TCONS_00021995 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021995
Unique NameTCONS_00021995
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3551

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021995 ID=TCONS_00021995|Name=TCONS_00021995|organism=Clytia hemisphaerica|type=transcript|length=3551bp
TTCTTATTTTACagataaaatcaaataaaaacaataaaaggaAAACATAA
GAAAGTCTCAACGTATTTTCAACATGGAAGTCGGTTTATTTTCGGACACG
TCCGGTGAGCAATCTTGTGTATCCGTTTACAATCTATCAACTGGTGTGGT
ACTCAAAACCTTTAAGAACGGATCATGTGGACGAAAAGGACTCGCCTTGG
TACAGAATGAATATTTGTTGGCTGTTCAACACGCAAAACAACTAATTCAT
ATCTATGATATGGAGAAGGAATCGTTGATGAAGAAAATAGTATGTTCAGA
AAAGATCAACGCCATTGCAGTCACACCCGACGGTCACTTTGTTGTAGCAG
CTTTGAAAGATCAAATTCATATTTGGCAGTTTTCATCTGGACAATTATAT
TGTGTATTATCGAGACACTTTCAAGACATCGTTGGTATTGAGTTCACCGA
AGacggaaaatattttgtttcctACGGACAAGATAATCTCATCATTGTCT
GGGATTTGAACAACGTTCTCCAGTCTTGTATGTCTTCACCGAACTCTATG
ACGTCAGAACAACGTCACAAACCTGTCCACGTGCTTTCCAATCATTCAAT
GTCGGTCGAAGATCTCAATATTGGTGTCGGAAGTTTTCGAGCAAATATGG
TGTCATGCTCCCTTGATCAGACGTGTAAAATTTTCGAAGTCAGCTCCGGT
AAACTTTTAAAGAATTTCGTGTTCGATGTTGGTTGCACTTCGGTTGCTAT
GGATACGTGCGAAAAACTCCTGTTTGTCGGCATGGCAGATGGACGAATTG
CAATCATCAACTGTTACGATCAGAAACCAAGTGTAGATGCTGAAGTCACC
GAATCTTGTTACATGAAAGCTCACAAGAAAGCAATAACTTGTCTTTCAGT
ATCACTCGATGGTCAACATTTAATCTCAGGCTCTAAAGATTGTTTCGTGA
AAATCTGGCATATTTCAAGTCGGAAGTGTATTCGCTCTTTTGAGTTCAAA
GAGCAAATCACGAACGTCCAATTAAAACCTGCGTTCCTCTTCAACAACAA
CTACAATAATAATACTTCAAACTCTTGTAAGCGAACGATCGGGAATTTCC
AAAGAAGTGTTTATACACCAACTACTTACAAAGATACCAATGAGATGTTT
TCAGCCTcctcaaagatggcggataacAGTGACACTATACCAATGGTCCT
TAGGGATATTAATGACAATGAAGAGGGATACCAAGAACCAAAATCTTGTT
TGGAAGATGTTTTAAGAGAGTTTTACTACTCGAAACAATCATCCTCTAGC
AGCACTGAGGACGAGAACAATACAGCTTCAAGAGAAGAACTACAACAACG
TGTTGCTTCTCTAGAAGCGATGACCCAAGAACTATATAAAGCCTCAACTA
ATAAACTCTTACAAACTTNGTTGCCTCTCTAGAAGCGATGACCCAAGAAC
TATATAAAGCCTCAACTAATAAACTCTTACAAACTTTAAAAGAGAACTCT
ATGGAAACTTCCTCCGCCAGGTAACATACTGTTATTTGTTgatattattt
tctttctttggaGATCGCCACGGTCTGgttgttttgaatgtttttatggA
TTTAGAGGGCTCAAACTCAGCTGTGAATTGAGCAACAACATATGTATTGG
