTAA TTAAGTTATTTTTGTAATGTACTTTAGCCTTATCATTATCAAACACCACC AGCACCGGCAAAAAAACTTCATCACGCAAACCGTTGGCGCATCCTAACGT TGCTTTGTTCAATTCCGAattatgaaattaaattttttacgaaaatttta tcacatttttgaaatattttttatattttccgtAATAATAAGTTGCaaga atttttccaatatttt

Coding sequence (CDS) from alignment at sc0000414:33334..40499+

>TCONS_00022367 ID=TCONS_00022367|Name=TCONS_00022367|organism=Clytia hemisphaerica|type=CDS|length=3429bp|location=Sequence derived from alignment at sc0000414:33334..40499+ (Clytia hemisphaerica)
ATGTCGATTTcacttttggtatttttttgcCCACAATTTCCAGACGATTT
TCAACattttttcaaaaaaaggagacGGAACAGAGAAAGACCGTATTACT
GGCCAAGCGAAGAGATAGTCAACAAAATCAAGCGAACTGGTTGTCATATA
GTACCTAAACCTTCTTACAAAGGTCTGACAGTCATTGAAAAAGagCAAGG
GCTGTTGGCCAATTATGCTGTCTTAGAATGGCGTATGTCATTCTCGATGG
CCGAAGCAATTCTGTTCGATGTTCTACCAGAAATTGCAAAAGAAGCATTT
CTAGCTTTCAAAGCGACCATCAAGTTACATGTTAACAACATAGCAGACGA
ATACGGGGTGTTCCATAAAGTCCAGTCCTACTTCTTAAAAACTGTGCTTT
TCCTTGTCACCGAATCAACAGAATCTGCTTTTTGGAATACTGAGATCCAT
CTTCCTGGATATAATTCAAGAGCAAGCACGGAGAGAAATAATCATAGGAG
AGAAACCTCACCGGAAATGATTCCGATGTCGAATTTGACTTCGAGGAGTA
TAATTCTTGAAATGATTGACGAAGATGAAGACACTTCCTCATCAAGTGAA
GACTCGCCCTTGATTGCAGATGACACCGAAAATTCAAATCCAAGTAGATC
GGGCTACGACAACTTAGGTTTACAAGATCCTGAAGCCATTCGGAGAAGTG
AAGAAGCGATACAGCGAGAGGAGGAAGAGAAGAAGGAAGCACTCCGTGAA
AAACGAAGACAAGAGCGCactatttgtttttataaaaagctCATGGATAA
ATTATTAGCCGTTTTTGAGAAAGATAAACATCTTCCCCATTACTGGAATC
CGAAGATCGAACTTTTCACCAGACAAGTGTACAATGAAAAAGACTACGAT
TTCATCTTGAACCGATTGAACACCATTCGGAAGGACTACCTAAACCATCT
TGCAGACGACTGGTTGGAATTTCAACGTATATTAACATACACTTGCTGTG
AATTTTGTTTACCTGGACACCGCCCTGCTAAATATATTCCACTTCAAAAA
ACTATTCGATGTTATTGCTGTAGTATTAATGTTGGAAATGAAGGCACTGA
TCGTAATTGGGACATGGATCCATCTCGGCTTTACGTTTATTAAATGTCGA
TTTcacttttggtatttttttgcCCACAATTTCCAGACGATTTTCAACat
tttttcaaaaaaaggagacGGAACAGAGAAAGACCGTATTACTGGCCAAG
CGAAGAGATAGTCAACAAAATCAAGCGAACTGGTTGTCATATAGTACCTA
AACCTTCTTACAAAGGTCTGACAGTCATTGAAAAAGagCAAGGGCTGTTG
GCCAATTATGCTGTCTTAGAATGGCGTATGTCATTCTCGATGGCCGAAGC
AATTCTGTTCGATGTTCTACCAGAAATTGCAAAAGAAGCATTTCTAGCTT
TCAAAGCGACCATCAAGTTACATGTTAACAACATAGCAGACGAATACGGG
GTGTTCCATAAAGTCCAGTCCTACTTCTTAAAAACTGTGCTTTTCCTTGT
CACCGAATCAACAGAATCTGCTTTTTGGAATACTGAGATCCATCTTCCTG
GATATAATTCAAGAGCAAGCACGGAGAGAAATAATCATAGGAGAGAAACC
TCACCGGAAATGATTCCGATGTCGAATTTGACTTCGAGGAGTATAATTCT
TGAAATGATTGACGAAGATGAAGACACTTCCTCATCAAGTGAAGACTCGC
CCTTGATTGCAGATGACACCGAAAATTCAAATCCAAGTAGATCGGGCTAC
GACAACTTAGGTTTACAAGATCCTGAAGCCATTCGGAGAAGTGAAGAAGC
GATACAGCGAGAGGAGGAAGAGAAGAAGGAAGCACTCCGTGAAAAACGAA
GACAAGAGCGCactatttgtttttataaaaagctCATGGATAAATTATTA
GCCGTTTTTGAGAAAGATAAACATCTTCCCCATTACTGGAATCCGAAGAT
CGAACTTTTCACCAGACAAGTGTACAATGAAAAAGACTACGATTTCATCT
TGAACCGATTGAACACCATTCGGAAGGACTACCTAAACCATCTTGCAGAC
GACTGGTTGGAATTTCAACGTATATTAACATACACTTGCTGTGAATTTTG
TTTACCTGGACACCGCCCTGCTAAATATATTCCACTTCAAAAAACTATTC
GATGTTATTGCTGTAGTATTAATGTTGGAAATGAAGGCACTGATCGTAAT
TGGGACATGGATCCATCTCGGCTTTACGTTTATTAAATGTCGATTTcact
tttggtatttttttgcCCACAATTTCCAGACGATTTTCAACattttttca
aaaaaaggagacGGAACAGAGAAAGACCGTATTACTGGCCAAGCGAAGAG
ATAGTCAACAAAATCAAGCGAACTGGTTGTCATATAGTACCTAAACCTTC
TTACAAAGGTCTGACAGTCATTGAAAAAGagCAAGGGCTGTTGGCCAATT
ATGCTGTCTTAGAATGGCGTATGTCATTCTCGATGGCCGAAGCAATTCTG
TTCGATGTTCTACCAGAAATTGCAAAAGAAGCATTTCTAGCTTTCAAAGC
GACCATCAAGTTACATGTTAACAACATAGCAGACGAATACGGGGTGTTCC
ATAAAGTCCAGTCCTACTTCTTAAAAACTGTGCTTTTCCTTGTCACCGAA
TCAACAGAATCTGCTTTTTGGAATACTGAGATCCATCTTCCTGGATATAA
TTCAAGAGCAAGCACGGAGAGAAATAATCATAGGAGAGAAACCTCACCGG
AAATGATTCCGATGTCGAATTTGACTTCGAGGAGTATAATTCTTGAAATG
ATTGACGAAGATGAAGACACTTCCTCATCAAGTGAAGACTCGCCCTTGAT
TGCAGATGACACCGAAAATTCAAATCCAAGTAGATCGGGCTACGACAACT
TAGGTTTACAAGATCCTGAAGCCATTCGGAGAAGTGAAGAAGCGATACAG
CGAGAGGAGGAAGAGAAGAAGGAAGCACTCCGTGAAAAACGAAGACAAGA
GCGCactatttgtttttataaaaagctCATGGATAAATTATTAGCCGTTT
TTGAGAAAGATAAACATCTTCCCCATTACTGGAATCCGAAGATCGAACTT
