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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022107 ID=TCONS_00022107|Name=TCONS_00022107|organism=Clytia hemisphaerica|type=transcript|length=1850bp
tattgctatacaatgaaaaataaattacgCATTGATAAATAACAGTTATA
TCATTCAAAATATATATGACGTGGAGGTTTTTCCTATTGCCATAAATCTG
GTTCAGAATACACAAGAATCTTTTTGATTGTCAACGATGATTTGGTATTA
TGGTCTGGTGACAGTGTTGTTTGTTTCGAGTTGGATTTCAAAATCTCAAG
GTACTGTGGACCAACATCTTATCCAACAAATGTCAGAACTTCTTCAATTT
GAAAACAATTGTACTGAAACTCTAAAGAATGCTATAATATCCGCTAAAAA
TCTTCAGCAGGACCCAAACTATagattattgaaaaatattttcaaaaaca
acaatAGCAAAAAGTATTTCAAATTACCACGAAACAGTCATCTTTATGGA
TCGTTCCATGAACTTTCAGGAGGCTACAGTGCTAGGCTATTCCAATCTGT
TGGCACTTTACAAAAAACGTGTTCCATTCTGTCTAATTCAACTGTGAATT
CTTGCATAGACCGAAGGGTAGATACTAGACTATCAGAAGATCAATGGGTT
GATATAGATCATGCGCTTTACGTAGATATACCATCCAGTGCAAAACTCTT
AATTTCAGACGTACCAGCAAAACGAGGCTATGTAACAATCAAAAGCTCTG
ACCGAATTTTACGCAAAATGACGAAAGACAAAAAGGAGAAACGCGTAAAA
CTTGTTAAAAAGTTTGTAACAGTAGATGGTTATTTAAGCAGTGTTAAACT
TATTGACAACACTTATAGGAATAATGCAAGAGGATTGAAGCTCAAGAATG
GATATTTAGAACCAATCATAcaggatatttttgaaaaagatgtgTCTTAT
AAAGCTAGCActtcaaagtcaagacggctTATATTATATGAATTAACTTG
GAGAGAAACTATTAAAATGAATAATGATCGAAGAGAAAATAAAAAGGATG
GTCAGGTTGAACCCTCACAGTATTACCAGCAAGATGTTTGGAGGGTTAAG
TCAAACTCCATTCATCTTTTCAGGACCCAATGGTGGCCTACTGTTGCCAA
CGAATGGAAAACACGTGACCGCGCATGGCCAAAGAAAGAATTGATTCATC
AAATGACACGTTATGCTTTTCTCAAACCGACCAGCATTGATAAACATTTT
AAATATAGATTCACCCACATTGAGAAGTTACTTACAGGCTTGCGGACTCC
TGATCAAAATCTAAACTTGTTTATcttgaaagttttattttataaatttg
tGAAACCCATCTCTCCTAATACACTACAAACATTCACCGTTAAATCAACT
ATGATGTGGGCGTGCGAACAATATCCGCCCGACCACCCTTGGTGGAAAAT
TGATAAAGGTTGTACACCCTTAAAAATGGTGTATTACATGCTCGAGAGAA
TGAGGGTTGATTTTCAACGCGATCATTTGGCTGACTATTTTTTACCTTCC
AACAACGTTATAAAACGAACGTCTGATGCGACTCGTCGGAAAATCGTAAA
TGTTCTAACCGAACTCATCCAGACTAGAAACTTACTCACTCTAATCTCTT
CGGACGATATAGCAAATGCTAAAAATATAATCGCTCGGacaagaaaaact
ttaaaaacagcTGACGATTTTGTACAAAAAGGTTTGGAAGATGGACTTTT
AATCACATTGTCTCGAAAACCAAAATTGCTTGTTCGATTGACCAAAAATA
AAGTTCGAAATCGGATTAAAAAATCGGGTTTATTATCCAAAATAGGTTAC
ATTTTGTTTGTGACGAGTTTCCCGATTTTATGTggtcttttttattgttt