ACCAAGACAGCTCGTATTGTTATTTTTGATTATGTCAGCATTAAAGGGTT
GAAACTCGAACCACTAATAGAAGAGCATTATATGGTAGCTGTTTTATTGT
TGTCATTTCTTTGGTTTCGATTATTTCAATCATCTGGTTGTTTTAAATGG
TGTAGGGTTTAATAAAAGCTCTAACCGAACAACATATATCATTTCAAGAC
GGCTCATTTTCTTTGGTATTTGGTAATGTTTGCCTGAAATTTTCGTATTC
ATAACAATATGAATATTGAACCAAGACATGGTTGTTTTTATCTTTGCTTT
CGATTACCTCATTCTTCtggttgtttttattatttgagGTATTTGAGTGA
GGACTAGACCATGAGAGCATTATTGACTTTACTCGCTGGCCATACAATTT
CTACGGCATGTTTGTTTTTATGGTTCCATTGGAATAGTTCCAACAACACT
ATAGCTGGCCAGATAGTTACagcttgttatttttttttggttgattttgt
tctatggttttattttggtttgtttGTCAGTGCGAGGTTGTTTCGAATTG
AACTAAACTACCTCGCCCCATAGTTGATATATACGTGACTAGCATGAAGA
CCAGGACCCTTCAGTATAAGAACTATGTTATGTTTTGCGCTCCTATCGAA
CAATATCATGTCGAAGAGCTAGAGTTTTATTCGAGCGATATAAAAATTAT
AACAAACTTCTGGTGAAAGCAACAATTTCGACTCTTTGTCCTTTACCATC
TCAGATAAAACACACAACAGAAAACAAGAAAACTTGATGACAAGTTTCTA
TAATTTGTCAGTAATATGGAACTTTTTAGTATCATTTTCATAAGATaagt
ttttattattattataacaCTATATATAGTTCTGAAAAAGGTAAGAAAAC
ACCATACtactaaaataaaatcaataaaactaattttgataatttcccTA
AACTTTACAACCTGTAAAGTAAATGTATTGTCTGATTCGTCTGGCAGCTG
AGATATTCAAGTTTTAATGATGACAACACCAGAGAAGTGTGGATCTTTCT
AAGATTGTTTCTTTATCAAATCTTTCACTAAGGCTTTTGTTTCCATCGTT
TTTGATTCTATTGCTCTATGATGTTTGGGCCTTTTTTCTTGCATAAAATT
CAAGATTCGGTTACCTCAAGAGCTGATGAATGATATATTCAACGTATTTG
GAGTTATAGCTTAGAAGCCAGCTGGCTTTCCTCCTTTCCTATAATCACAA
TAGGCGTTGAGTTTACCGCCTGGTAACCTTACTATAGCTTGAACAACTCC
CATAATGGCGTCCATTTGACCTATGAGGAAAAAAGGAGAGTAGTAATTTT
GAAGGACggtgttttgatgcttttttgtcagtttttggaACAAATTGACC
TATCCAAGACCGAAGGAGGGAGGGTGAAGCCACGCAGCTTGTCTGACTGC
TGTATTACCCTCACTTACCCCCTCGACAGCCGTGCACCCTGCCCTTCCTC
CTTAAGGCGGCGCCAAAGGTACTCTAAAAAAAGAGGAGATCCTTAGCTTT
CTGATAACTATTAACTATTCCTTCTAGTTCCGGAGATCCAGTTTTAAGTT
GTACTgctccaatttttgagaaagctTAGTAAAAAGCATGCTACGACTGC
ACTTGAAAAACTAATCAGGACGTCGTTGTTTGACGTTTCCTGTAAACTTA
GAAGAGTAAAATACCTACCTGATACATCATAAGTACTATTGGTGACATAT
TCATGTTTATATTTGCTGATTGGGCCCAACAAATCTTTCGGAAACGTTGG
CTCGTATACCACAGTTGGTGGGAAAAGTTGACAATGTATACGGGGCTTTG
CGACAGCTACAGCGATATTGTTACGGAAAAATAACCAGTTAGCAATTGTC
T
Run BLAST on NCBI

