TCONS_00022100 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022100
Unique NameTCONS_00022100
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2475

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022100 ID=TCONS_00022100|Name=TCONS_00022100|organism=Clytia hemisphaerica|type=transcript|length=2475bp
GTCCTACTAGAAGAAAAGCCTCCAGTAAAAAGatAAAGACTGATAAAGAT
GAACATGTGCAAAGTGAAGATGAGACACCGATTCAAGAAGTagaagaaaa
aatcaacaaTAATGAGGATGAAGAGGAAGATTTTGAAGAATTCTCCACAA
ACGATTATCAACTATCAGAATTGGAATTACTCagaaaagaaaacatgaaa
aagaattttcagctGTTTGAAGAATTCCAAATAAACAAGGTAAAGGATGA
AGTAAAAGAACTGGCAAGACCTAAGTTAAATGTTGTCGGTATCAAGAGAG
AAAAGAGAAAAGCCACCCAAAGAAATTTTACCAAGAAGAGTATCATTAAG
AATTCGAAAGCTTGAAGCACATGATTCCATAAACATTGAAGATTACGTTC
CCTTATCTACAtttcaaaattaccaaaaacaaCAGCAACATAATTATCAT
GAACGAAAAGAAGAAACTGTCAAGATGACAAAAGAGGATGACGAATCGAA
TTATTCAGAAATCATACAAACTTGGCTTGAAGAGAAACCAGGTACTGTGA
AGCAAGAAGCATCAGAGGTTGAATTTTCAAATTATAGTAAGGAAATCAAC
AGCCTATTCGTCAGCAACTGTGGGAAAGTGACCAAGTCCAGAATCTGCTC
TATTGCAATTCATCCTTCAGAATCTAAAACGATAGCTGCTTTTGGGGACA
AGCAGGGTGCAGTTGGTATTTGGGATGTGGGTTCTAATGCGCAATGTAAA
GGCTATCCCGCATCGGAAGAAGTATTGGTTTTTGAGCCACACTCAAGTCC
AATCAATTGTTTGAAATTCCGCACAGATGATTGCACTAAATTGATGTCTT
GCAGCTACGATGGTACATTGAGGCAGGGAGATTttgcaaaacaaaagttt
aCACAGGTGTTTGCCTTTGATGATAGTGATAACAGATGTTATTCGTTTTC
AAACCCTTTGAACAAACCAAACATCTTTCTTCTGTCCACGTCTGAAGGTA
GTGTGGCATTGATCGATTCAGTCAGTGGGAAAGCAGAAATGGAATCGTTC
ATTTTGCAGAAAAATGTCAAGTGTATAGACTGCCATCCTTCAAATGAATA
CATATTCGCAGCTGTTGGCCATGATGGcaCAATGGGCACTTGGGATATTA
GAAATTTGAAAACCAAAGGCACAAGTAATCCAATTTTTGTTGTAAAGTCT
TTCAAGACTGGAAGTGGTTTATATTTTTCGCCTGGAACAGGGAACAAGCT
TGCATACACATCAAATGATGACACAGTCAGGATTTTCGATGTGAAGAAAA
GTggtgaattttcaaaatcagcTTCGTGGACTTTGAAGCATGACAACCAT
ACAGGAAGGTGGTTGACACCATTCCGTGCAACGTGGGATCCCAAGACTGA
GAACTGTTTCGTTATCGGTAGTATGGGTCATCCGAGAAAGTTGGACGTGT
ACAGTTGTGTAGGACCCGGGCGTTTAGAATGGATCCCTTTACGTGATGAC
AATTTTGGAACAGTTGGTTCAGTTAATGCTTTTCATCCAACTAAAAACAT
TCTTATCTCTGGAAATTCAAGTGGCAAAGCTCATGTTTGGTCATGATGAT
TTATTTTGATCATTTGAAATTCTACTTTCAATAACAGAAGAAATAGTCTT
CGGGTCTTTCTTCTCTGATTATACAAACACAGTCTTGAACGTTGTATAGT
GAACTGTTTGACCTTCAATCGTTGTGACTGTATGATATTCCCCTACACTT
TACCTATTGTCCTCACGAGATATCCTGTTTTTCGAAATATATTTCTCcct
cgttttttttttgcatggaaATAACCTTGATTTTGTCTCATTTTCTCAAT
AAGATATTCTTAATTCTGTGGAGTGATATATATATTATTGGTTTCGCTCT
GCTCTGCTCTCTCTCCCTCGATTTCCCCTATCATTCACCCTTCTGTCCAA
CCTTTTTACACTATCTTTTTCTTTGAGTAAATCCTTGTACTAACATTGAa
ccaaggtttttgtttttaattttgttttgtagcgcatatttattttttag
cagaaaaaaagttgaacgcTCGTCTCAACTTTCCGTGCATAGTGGTTGCA
TAACGTTCAGTTTAAATTTATTTGGTTTTCCCTCATATTCATAATGGAAA
AAACGTCCATTTTAAAAAGAGACGAACCAATTCAATTGCTGTGCTCGTGG
AGTTGTGACTGGCCTCAAATGTAAATATTTTATCTTCTTTTAACATCAAA
TGTTATATACATACCTAATGAAAAGTTTATATTTTGTGTATTATACAATC
GACGTGAGTTTATACCCTTAACCTTAATATTTGATCACTTATAGAAACTA
TATGTATTTTacctatttttttgttttatcattttatttggTTATTCAAG