tataaccaaatttgttttaaaaagaaaataattttatgtttaaatctttc Run BLAST on NCBI protein sequence of TCONS_00022107-protein >TCONS_00022107-protein ID=TCONS_00022107-protein|Name=TCONS_00022107-protein|organism=Clytia hemisphaerica|type=polypeptide|length=564bp
MIWYYGLVTVLFVSSWISKSQGTVDQHLIQQMSELLQFENNCTETLKNAI
ISAKNLQQDPNYRLLKNIFKNNNSKKYFKLPRNSHLYGSFHELSGGYSAR
LFQSVGTLQKTCSILSNSTVNSCIDRRVDTRLSEDQWVDIDHALYVDIPS
SAKLLISDVPAKRGYVTIKSSDRILRKMTKDKKEKRVKLVKKFVTVDGYL
SSVKLIDNTYRNNARGLKLKNGYLEPIIQDIFEKDVSYKASTSKSRRLIL
YELTWRETIKMNNDRRENKKDGQVEPSQYYQQDVWRVKSNSIHLFRTQWW
PTVANEWKTRDRAWPKKELIHQMTRYAFLKPTSIDKHFKYRFTHIEKLLT
GLRTPDQNLNLFILKVLFYKFVKPISPNTLQTFTVKSTMMWACEQYPPDH
PWWKIDKGCTPLKMVYYMLERMRVDFQRDHLADYFLPSNNVIKRTSDATR
RKIVNVLTELIQTRNLLTLISSDDIANAKNIIARTRKTLKTADDFVQKGL
EDGLLITLSRKPKLLVRLTKNKVRNRIKKSGLLSKIGYILFVTSFPILCG
LFYCFITKFVLKRK Run BLAST on NCBI transcript from alignment at sc0000405:18570..20746- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022107 ID=TCONS_00022107|Name=TCONS_00022107|organism=Clytia hemisphaerica|type=transcript|length=2177bp|location=Sequence derived from alignment at sc0000405:18570..20746- (Clytia hemisphaerica)
TATTGCTATACAATGAAAAATAAATTACGCATTGATAAATAACAGTTATA
TCATTCAAAATATATATGACGTGGAGGTTTTTCCTATTGCCATAAATCTG
GTTCAGAATACACAAGAATCTTTTTGATTGTCAACGATGATTTGGTATTA
TGGTCTGGTGACAGTGTTGTTTGTTTCGAGTTGGATTTCAAAATCTCAAG
GTACATGTATTTCTAATCTTTAGAAAAAGTTGATTTTTTTTACAGTTATA
GTCGACTCTCTCTAATTCGAACTTCTATTATTCAAATCTTTCTGTAATTC
GAATAAAAATACAGTTCCCCTCAGCTTGAAAGATCCTCTCCGTAATTCGA
ATGATTCCTTAATTCGAAGAAAACTTTTGGTCCTTTGAAAATCGAATTAG
AGAGTGTCTACTGTAATAAACTTACGGATGGGTCATAGACTTCCAATAAA
ATCGTCCACACAATTTTTGATTTGAAATGATTGTTAATTATCAAATCTAG
GTATATAATTATTTTTCTTTATGATAGGAACTGTGGACCAACATCTTATC
CAACAAATGTCAGAACTTCTTCAATTTGAAAACAATTGTACTGAAACTCT
AAAGAATGCTATAATATCCGCTAAAAATCTTCAGCAGGACCCAAACTATA
GATTATTGAAAAATATTTTCAAAAACAACAATAGCAAAAAGTATTTCAAA
TTACCACGAAACAGTCATCTTTATGGATCGTTCCATGAACTTTCAGGAGG
CTACAGTGCTAGGCTATTCCAATCTGTTGGCACTTTACAAAAAACGTGTT
CCATTCTGTCTAATTCAACTGTGAATTCTTGCATAGACCGAAGGGTAGAT
ACTAGACTATCAGAAGATCAATGGGTTGATATAGATCATGCGCTTTACGT