transcript from alignment at sc0000401:259889..270840-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021995 ID=TCONS_00021995|Name=TCONS_00021995|organism=Clytia hemisphaerica|type=transcript|length=10952bp|location=Sequence derived from alignment at sc0000401:259889..270840- (Clytia hemisphaerica)
TTCTTATTTTACAGATAAAATCAAATAAAAACAATAAAAGGAAAACATAA
GAAAGTCTCAACGTATTTTCAACATGGAAGTCGGTTTATTTTCGGACACG
TCCGGTGAGCAATCTTGTGTATCCGTTTACAATCTATCAACTGGTGTGGT
ACTCAAAACCTTTAAGAACGGATCATGTGGACGAAAAGGACTCGCCTTGG
TACAGAATGAATATTTGTTGGCTGTTCAACACGCAAAACAACTAATTCAT
ATCTATGATATGGAGAAGGTATTTAACTCTGACGATGTATTATTACAGAC
TTTCTTTTCAAACATTTTGATTTTTGAGTTACGAGCTTTCACCTAAAGAC
AAAAACTTCTTGAGTCAATATTTGGAGTTGTTTTTCCATGAAAAAAAGTA
TGAAATGAGTTTTGATAGTAGTATATAAACTCTATTCTTTATAGTTTCAA
CTCAACTTTTACAAGCTTTAAATGATAAGTATCAGTAAAATGTCAGCGTA
AAACAGTGGAATTCTAATAATTGCCAAATTGAAGGGGTGGAGGACTTTCC
TTTCAAATTTACGACTTTAGATGCGATGCTCCAAAAAAAAGGACTGGAAA
AATTGGAAAAAAGCTGAATACGATTTGGTATTACATTTTAACTATCAGCA
AAGTGGATACAGTCGCTCTCATGTTGTCTTCTGAATAGCATTCAGAACTG
TTGGAAAACGAACTTCTCCGGCGAGACTCGAACTCACAACCATACCATTG
ACGAGCATTTGCTTTACCATTGAGCTGGTGGTTGTTCAGTAGTAAGTCTG
TGACCGCAATCGGAGGCGACCCGAAGGCTCCTCTTTCGATAGCTATCTAC
CCGAAGGTAGATAAGGGCACCACTCTTTCTCCCTGGATTTCTCCACTTAC
CCTTAACTGCCCTTAATCCTTCTCTTAATTGCTTTAAATTGCTGAGCATC
AAGCAGAGAGGAATCAAGCACCATTTTGGTATGCCCCGGCTGTGGGTTGA
ACCCACAACCTTGCGAATCGTAGCCGGATGCTCTACCACTGCACAACGAC
TTTTCACAAGACAATATGAGAGCGACTGTAACCACTTCGTTGTAGTAAAA
AGACAAAAAAATCATGATTTTAGCTATTGTTTTCACAATCACATATAGGA
ATCGTTGATGAAGAAAATAGTATGTTCAGAAAAGATCAACGCCATTGCAG
TCACACCCGACGGTCACTTTGTTGTAGCAGCTTTGAAAGATCAAATTCAT
ATTTGGCAGGTAAGGGTATTTGGTTGAAAGGTCTCTGCAATTTTTCTTGA
TGTAGTAAAAACATTAGTTTGTAACCAAAACTGTTAAAGATATTCTTTAT
TTATGATAAAGAAAGGAGGCGCTTCTATGGTGACAAAGCAGAATAAACAA
TAATAGAATTTCTCGTAATTAATGTTTTCGCGGTGTGCAAAATTTTGAGT
TGAAAAATCATATTTTTGCAGTATTGGCATATGTTTATTTGAGCTTAAGC
CTCGACACTATTTTCGATACTGTCGTTAAAAAAATTTTCCTTCGAAAATA
CGTTAACAGTCTCCTTAAAAGGTGACCGCATCGTCAAAGGTTGACAGGTG
TTTTGTAGAATAGAGAATCAACTAGGTATATAACTCAAACTGAGCACTAC