AAAAAAGACGGTCAGACTTGTTTTACTACTTCGAGAGCTTCTCCTTGGAC
TCTCAGAATACTAAATTGTTACCCT
Run BLAST on NCBI

transcript from alignment at sc0000405:202290..210978+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022100 ID=TCONS_00022100|Name=TCONS_00022100|organism=Clytia hemisphaerica|type=transcript|length=8689bp|location=Sequence derived from alignment at sc0000405:202290..210978+ (Clytia hemisphaerica)
GTCCTACTAGAAGAAAAGCCTCCAGTAAAAAGGTAACCGTTTATTGTTAC AAATTTTCAcaaattgttcctataaaattaggctacgtcatatcttcctt cgtttcgagcgtaaaactcctactcttcgggctatgagcactcctcttgt tttgaatattgaaattccccagataaatcgcatgcgcactgaggttttaa tgaaacaatagagagtttcgaaacctaagccaatcagctgtgttttaaac attcttttatttaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNtgataaa catcttttgtgaatgttgtctattatgtttaaacctattaataagcaatt cccggtgggggtcactagtggccgcctatagcagtgcctatagaccaaga gtaaggcctaaaagcctggatctgtctattgcgTAGACTATATAAAATTG GCTTATTTctaaattctttcatttcaaatacgttttgaaatttgaagCCT TCAGGTCGTTAATGAAGTTATTTGTTACTACTGTATGAtgaattctttca ttttattctcttcttttgttctttttttcttcaagatAAAGACTGATAAA GATGAACATGTGCAAAGTGAAGATGAGACACCGATTCAAGAAGTagaaga aaaaatcaacaaTAATGAGGATGAAGAGGAAGATTTTGAAGAATTCTCCA CAAACGATTATCAACTATCAGAATTGGAATTACTCagaaaagaaaacatg aaaaagaattttcagctGTTTGAAGAATTCCAAATAAACAAGGTAATAAA GTAAGACGATCTTGGAGAATGGTCTGATTGTATGGCTTTATTCATTTTAA GAttgtgAAAGGTGAGTATTAACAAACTGACTTCGTTCAAAACTGGCATT ATTTACTATGCCAGGGTGCAAAATCTTGTTCAAAGTTGACATTATTTACT TTGCTAGGTAAAGGATGAAGTAAAAGAACTGGCAAGACCTAAGTTAAATG TTGTCGGTATCAAGAGAGAAAAGAGGTATTTATTGACTTTTTACATGGAC AGAATTCCAACTACTTGTGAATATCCATTCTCTAACATATAAAAGGGATG CCATTtgtaaaacaagaaaaattaaaaattcactaaattACAAATCATAA GACTGATAGACCCTTAAGAATCATATTACTTTTTTGTGAGTAAACGATCT ACAAATTAAGgtcaattatttttatttttctattcttttgaaacaattta tatttttaacgcCTAGAGAAAAGCCACCCAAAGAAATTTTACCAAGAAGA GTATCATTAAGAATTCGAAAGCTTGAAGCACATGATTCCATAAACATTGA AGATTACGTTCCCTTATCTACAtttcaaaattaccaaaaacaaCAGCAAC ATAATTATCATGTAAGTACAATACTGAATAAAAgttaaaattctcaaatt taaTAAAGTATTTCTAAAGGGTTCTCCTTGACAGTAACCTGAAATCAGAT TGTAATTATGTTTTCTGCCTGCACTACattaaagctctaaagggatgggt gttATACAAACAATCTGATAAAATATGCTATctcaaatttgaaaggactg cACTCGTCTAAttaggactgggaatgacaacaaagttgagTGATTGTGTT TAAAAATAGGGCGCTGTATCAGGAAAATTTGGTGtttgactttccggcgc acaacaagattcttgttgtagaattttccgcgggaggactattttcctca gatggttaattttcaagggccttcagaggtttaccatgcccttaagaaaa ttatgaccagcGGTTATCAGGTTACTTGACAGGGACTGagaattatttaa aattttggaacTTTACCCTTCAGTTTTTTATCTAATAAGTCACTGTCAAT CCTTGCTGCATGGTATAAGTAATTCTTTTGAGATTGTCTAGACGATACAA TTTTGTATCTCTTTTGTTTGGATTGAATAGGAAGTTTGTTTCTTTCAGAA CGTTCTGGGGCAATGACCAGAGTATTTTCCTTAACTACAATTGATAgtgt attttattatttttcttttacagGAACGAAAAGAAGAAACTGTCAAGATG ACAAAAGAGGATGACGAATCGAATTATTCAGAAATCATACAAACTTGGCT TGAAGAGAAACCAGTAGCTTACTTTTTgcattttattttatgattttcat taCAAGTATATTTTTTCAAGGAGATATTTGTAACTCTTTAGCTAATATTT ACTTTTCTCCTTTTGTTTTGATCAGGGTACTGTGAAGCAAGAAGCATCAG