AGATATACCATCCAGTGCAAAACTCTTAATTTCAGACGTACCAGCAAAAC
GAGGCTATGTAACAATCAAAAGCTCTGACCGAATTTTACGCAAAATGACG
AAAGACAAAAAGGAGAAACGCGTAAAACTTGTTAAAAAGTTTGTAACAGT
AGATGGTTATTTAAGCAGTGTTAAACTTATTGACAACACTTATAGGAATA
ATGCAAGAGGATTGAAGCTCAAGAATGGATATTTAGAACCAATCATACAG
GATATTTTTGAAAAAGATGTGTCTTATAAAGCTAGCACTTCAAAGTCAAG
ACGGCTTATATTATATGAATTAACTTGGAGAGAAACTATTAAAATGAATA
ATGATCGAAGAGAAAATAAAAAGGATGGTCAGGTTGAACCCTCACAGTAT
TACCAGCAAGATGTTTGGAGGGTTAAGTCAAACTCCATTCATCTTTTCAG
GACCCAATGGTGGCCTACTGTTGCCAACGAATGGAAAACACGTGACCGCG
CATGGCCAAAGAAAGAATTGATTCATCAAATGACACGTTATGCTTTTCTC
AAACCGACCAGCATTGATAAACATTTTAAATATAGATTCACCCACATTGA
GAAGTTACTTACAGGCTTGCGGACTCCTGATCAAAATCTAAACTTGTTTA
TCTTGAAAGTTTTATTTTATAAATTTGTGAAACCCATCTCTCCTAATACA
CTACAAACATTCACCGTTAAATCAACTATGATGTGGGCGTGCGAACAATA
TCCGCCCGACCACCCTTGGTGGAAAATTGATAAAGGTTGTACACCCTTAA
AAATGGTGTATTACATGCTCGAGAGAATGAGGGTTGATTTTCAACGCGAT
CATTTGGCTGACTATTTTTTACCTTCCAACAACGTTATAAAACGAACGTC
TGATGCGACTCGTCGGAAAATCGTAAATGTTCTAACCGAACTCATCCAGA
CTAGAAACTTACTCACTCTAATCTCTTCGGACGATATAGCAAATGCTAAA
AATATAATCGCTCGGACAAGAAAAACTTTAAAAACAGCTGACGATTTTGT
ACAAAAAGGTTTGGAAGATGGACTTTTAATCACATTGTCTCGAAAACCAA
AATTGCTTGTTCGATTGACCAAAAATAAAGTTCGAAATCGGATTAAAAAA
TCGGGTTTATTATCCAAAATAGGTTACATTTTGTTTGTGACGAGTTTCCC
GATTTTATGTGGTCTTTTTTATTGTTTTATAACCAAATTTGTTTTAAAAA
GAAAATAATTTTATGTTTAAATCTTTC Coding sequence (CDS) from alignment at sc0000405:18570..20746- >TCONS_00022107 ID=TCONS_00022107|Name=TCONS_00022107|organism=Clytia hemisphaerica|type=CDS|length=3390bp|location=Sequence derived from alignment at sc0000405:18570..20746- (Clytia hemisphaerica)
TGTGGACCAACATCTTATCCAACAAATGTCAGAACTTCTTCAATTTGAAA
ACAATTGTACTGAAACTCTAAAGAATGCTATAATATCCGCTAAAAATCTT
CAGCAGGACCCAAACTATAGATTATTGAAAAATATTTTCAAAAACAACAA
TAGCAAAAAGTATTTCAAATTACCACGAAACAGTCATCTTTATGGATCGT
TCCATGAACTTTCAGGAGGCTACAGTGCTAGGCTATTCCAATCTGTTGGC
ACTTTACAAAAAACGTGTTCCATTCTGTCTAATTCAACTGTGAATTCTTG
CATAGACCGAAGGGTAGATACTAGACTATCAGAAGATCAATGGGTTGATA
TAGATCATGCGCTTTACGTAGATATACCATCCAGTGCAAAACTCTTAATT
TCAGACGTACCAGCAAAACGAGGCTATGTAACAATCAAAAGCTCTGACCG
AATTTTACGCAAAATGACGAAAGACAAAAAGGAGAAACGCGTAAAACTTG