AAAAAATGAAGTTTTGAATTTTTGTTTTGTCAAGGCTCATTCTGGTAGAG
CACTTTGTTGTTGTTGACAATCATTTTCAACTTATTTGATATAACTCTAT
TCATGATATGCACCATTGCAATGTCTTCACGCGTCGCATTGCGTAACATT
ACGTAATGCGTTCTTGCCGCCATGCTGGGTTGAATAAAAAATCCGCGGGA
AAATATCAGGTGGCAGATTCAACGTGTATTCCAAACCCTCCCTTTCTTTT
AAAATATAACCATTTATGGGAATTTTGTAAAAATCTCAGGGTTTTTTGTT
TCTAAATACTAAAATAAATCTTTCCCTCGAAATCACACCACCTATGGGAT
TCGAACTCACGATGAGTCTACAAATTTCAGTATAGTGAGAGAATAGAAAT
GTCATTGCGCCACCAACTGTATAGTTTGAGCGAAATTATCTTCTTATTAA
AATATCGGTTTGAAGACTAGGGCCGACACTTGGAAACGAAACCGAAACAA
AAGTAAACAAACTAGGGAAATGGTTCCGAGCTTGAGTTAAAAAAACAACA
ACATTGAAATCGGAAGTAGGAAAGTGAAAGTAAGACATGACAGGATAATA
AATGGATGGAGAAATCAAAGATTCCAGGGGCAAACGTTCATCCTATTATC
CTAAGTTACCAGCTGAAGCAAAAAGCAGGTATGATGCCAAGCTTCTTGCA
ATGCAGCTTGTGTATGATCCACTTGTGATTGGAAAAACATACTACCGCAG
TTCACTGACCATTTTGAGCAATGGCCAAATTTGAGTTATGCCGATATATA
TGCATATCTCATTGACCACCCCAGTACATATAGCCATCAGCAGTTGAAGG
CATACAAAGGACTTGATGGGTATAAATATGTAAATGCCAAACTTGTCAAT
AATGTCCTCGTCAAACCAATGAATCTTAAAGATGGAAACTACCATTTGGT
CATGGCAAAGGTACGCCATGGTTAAAGTATGTTTAGCAAGACCCTACCTC
GGGCATGGGTGTATTTGAATCCTGATGGCGAGGTTTGTTATGCCCATTGT
ACTTGCATGGCTGGACTTGGTGAAGCATGCTCACACATTGCAGCAATCCT
GTTTTTGCTTTACATGTCCACAAATCATAGAGAGCGGATGTCATCTAACT
CTTGCACGTCACTAGAATGCCCTTGGCTGCCAGATTCTGCTGTCAAAGAA
GTTGAGTGTCTACCAATATCGAAAATTGATTTCAGTGACCCTAAGAAACG
AACAGAAAGTGATACTACCGCCACAACAGTGAAAGAAAAAAACCATATCA
AGTAATGTTACGCAATGCGACGCGTGAAGACATTGCAAGGGTGCATATCA
TGAATAAGGCCAAGGGTTGACAGGTGTTTTATAGAGAATCAACAGATAAT
CAACTGTATATAATCCAGTGACAAGAACATGTCTTTCATTATCTCTTTCA
GTTTTCATCTGGACAATTATATTGTGTATTATCGAGACACTTTCAAGACA
TCGTTGGTATTGAGTTCACCGAAGACGGAAAATATTTTGTTTCCTACGGA
CAAGATAATCTCATCATTGTCTGGGATTTGAACAAGTGAGTGATTTTTAG
GATTTAAGATTACTACACCTCAAATGAAACAATTTGTTGTTCATGGAAGG
CTGTAGAATTTTCTGTTGAGTATTGAATTTTATCAAAGATTGCTGATAGT
GGGACTGAATTCTATGATTGGGTGATCTAAAAGGCTGACTTGATGATGCA
AATGAATAAAAAATTATATATATTTTGAGCTTGGTAATGCTGGTTTATCC
CACCTCTACCCTTACACCTGAGTAACTTTGCATTTGGGAAAAATCTAAAT
ATAATAGCCGTATTCTTCTTCACCGTTCAACATAAGTAACTTTACATAAA
CTCTAACGAGTTTAGATATCGCTCTGAAAAAAAACGCTTTTTGTTAATTT