AGGTTGAATTTTCAAAGTAAGTTGAATATGTCATTAAACTTGATCATTAT ATTTTTAAACCATTATTGACCTATCTTTTGTAAACACTTTTCTGTCATGT ACTGGATAGTACAGATTTGTTAAGGTAATTTTGGCTATTATCAGCTACAA AATTGATCTTAATTATGTTACATTTCAGTTATAGTAAGGAAATCAACAGC CTATTCGTCAGCAACTGTGGGAAAGTGACCAAGTCCAGAATCTGCTCTAT TGCAATTCATCCTTCAGAATCTAAAACGATAGCTGCTTTTGGGGACAAGC AGGGTGCAGTTGGTATTTGGGATGTGGTAATTCTATGATTTGGATTGTGT CTGAAATTTCTTTATCATAAGCATAtctttcatcattttcttttgttgGA CACCAGGTTTTTGAGGTAGATTTCAAGCAACAACAATAGAANTTTTAtct ttcatcattttcttttgttgGACAAATCGACAGAGGTAGATTTCAAGCAA CAACAATAGAACATCACATCCCCATTGCCTCTCTTCTCTTTAATTCTTTT CCTTTGTATTGTTTTGCTCGGATAACAGAAAAGAAAGatgtgaaatatct ttaatcAAAGCTCCTTCTCTACTATCTGAAATGAAGAATTTTGATAACTT GTCAATAGAGTGCTCAATACAAACAAATAAGCAATTTAAAATACCTTCAT CTCAAAAATGAGGGTTttagatgtttttcttttagatgaagatattttaa atctATTATCTATTGTCTACTATCTGAGGTACTCAAAGAACTTATTACAC CATCAATTTTTTCCTCCAGGGTTCTAATGCGCAATGTAAAGGCTATCCCG CATCGGAAGAAGTATTGGTTTTTGAGCCACACTCAAGTCCAATCAATTGT TTGAAATTCCGCACAGATGATTGCACTAAATTGATGTCTTGCAGCTACGA TGGTACATTGAGGCAGGGAGATTttgcaaaacaaaagtttaCACAGGTTT tcagtttgtttatttttcttaaatttaatGAATGCTCTTAACAATTTTTT ACTCACATGGAAATAGAATAGTAATAGTTGTCGCCCAGTACCGAATACAA TATGGTTTTAGTATAAGTGCAAACTGGTTTAttgtcaacttgaaaaatat caaaaattttctctatttgtgtcattttctttgtttttttttacaagctG TTTTTCAATTCCtgcattttggtaaaatcaacATTATTCGAAAATGATGC GAATGGCGTTTTTAGTCAATCAGATTGCTTATTTTCTTCATGCTGACGTT AATAAATACACTGTTACTGTTTTATTAATGTTTATAATTTCATAGTAAGT ATATCAGGATCAACACCTTACATTTATATTTATGAAATATTAAAGCTTAG CCAATTATTATACAAATTTCCTTAATCGTTTTCAGGTGTTTGCCTTTGAT GATAGTGATAACAGATGTTATTCGTTTTCAAACCCTTTGAACAAACCAAA CATCTTTCTTCTGTCCACGTCTGAAGGTAGTGTGGCATTGATCGATTCAG TCAGTGGGTATGTTCAAGTTTTATCTTATGTTTATGTTATCGGCATACAA TCATACAATATCATACAATTtaatctttttatcaaaattggcatAAAATA GCATAAAATATAAGTTCTTGGCATACTGAGcataaaatttgaccaaaaag cCAGAAATTTTTCCTAAGGCAAGAAACTTTGTAGATCGACATAAAACCAA TTCACTGAACTTAGTTCTAGGTCCAATCTTTTATCTAGGAATagattttt attgtaaaatttatttatatatatacAGATATATATGGTGATGAGCTtta tttttgctcaaaatattTATTAGTTTTTCTATATGGGTTTTTGCAAAagg ttttaagaattttgtcaGCAAAAAGGTTCCAGACTGATTATTTCATAGTC ATAGAATTTCAGAAAGGTTTCTTCCTGCAAAGTACATTTCGTTTCTGTGA cgcaaaaagaagatttttaaggTTAATTTAGACTAACAAGTAGCCTAGAG GCTTGAAGGCCCAGCATAAAGTGTAATGAGAATTTGTGCATTTATTATCA ATAATCGAAAGTAGCCAGTGAGGCGATcctttttaagggctctgaccata gtgaaaaatcaatttcagaatttgaagataaaaccttatagTGGATGGCC CCTAGAACGGAGGTCAAAAATGAAATCGCTCTGGTGACTTCAAAAATAGA TGAATCTAAAATGGTTTTCCTCCAAAACAAACTTCAGCCTCTCTATTTTC CTTCCCAAGAgagttttttcaaacatttttaagtCAGACACATTTTTTGT TGACTCAAAGTTTAGTCACTTTTTCTCAATGGCCCCTAGAACGGAAGTTT AGAATTTTAGCAATTTCTCATGATCTACGGTAgatatcaaaatgaaattt ttaccgTAGTTTTGAATTGTGATTTCGAATATGATGAGGGTAAATTAATT CGGTAAAATTTTTACTATCATACTAATGGTCGTTAGAATGGAGGTTTGTG GCCCCTAGAATGGAGGTTTTGTTGAAAGGAACCAAACATTTAAAAttgga aattccaaaattttataaaaccgattttttacataatgacgtcaatatct atttttaaagaatttttttccaaataaaatatgaaattcaGCTATGGAGT