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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022255 ID=TCONS_00022255|Name=TCONS_00022255|organism=Clytia hemisphaerica|type=transcript|length=1503bp
ATACCAACAACCCAGGTAGGCTTATTGCTAATAGTATGAAGTAAATCTGT
GACAGCAGTCAGAGACAGCCCAAAGANATTGCtaatagtaagtaagtaaa
tctGTGACAGCAGTCACAGACAGACCAAAGGCTCCtatttcgatagctat
ctacccaaaggtagggggAGCCACTCTTCCTCCtgggattgctccactta
cccggatccttctcttaattgctgagcatcaagcagaaaggcatcaaata
ccattttggaaatctttggtatgacctggctagggattgaacccacaacc
ttgtgtAACAtagctctaccactgcactatggTCACTTTAATTGTTAAAG
CTAATTAGACCCCCCTAGCGATAACTCTGATCACAATATCacacaatttt
ttgtcttcaatcaagTACAcgcaaatcagaaaaaaacttggATAATCaag
catccctttgaaaaagttcCAAATTACGCATCACAGctcaaagatttttc
aaatcacaatCACGTTTTGACCTAGTGATCATGcattcatgaaaaaaatc
caaatcatGTGATCACGCtagaaaaaagtccctatcacaACCATCACACA
AACTGCAAAGTTTCCtttgaaattagaaaattgatattctacttaaaaaa
acaaatgagATCAAATGGGACAATAAGCTGCCAAAGATGAACTCTGAAAA
TGCTGTAGCACAAACTCAGATTTAGCAGTTCTCACTATTACGGTACTCAT
AGATGGCagttaaaattttaatgaaacaGTAGGCCATAAAAGCTAAACAA
AATGATGAATTCCTTAAATCAagcaatgaaaaaaatcaacttcggactat
ctgacaaaacatgggacagtaACTCGGCCACTATTTCACCGAACCTCTCC
AAAGCTAAGGACATTTCTAGTTGGATTTTGAGAACATTCAACAACAGAAG
CAGTGATGTTATGATAACGTTATGGAAATCCTTAGTTCTCCCTCACCTcg
actactgttctcagctttGGTCACCAAACAGCATCCACCAAATTGAACAG
ATTGAATCTGTACAAAAGAACTTCTTCAAAAAGATCAAAGGCCTTAGTGC
TTTCGATTATTGGGAacaattgaaaatattgaaaatgtatTCTTTACAAA
GGAGGAGGGAAAGATACAGAATTATTTATATTTGGTCGATACTAGAGGGT
atagtaccaaatttcagccacactGAAGGAGATGGCACTGTAAAAGGTGG
TGTCTCGTCTTCAACTACAAGCCGACATGGTCGAAAATGCCAACTACGAA
CAATCGAACGAAGTAGCTTTCGCAAATTTATTTGTGAGAGCTTAGCTGTA
AAAACTCTTCAACAGTATTCCCTCTGACATACGAAATATCACTGGCTGTT
AAAAAGATTCATTCAAGAAACGACTCGATAAATATCTGTGCTCTATACCC
GACAAACCTCACACTACGTCGCGACAAGCAAGATGGGCTGAATCAAATGC
TCT Run BLAST on NCBI protein sequence of TCONS_00022255-protein >TCONS_00022255-protein ID=TCONS_00022255-protein|Name=TCONS_00022255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=191bp
MMNSLNQAMKKINFGLSDKTWDSNSATISPNLSKAKDISSWILRTFNNRS
SDVMITLWKSLVLPHLDYCSQLWSPNSIHQIEQIESVQKNFFKKIKGLSA
FDYWEQLKILKMYSLQRRRERYRIIYIWSILEGIVPNFSHTEGDGTVKGG
VSSSTTSRHGRKCQLRTIERSSFRKFICESLAVKTLQQYSL Run BLAST on NCBI transcript from alignment at sc0000408:119585..121087 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022255 ID=TCONS_00022255|Name=TCONS_00022255|organism=Clytia hemisphaerica|type=transcript|length=1503bp|location=Sequence derived from alignment at sc0000408:119585..121087 (Clytia hemisphaerica)
AGAGCATTTGATTCAGCCCATCTTGCTTGTCGCGACGTAGTGTGAGGTTT
GTCGGGTATAGAGCACAGATATTTATCGAGTCGTTTCTTGAATGAATCTT
TTTAACAGCCAGTGATATTTCGTATGTCAGAGGGAATACTGTTGAAGAGT
TTTTACAGCTAAGCTCTCACAAATAAATTTGCGAAAGCTACTTCGTTCGA
TTGTTCGTAGTTGGCATTTTCGACCATGTCGGCTTGTAGTTGAAGACGAG
ACACCACCTTTTACAGTGCCATCTCCTTCagtgtggctgaaatttggtac