TTGATTTTACACAAGTGCATATGTATTCCAATTTATATATCTGTTATTTC
CAGCGTTCTCCAGTCTTGTATGTCTTCACCGAACTCTATGACGTCAGAAC
AACGTCACAAACCTGTCCACGTGCTTTCCAATCATTCAATGTCGGTCGAA
GATCTCAATATTGGTGTCGGAAGTTTTCGAGCAAATATGGTGTCATGCTC
CCTTGATCAGACGTGTAAAGTAAGTGGACCTCCTTCACTGAGCTCTATTT
ACTTGACTGGATCGAACTTTCCATATAAAAAGAAGTAGTTTGTGAGCTGA
CTAGTCGGCCATCTTGTTCTCAGCTTGTTTTCGATACTGGTCGTCAACAG
TGCGATCCGAATGTTATGAAATTTGAACGTTTGAAAATCTAAGGTAAATA
AGAAATAACGTAGCGGGCTAGTCGACTTCCAAACTGGATACACTTCCACG
GAAATCTGCCAGCAACCCATCTAGTGTGTAAAGAACTGTGATTACTATGG
TTCATCACTTTAATCCAAGTCATAGCATGCAAAAATTGTGATTTTGCGCA
CTGACTGATCTTCCCAATGACAATTAGATATGCTACGTTAAAGAATTTTT
ATTCTACATTCACTCTTTTAAAATCGTCGTTTTCTTCCTAGATTTTCGAA
GTCAGCTCCGGTAAACTTTTAAAGAATTTCGTGTTCGATGTTGGTTGCAC
TTCGGTTGCTATGGATACGTGCGAAAAACTCCTGTTTGTCGGCATGGCAG
ATGGACGAATTGCAATCATCAACTGTTACGATCAGGTAAAGTTGTACGCG
CTTTTTTTTAAAGAACCGGTTACTTTTGGTCACTGGATAGCACTTTGACG
ATTTTTGAAAAATAGAAGCCTTTCAGTGCTTTGACGCAAATTCGATTTTT
CGCTAGCACAGGAGCTTCGAAAGCTAAAAGTGACGTCAAAAAATCGAATG
TTTATAACCTGAAAACCCGGGCTCTAAACATTCGAAAAAGTCGCAAAGTG
GAATAGACGGTAATTGCGTAGAAAAAGGTGGTTGACGTCTAGAATAGGCT
AGTCACTGGAATCATAAGAAATATCTAGGAGTGATGCGGCCAGTGCCGCC
TGTTCTTGTTACTCAATCTAATCAATTATTAAGCATAGAGCAAGGTTTGA
TTTTGCAAAAATAAAACTATTTGATGTTTGCGGACAAAACCTTTTTCCCG
GAAAGGATGAATTCTTTGGTCTAAAAAGGTTTAAGGATTTTTGTTTGATC
ACACAATTCACTGTTAAGAGTACTTTTCAGACAATATTATTGGCTGCTCG
ATATCTCTTTTTTTTTTGCGAACTCAGCGAACTCGGGCTTAAATNGGAGT
GCGCAGAGTCATTTACAGATTTTTCTTGTAACAATGAGAAGACAATGGAT
CTCTCTTGGGAGCAACGAGAGAAGTTAATCCACCTATTCTAATCCGTTGG
TTTGATTTTGCAAAAATAAAACTATTTGATGTTTGCGGACAAAACCTTAT
GTGTCTTGTATGTTTTAGAAACANTAAATCGGCAAGTATAGGGTTAGTTG
ACAACTTTATGTGTTTTGTATGTTTTTAGAAACCAAGTGTAGATGCTGAA
GTCACCGAATCTTGTTACATGAAAGCTCACAAGTAAGTCATTTCAACGTC
ATTTTAATGTCCGTTACTTCAGAATATCACCAGGGGTATATCATGACGCT
AAATGGGTTGGTATAGCCTTAGGTCAGCCAAACTTCGAAATTAGCGCAAA
ATTAGTATAATTCATAAATTAACACTACGTGGTCTGAAGAAGAAATGGTT
ACTTATGTTTAACATTTGATATTGCGCTTGCTTGAAATTTTGTATAGTCT
GTTCCTTGGGTTAATATCTTGGGAATTTTTTTTATTCCTTATAATCATTA
GGGTCTTAGCATTAGCATTCATTCACGCCTTTTCCAAAACATTGTACACT