ATAATGTCAAAACTTTATGACGAAAGCTCAAGTCAATCATCATTTTAGTC TGCTACAACAACCTTTAGACCTtttgaaaaaacgtttttctttttgttat tgtctttatcatttttgtattatttttatatattcTTTCGTTTTATGGGT TGAGACCTAATCCATGATATTAGGATTGTTGAAGTTTTTGAGGAAAGATT TTTAgcataaaataatcaaaatttgaagaaagagCATACAATTTGGCATA AAATCTGACTAATTTTGGCATAAAAAATCATACAATTTGGTCATTTTTTG GCATAAAATCATACTATAatagggatttttagagtgtgaCCCCTGTGTTA TGTTATCTCATCTCATTTGTGGCAATTCTAAGACATTCTTAGCATTGAAT TAAAACAGATTTGCTGGAATTCACTTATCTCAGTgatataaaaaacaaat ttctatTCTTTTTTTTAGGAAAGCAGAAATGGAATCGTTCATTTTGCAGA AAAATGTCAAGTGTATAGACTGCCATCCTTCAAATGAATACATATTCGCA GCTGTTGGCCATGATGGGTGAGAATCATAGTCatcatttcacagtcgaaa tgaatcatgggtaatcaggactgattgtgCTCTATTAACAACTTCCGGTT GGCTAGAcaaaaaagtcttcaaaaagtttcaaaacttttgaccaatagta agtcttctttagcgcgcagtggtcctgattatccattacgctttgcgact gtcaAATGGCCTATTGGTGTGATTGTCTAATTAGGGGTagaaattaaaaa gttttttgttttagagtGAGAAAACCTCAACAAGGGGAGATAAGACAGGC GGGCTGGATATTTAGATGAAAATTACCTTGCTTGAAAAGTGTAAAACAGC AAAATAAAAGCTctaatttaaataaaatatattttgttttttttcagcaC AATGGGCACTTGGGATATTAGAAATTTGAAAACCAAAGGCACAAGTAATC CAATTTTTGTTGTAAAGTCTTTCAAGACTGGAAGTGGTTTATATTTTTCG CCTGGAACAGGGAACAAGCTTGCATACACATCAAATGATGACACAGTCAG GTACTGTTTTGATCATAACACTTTAAAAACGTGttaaaatctgcaaaatc tcatagaatgcaccccctgagcttagggggggggctaagccaattttgct tgattgggggctgtatttttcaaaaaatactgggggctaGGTTGCTAggg gggctgagtgttgtgtaataaaactgggggcagagctgatagtttgaaga tattttaaattatgttaaaaatctatgctgtggggaaggttttatTTGTC TGCGACGCAATAAATTTATCGAGAATTTGCATGCAAAATTCCTTcgatat tttgctttgtgaagTTGGTTTttagccgcccccccccccgaaaaatGCTG AGGGCTGGACCCCTCTATGAATCTCTTATTCAATAGTTACCCCAGGGTCC ACTAAGGGCTTTATAATTTGGTTGGCGCAATTAAGTGGACTCGGCGtcgt caaaaaaagattaagGTCAGATTTGTATCAGCTTTGTTCAAATTTTGGAA TCAAAGaatatcattttttgaaatttctgtttACTTTAAGACTGTTCATC TCAATTTTGATTTCAGGATTTTCGATGTGAAGAAAAGTggtgaattttca aaatcagcTTCGTGGACTTTGAAGTAAGAGTTGTATTTGAGTTTGATAAT TTTGAAACGTCGCTATCTCCTGACTCATTCCCTTGAGAATGATTTTCACT TATGATAGCAAAACGAAAATGCTTTCTTCTCACTGTCAGACTGAAGTACT TTTGAATGATTTATTTTACAAGCCcgtttcattattttttgataGTGAAC CGACTTTAATATGTTCACTCGTGTTTACCACTATTGGGTACCTTGTTTAA TTTGTAGGCATGACAACCATACAGGAAGGTGGTTGACACCATTCCGTGCA ACGTGGGATCCCAAGACTGAGAACTGTTTCGTTATCGGTAGTATGGGTCA TCCGAGAAAGGTTTGAATTCTTATTATTCTGTTgaaacattttgttttat aaattcTCTCTCTGGCAAATATTAATTGCTACCTTAAAGACACtccaaat attttatttttctttaaaaagtttgAGTTTGTAAGAGATTACATCTTGTA GAGTATTCAATGAAAGTTACTTGCATAACAATTAACTGTGATAGGACTTT AGGGTCTATCATAGGCTGCACGCCTCATATAGGGGATGCATAAAATTCTC GTTTGAGTCTtcgtgtttttgagttttagaaacttgattacCTTGATTAG TAAGTCCTATATGAGaattctttaaatttcattaaatttcaattaaaact ttgaaTGACTTGAGGTTAAaaatacaatcattggatttctgaacctttta agaaaattgaaacaggttaccCCAATATTGCGGTAACTCTCGGGCAGGGA TTTTGTACATCCCCAGAATTGATTTTTATATAggggatgcgcgcagccta tGCCTATCAATAAGAAGGAAATCCAAAATATTGATAGACTTAAAAGGTAA ACTACTTATTCCAGTCttcttttttatcttcattctTATTTGTCTTTGTT CTAGTTGGACGTGTACAGTTGTGTAGGACCCGGGCGTTTAGAATGGATCC CTTTACGTGATGACAATTTTGGAACAGTTGGTTCAGTTAATGCTTTTCAT