TTAAAAAGTTTGTAACAGTAGATGGTTATTTAAGCAGTGTTAAACTTATT
GACAACACTTATAGGAATAATGCAAGAGGATTGAAGCTCAAGAATGGATA
TTTAGAACCAATCATACAGGATATTTTTGAAAAAGATGTGTCTTATAAAG
CTAGCACTTCAAAGTCAAGACGGCTTATATTATATGAATTAACTTGGAGA
GAAACTATTAAAATGAATAATGATCGAAGAGAAAATAAAAAGGATGGTCA
GGTTGAACCCTCACAGTATTACCAGCAAGATGTTTGGAGGGTTAAGTCAA
ACTCCATTCATCTTTTCAGGACCCAATGGTGGCCTACTGTTGCCAACGAA
TGGAAAACACGTGACCGCGCATGGCCAAAGAAAGAATTGATTCATCAAAT
GACACGTTATGCTTTTCTCAAACCGACCAGCATTGATAAACATTTTAAAT
ATAGATTCACCCACATTGAGAAGTTACTTACAGGCTTGCGGACTCCTGAT
CAAAATCTAAACTTGTTTATCTTGAAAGTTTTATTTTATAAATTTGTGAA
ACCCATCTCTCCTAATACACTACAAACATTCACCGTTAAATCAACTATGA
TGTGGGCGTGCGAACAATATCCGCCCGACCACCCTTGGTGGAAAATTGAT
AAAGGTTGTACACCCTTAAAAATGGTGTATTACATGCTCGAGAGAATGAG
GGTTGATTTTCAACGCGATCATTTGGCTGACTATTTTTTACCTTCCAACA
ACGTTATAAAACGAACGTCTGATGCGACTCGTCGGAAAATCGTAAATGTT
CTAACCGAACTCATCCAGACTAGAAACTTACTCACTCTAATCTCTTCGGA
CGATATAGCAAATGCTAAAAATATAATCGCTCGGACAAGAAAAACTTTAA
AAACAGCTGACGATTTTGTACAAAAAGGTTTGGAAGATGGACTTTTAATC
ACATTGTCTCGAAAACCAAAATTGCTTGTTCGATTGACCAAAAATAAAGT
TCGAAATCGGATTAAAAAATCGGGTTTATTATCCAAAATAGGTTACATTT
TGTTTGTGACGAGTTTCCCGATTTTATGTGGTCTTTTTTATTGTTTTATA
ACCAAATTTGTTTTAAAAAGAAAATAAATGATTTGGTATTATGGTCTGGT
GACAGTGTTGTTTGTTTCGAGTTGGATTTCAAAATCTCAAGGTACTGTGG
ACCAACATCTTATCCAACAAATGTCAGAACTTCTTCAATTTGAAAACAAT
TGTACTGAAACTCTAAAGAATGCTATAATATCCGCTAAAAATCTTCAGCA
GGACCCAAACTATAGATTATTGAAAAATATTTTCAAAAACAACAATAGCA
AAAAGTATTTCAAATTACCACGAAACAGTCATCTTTATGGATCGTTCCAT
GAACTTTCAGGAGGCTACAGTGCTAGGCTATTCCAATCTGTTGGCACTTT
ACAAAAAACGTGTTCCATTCTGTCTAATTCAACTGTGAATTCTTGCATAG
ACCGAAGGGTAGATACTAGACTATCAGAAGATCAATGGGTTGATATAGAT
CATGCGCTTTACGTAGATATACCATCCAGTGCAAAACTCTTAATTTCAGA
CGTACCAGCAAAACGAGGCTATGTAACAATCAAAAGCTCTGACCGAATTT
TACGCAAAATGACGAAAGACAAAAAGGAGAAACGCGTAAAACTTGTTAAA
AAGTTTGTAACAGTAGATGGTTATTTAAGCAGTGTTAAACTTATTGACAA
CACTTATAGGAATAATGCAAGAGGATTGAAGCTCAAGAATGGATATTTAG
AACCAATCATACAGGATATTTTTGAAAAAGATGTGTCTTATAAAGCTAGC
ACTTCAAAGTCAAGACGGCTTATATTATATGAATTAACTTGGAGAGAAAC
TATTAAAATGAATAATGATCGAAGAGAAAATAAAAAGGATGGTCAGGTTG
AACCCTCACAGTATTACCAGCAAGATGTTTGGAGGGTTAAGTCAAACTCC