TTCACCAGACAAGTGTACAATGAAAAAGACTACGATTTCATCTTGAACCG
ATTGAACACCATTCGGAAGGACTACCTAAACCATCTTGCAGACGACTGGT
TGGAATTTCAACGTATATTAACATACACTTGCTGTGAATTTTGTTTACCT
GGACACCGCCCTGCTAAATATATTCCACTTCAAAAAACTATTCGATGTTA
TTGCTGTAGTATTAATGTTGGAAATGAAGGCACTGATCGTAATTGGGACA
TGGATCCATCTCGGCTTTACGTTTATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012548XLOC_012548Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022367-proteinTCONS_00022367-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022367-exon-sc0000414-1491911889:33334..33714TCONS_00022367-exon-sc0000414-1491911889:33334..33714Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1510915933:33334..33714TCONS_00022367-exon-sc0000414-1510915933:33334..33714Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1575043694:33334..33714TCONS_00022367-exon-sc0000414-1575043694:33334..33714Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1491911889:36821..37284TCONS_00022367-exon-sc0000414-1491911889:36821..37284Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1510915933:36821..37284TCONS_00022367-exon-sc0000414-1510915933:36821..37284Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1575043694:36821..37284TCONS_00022367-exon-sc0000414-1575043694:36821..37284Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1491911889:37511..37604TCONS_00022367-exon-sc0000414-1491911889:37511..37604Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1510915933:37511..37604TCONS_00022367-exon-sc0000414-1510915933:37511..37604Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1575043694:37511..37604TCONS_00022367-exon-sc0000414-1575043694:37511..37604Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1491911889:37810..37971TCONS_00022367-exon-sc0000414-1491911889:37810..37971Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1510915933:37810..37971TCONS_00022367-exon-sc0000414-1510915933:37810..37971Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1575043694:37810..37971TCONS_00022367-exon-sc0000414-1575043694:37810..37971Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1491911889:38156..38459TCONS_00022367-exon-sc0000414-1491911889:38156..38459Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1510915933:38156..38459TCONS_00022367-exon-sc0000414-1510915933:38156..38459Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1575043694:38156..38459TCONS_00022367-exon-sc0000414-1575043694:38156..38459Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1491911889:38727..38864TCONS_00022367-exon-sc0000414-1491911889:38727..38864Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1510915933:38727..38864TCONS_00022367-exon-sc0000414-1510915933:38727..38864Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1575043694:38727..38864TCONS_00022367-exon-sc0000414-1575043694:38727..38864Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1491911889:38995..40499TCONS_00022367-exon-sc0000414-1491911889:38995..40499Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1510915933:38995..40499TCONS_00022367-exon-sc0000414-1510915933:38995..40499Clytia hemisphaericaexon
TCONS_00022367-exon-sc0000414-1575043694:38995..40499TCONS_00022367-exon-sc0000414-1575043694:38995..40499Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000414supercontigsc0000414:33334..40499 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0124966 0.0487445 0.0424477 0.0553713 0 0.226388 1.12464 0.67367 0.958286 1.8131 0.772302 9.13126e-05 2.29381 1.51763 1.77746 1.65281 0.261789 1.10525 4.92198 4.31134 0.107408 0.371282 0.200596 0.247504 0.53668 0.252288 2.57474e-05 1.06066 0.124832 0.141315
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022367 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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