CCAACTAAAAACATTCTTATCTCTGGAAATTCAAGTGGCAAAGCTCATGT TTGGTCATGATGATTTATTTTGATCATTTGAAATTCTACTTTCAATAACA GAAGAAATAGTCTTCGGGTCTTTCTTCTCTGATTATACAAACACAGTCTT GAACGTTGTATAGTGAACTGTTTGACCTTCAATCGTTGTGACTGTATGAT ATTCCCCTACACTTTACCTATTGTCCTCACGAGATATCCTGTTTTTCGAA ATATATTTCTCcctcgttttttttttgcatggaaATAACCTTGATTTTGT CTCATTTTCTCAATAAGATATTCTTAATTCTGTGGAGTGATATATATATT ATTGGTTTCGCTCTGCTCTGCTCTCTCTCCCTCGATTTCCCCTATCATTC ACCCTTCTGTCCAACCTTTTTACACTATCTTTTTCTTTGAGTAAATCCTT GTACTAACATTGAaccaaggtttttgtttttaattttgttttgtagcgca tatttattttttagcagaaaaaaagttgaacgcTCGTCTCAACTTTCCGT GCATAGTGGTTGCATAACGTTCAGTTTAAATTTATTTGGTTTTCCCTCAT ATTCATAATGGAAAAAACGTCCATTTTAAAAAGAGACGAACCAATTCAAT TGCTGTGCTCGTGGAGTTGTGACTGGCCTCAAATGTAAATATTTTATCTT CTTTTAACATCAAATGTTATATACATACCTAATGAAAAGTTTATATTTTG TGTATTATACAATCGACGTGAGTTTATACCCTTAACCTTAATATTTGATC ACTTATAGAAACTATATGTATTTTacctatttttttgttttatcatttta tttggTTATTCAAGAAAAAAGACGGTCAGACTTGTTTTACTACTTCGAGA GCTTCTCCTTGGACTCTCAGAATACTAAATTGTTACCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012393XLOC_012393Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022100-exon-sc0000405-1491911889:202290..202321TCONS_00022100-exon-sc0000405-1491911889:202290..202321Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:202290..202321TCONS_00022100-exon-sc0000405-1510915933:202290..202321Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:202290..202321TCONS_00022100-exon-sc0000405-1575043694:202290..202321Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:202875..203081TCONS_00022100-exon-sc0000405-1491911889:202875..203081Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:202875..203081TCONS_00022100-exon-sc0000405-1510915933:202875..203081Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:202875..203081TCONS_00022100-exon-sc0000405-1575043694:202875..203081Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:203247..203314TCONS_00022100-exon-sc0000405-1491911889:203247..203314Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:203247..203314TCONS_00022100-exon-sc0000405-1510915933:203247..203314Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:203247..203314TCONS_00022100-exon-sc0000405-1575043694:203247..203314Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:203558..203700TCONS_00022100-exon-sc0000405-1491911889:203558..203700Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:203558..203700TCONS_00022100-exon-sc0000405-1510915933:203558..203700Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:203558..203700TCONS_00022100-exon-sc0000405-1575043694:203558..203700Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:204363..204452TCONS_00022100-exon-sc0000405-1491911889:204363..204452Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:204363..204452TCONS_00022100-exon-sc0000405-1510915933