ATTCATCTTTTCAGGACCCAATGGTGGCCTACTGTTGCCAACGAATGGAA
AACACGTGACCGCGCATGGCCAAAGAAAGAATTGATTCATCAAATGACAC
GTTATGCTTTTCTCAAACCGACCAGCATTGATAAACATTTTAAATATAGA
TTCACCCACATTGAGAAGTTACTTACAGGCTTGCGGACTCCTGATCAAAA
TCTAAACTTGTTTATCTTGAAAGTTTTATTTTATAAATTTGTGAAACCCA
TCTCTCCTAATACACTACAAACATTCACCGTTAAATCAACTATGATGTGG
GCGTGCGAACAATATCCGCCCGACCACCCTTGGTGGAAAATTGATAAAGG
TTGTACACCCTTAAAAATGGTGTATTACATGCTCGAGAGAATGAGGGTTG
ATTTTCAACGCGATCATTTGGCTGACTATTTTTTACCTTCCAACAACGTT
ATAAAACGAACGTCTGATGCGACTCGTCGGAAAATCGTAAATGTTCTAAC
CGAACTCATCCAGACTAGAAACTTACTCACTCTAATCTCTTCGGACGATA
TAGCAAATGCTAAAAATATAATCGCTCGGACAAGAAAAACTTTAAAAACA
GCTGACGATTTTGTACAAAAAGGTTTGGAAGATGGACTTTTAATCACATT
GTCTCGAAAACCAAAATTGCTTGTTCGATTGACCAAAAATAAAGTTCGAA
ATCGGATTAAAAAATCGGGTTTATTATCCAAAATAGGTTACATTTTGTTT
GTGACGAGTTTCCCGATTTTATGTGGTCTTTTTTATTGTTTTATAACCAA
ATTTGTTTTAAAAAGAAAATAAATGATTTGGTATTATGGTCTGGTGACAG
TGTTGTTTGTTTCGAGTTGGATTTCAAAATCTCAAGGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00022107-exon-sc0000405-1575043694:20543..20746 | TCONS_00022107-exon-sc0000405-1575043694:20543..20746 | Clytia hemisphaerica | exon |
| TCONS_00022107-exon-sc0000405-1575043694:18570..20215 | TCONS_00022107-exon-sc0000405-1575043694:18570..20215 | Clytia hemisphaerica | exon |
| TCONS_00022107-exon-sc0000405-1510915933:20543..20746 | TCONS_00022107-exon-sc0000405-1510915933:20543..20746 | Clytia hemisphaerica | exon |
| TCONS_00022107-exon-sc0000405-1510915933:18570..20215 | TCONS_00022107-exon-sc0000405-1510915933:18570..20215 | Clytia hemisphaerica | exon |
| TCONS_00022107-exon-sc0000405-1491911889:20543..20746 | TCONS_00022107-exon-sc0000405-1491911889:20543..20746 | Clytia hemisphaerica | exon |
| TCONS_00022107-exon-sc0000405-1491911889:18570..20215 | TCONS_00022107-exon-sc0000405-1491911889:18570..20215 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000405 | supercontig | sc0000405:18570..20746 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR024810 | Mab-21_dom |
Blast
The following BLAST results are available for this feature:
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