tatACCCTCTAGTATCGACCAAATATAAATAATTCTGTATCTTTCCCTCC
TCCTTTGTAAAGAatacattttcaatattttcaattgtTCCCAATAATCG
AAAGCACTAAGGCCTTTGATCTTTTTGAAGAAGTTCTTTTGTACAGATTC
AATCTGTTCAATTTGGTGGATGCTGTTTGGTGACCaaagctgagaacagt
agtcgAGGTGAGGGAGAACTAAGGATTTCCATAACGTTATCATAACATCA
CTGCTTCTGTTGTTGAATGTTCTCAAAATCCAACTAGAAATGTCCTTAGC
TTTGGAGAGGTTCGGTGAAATAGTGGCCGAGTtactgtcccatgttttgt
cagatagtccgaagttgatttttttcattgctTGATTTAAGGAATTCATC
ATTTTGTTTAGCTTTTATGGCCTACtgtttcattaaaattttaactGCCA
TCTATGAGTACCGTAATAGTGAGAACTGCTAAATCTGAGTTTGTGCTACA
GCATTTTCAGAGTTCATCTTTGGCAGCTTATTGTCCCATTTGATctcatt
tgtttttttaagtagaatatcaattttctaatttcaaaGGAAACTTTGCA
GTTTGTGTGATGGTtgtgatagggacttttttctaGCGTGATCACatgat
ttggatttttttcatgaatgCATGATCACTAGGTCAAAACGTGattgtga
tttgaaaaatctttgagCTGTGATGCGTAATTTGgaactttttcaaaggg
atgcttGATTATccaagtttttttctgatttgcgTGTActtgattgaaga
caaaaaattgtgtGATATTGTGATCAGAGTTATCGCTAGGGGGGTCTAAT
TAGCTTTAACAATTAAAGTGAccatagtgcagtggtagagctaTGTTaca
caaggttgtgggttcaatccctagccaggtcataccaaagatttccaaaa
tggtatttgatgcctttctgcttgatgctcagcaattaagagaaggatcc
gggtaagtggagcaatcccaGGAGGAAGAGTGGCTccccctacctttggg
tagatagctatcgaaataGGAGCCTTTGGTCTGTCTGTGACTGCTGTCAC
agatttacttacttactattaGCAATNTCTTTGGGCTGTCTCTGACTGCT
GTCACAGATTTACTTCATACTATTAGCAATAAGCCTACCTGGGTTGTTGG
TAT Coding sequence (CDS) from alignment at sc0000408:119585..121087 >TCONS_00022255 ID=TCONS_00022255|Name=TCONS_00022255|organism=Clytia hemisphaerica|type=CDS|length=576bp|location=Sequence derived from alignment at sc0000408:119585..121087 (Clytia hemisphaerica)
TCAGAGGGAATACTGTTGAAGAGTTTTTACAGCTAAGCTCTCACAAATAA
ATTTGCGAAAGCTACTTCGTTCGATTGTTCGTAGTTGGCATTTTCGACCA
TGTCGGCTTGTAGTTGAAGACGAGACACCACCTTTTACAGTGCCATCTCC
TTCagtgtggctgaaatttggtactatACCCTCTAGTATCGACCAAATAT
AAATAATTCTGTATCTTTCCCTCCTCCTTTGTAAAGAatacattttcaat
attttcaattgtTCCCAATAATCGAAAGCACTAAGGCCTTTGATCTTTTT
GAAGAAGTTCTTTTGTACAGATTCAATCTGTTCAATTTGGTGGATGCTGT
TTGGTGACCaaagctgagaacagtagtcgAGGTGAGGGAGAACTAAGGAT
TTCCATAACGTTATCATAACATCACTGCTTCTGTTGTTGAATGTTCTCAA
AATCCAACTAGAAATGTCCTTAGCTTTGGAGAGGTTCGGTGAAATAGTGG
CCGAGTtactgtcccatgttttgtcagatagtccgaagttgatttttttc
attgctTGATTTAAGGAATTCATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022255-exon-sc0000408-1491911889:119585..121087 | TCONS_00022255-exon-sc0000408-1491911889:119585..121087 | Clytia hemisphaerica | exon |
| TCONS_00022255-exon-sc0000408-1510915933:119585..121087 | TCONS_00022255-exon-sc0000408-1510915933:119585..121087 | Clytia hemisphaerica | exon |
| TCONS_00022255-exon-sc0000408-1575043694:119585..121087 | TCONS_00022255-exon-sc0000408-1575043694:119585..121087 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408 | supercontig | sc0000408:119585..121087 . |
Blast
The following BLAST results are available for this feature:
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