:204363..204452Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:204363..204452TCONS_00022100-exon-sc0000405-1575043694:204363..204452Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:204565..204605TCONS_00022100-exon-sc0000405-1491911889:204565..204605Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:204565..204605TCONS_00022100-exon-sc0000405-1510915933:204565..204605Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:204565..204605TCONS_00022100-exon-sc0000405-1575043694:204565..204605Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:204768..204915TCONS_00022100-exon-sc0000405-1491911889:204768..204915Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:204768..204915TCONS_00022100-exon-sc0000405-1510915933:204768..204915Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:204768..204915TCONS_00022100-exon-sc0000405-1575043694:204768..204915Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:205409..205585TCONS_00022100-exon-sc0000405-1491911889:205409..205585Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:205409..205585TCONS_00022100-exon-sc0000405-1510915933:205409..205585Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:205409..205585TCONS_00022100-exon-sc0000405-1575043694:205409..205585Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:206025..206146TCONS_00022100-exon-sc0000405-1491911889:206025..206146Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:206025..206146TCONS_00022100-exon-sc0000405-1510915933:206025..206146Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:206025..206146TCONS_00022100-exon-sc0000405-1575043694:206025..206146Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:207758..207856TCONS_00022100-exon-sc0000405-1491911889:207758..207856Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:207758..207856TCONS_00022100-exon-sc0000405-1510915933:207758..207856Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:207758..207856TCONS_00022100-exon-sc0000405-1575043694:207758..207856Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:208237..208389TCONS_00022100-exon-sc0000405-1491911889:208237..208389Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:208237..208389TCONS_00022100-exon-sc0000405-1510915933:208237..208389Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:208237..208389TCONS_00022100-exon-sc0000405-1575043694:208237..208389Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:208956..209012TCONS_00022100-exon-sc0000405-1491911889:208956..209012Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:208956..209012TCONS_00022100-exon-sc0000405-1510915933:208956..209012Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:208956..209012TCONS_00022100-exon-sc0000405-1575043694:208956..209012Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:209247..209349TCONS_00022100-exon-sc0000405-1491911889:209247..209349Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:209247..209349TCONS_00022100-exon-sc0000405-1510915933:209247..209349Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:209247..209349TCONS_00022100-exon-sc0000405-1575043694:209247..209349Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1491911889:209944..210978TCONS_00022100-exon-sc0000405-1491911889:209944..210978Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1510915933:209944..210978TCONS_00022100-exon-sc0000405-1510915933:209944..210978Clytia hemisphaericaexon
TCONS_00022100-exon-sc0000405-1575043694:209944..210978TCONS_00022100-exon-sc0000405-1575043694:209944..210978Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:202290..210978 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.056469 0 31.1292 30.5382 12.7686 11.2921 5.12503 4.90427 5.17398 3.94835 4.55119 5.61893 1.20478 2.31144 1.36697 0.945054 7.35478 7.12109 1.65446 0.691322 8.13184 8.84189 0.0491266 0 23.5898 21.6863 2.8836e-08 0 0 0
Blast
BLAST of TCONS_00022100 vs. Swiss-Prot (Human)
Match: WDR76 (WD repeat-containing protein 76 OS=Homo sapiens GN=WDR76 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.453e-56
Identity = 129/389 (33.16%), Postives = 199/389 (51.16%), Query Frame = 1
Query:  469 VKMTKEDDESN---YSEIIQTWL-EEKPGTVKQEASEVEFSNYSKEINSLFVS--NCGKVTKSRICSIAIHPSESKTIAAFGDKQGAVGIWDVGSNAQCKGYPASEEVLVFEPHSSPINCLKFRTDDCTKLMSCSYDGTLRQGDFAKQKFTQVFAFDDSDNRCYSFSNPLNKPNIFLLSTSEGSVALIDSVSGKAEMESFILQK--NVKCIDCHPSNEYIFAAVGHDGTMGTWDIRNLKTKGTSNPIFVVKSFKTGSGLYFSPGTGNKLAYTSNDDTVRIFDVKKSGEFSKSASW--TLKHDNHTGRWLTPFRATWDPKTENCFVIGSMGHPRKLDVYSCVGPGRLEWIPLRDDNFG-----TVGSVNAFHPTKNILISGNSSGKAHVW 1590
            ++MT E+ E N   +   + TW    KP +   E       +Y   +N + +S     KVT   I S+A+HPSE++T+ A G K G VG+ D+         P  + V VF PHS P++CL F   +   ++S SYDGTLR GDF++  F +V+  + S    + F       +  ++   +G+++L+D  +     E         ++ +  HP +   F   G   T   +D R L ++ +   I + +  K+ +  YFSP TGN++  T  D  +RIFD   S   S       T++H+  TGRWLT F+A WDPK E+C ++GSM HPR+++++   G         R  +FG     +V S+NA HPT+ IL  GNSSGK HV+
Sbjct:  252 LEMTSENQEDNNERFKGFLHTWAGMSKPSSKNTEKGLSSIKSYKANLNGMVISEDTVYKVTTGPIFSMALHPSETRTLVAVGAKFGQVGLCDLTQQ------PKEDGVYVFHPHSQPVSCLYFSPANPAHILSLSYDGTLRCGDFSRAIFEEVYRNERSSFSSFDFL--AEDASTLIVGHWDGNMSLVDRRTPGTSYEKLTSSSMGKIRTVHVHPVHRQYFITAGLRDTH-IYDARRLNSRRSQPLISLTEHTKSIASAYFSPLTGNRVVTTCADCNLRIFD---SSCISSKIPLLTTIRHNTFTGRWLTRFQAMWDPKQEDCVIVGSMAHPRRVEIFHETGK--------RVHSFGGEYLVSVCSINAMHPTRYILAGGNSSGKIHVF 620          
The following BLAST results are available for this feature:
BLAST of TCONS_00022100 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR761.453e-5633.16WD repeat-containing protein 76 OS=Homo sapiens GN... [more]
back to top