TTCCATACTTTAATTTCTTTCGGAACTGGGCCTTATTGGCCTTGTACTCT
TTTTTATACTCATGCGCTTTCTTACTTTTATCTCTGCAGGAAAGCAATAA
ANGATGTTTGCGGACAAAACCTTTTTCCCGGAAAGGATGAATTCTTTGGT
CTAAAAAGGTTTAAGGATTTTTGTTTGATCACACAATTCACTGTTAAGAG
TACTTTTCAGACAATATTATTGGCTGCTCGATATCTCTTTTTTTTTTGCG
AACTCAGCGAACTCGGGCTTAAATCGGCAAGTATAGGGTTAGTTGACAAC
TTTATGTGTTTTGTATGTTTTTAGAAACCAAGTGTAGATGCTGAAGTCAC
CGAATCTTGTTACATGAAAGCTCACAAGTAAGTCATTTCAACGTCATTTT
AATGTCCGTTACTTCAGAATATCACCAGGGGTATATCATGACGCTAAATG
GGTTGGTATAGCCTTAGGTCAGCCAAACTTCGAAATTAGCGCAAAATTAG
TATTATTCATAAATTAACACTACGTGGTCTGAAGAAGAAATGGTTACTTA
TGTTTAACATTTGATATTGCGCTTGCTTGAAATTTTGTATAGTCTGTTCC
TTGGGTTAATATCTTGGGAATTTTTTTTATTCCTTATAATCATTAGGGTC
TTAGCATTAGCATTCATTCACGCCTTTTCCGAAACATTGTACACTTTCCA
TACTTTCATTTCTTTCGGAACTGGGCCTTATTGGCCTTGTACTCTCGCTT
TTTTTATACTCATGCGCTTTCTTACTTTTATCTCTGCAGGAAAGCAATAA
CTTGTCTTTCAGTATCACTCGATGGTCAACATTTAATCTCAGGCTCTAAA
GATTGTTTCGTGAAAATCTGGCATATTTCAAGTCGGAAGTGTATTCGCTC
TTTTGAGTTCAAAGGTACACCGATGAAATATTTTGATCTATTTTCATTTT
GATTTTGTGTACACTCTAAAGCTCTTCAACTTTAACTATAGGGTTTCGCA
ATTTTTCTTTTTGATTTCATTCGAATTGAAGGGTAATTTGTGGGAATGCA
ATGGAACGAATTGATGGAATGAATTTATCCTCGGTTAGTGTTTAGGACAA
AGCTTTAGTTTTGAAAAATTAAAAAAATGGATGGCTCCTTTCCAAAACCT
TAATGGTAAGGACCCAAACCTTAGGATGCGTGACATCTTCCTTTGATAGG
ATATCGAACTATTAATGGTAGTGTTTGGGTGTTTTGTGTTAGGAGTTTTG
GCTGTAACACCACTATTGGCTGTAACACCACTTTTGGCCATATAAAGTTT
TGTCAGGCCTAATACGAAGGGTTCCCTCTCAAAAAAGGCACAAAATTACA
TCTTCTTTCGAACTAGCCACATAAAATTGCGTCCCAAAGGGTCGGCCACT
ACTACAAATTAAATAATATCTCCACCTGTAGTTTCGCAATTACCAAATTT
CAGGTATACAATGTAATGCTAGGTTAGAACTTGACCTTCTTGCAAATTTC
TCCTTATAAAATCTTTGAATCGATTTCTTTTTATTTCCACGTAGAGCAAA
TCACGAACGTCCAATTAAAACCTGCGTTCCTCTTCAACAACAACTACAAT
AATAATACTTCAAACTCTTGTAAGCGAACGATCGGGAATTTCCAAAGAAG
TGTTTATACACCAACTACTTACAAAGATACCAATGAGATGTTTTCAGCCT
CCTCAAAGATGGCGGATAACAGTGACACTATACCAATGGTCCTTAGGGAT
ATTAATGACAATGAAGAGGTATTATACCTCTATATCCCTTCTTTCCGGAA
ATCACCCTCTCTCCTCAAAACCCTACTTTCCGGAAAATCCCACTCTTCGT
AACGCCCTATTTTCAAAGATTGGTGATTTTACCTTCACCAACACTCAAAA
AATGTTCCCAGCCNTCAAAGATTGGTGATTTTACCTTCACTAACACTCAA
AAAATGTTCCCAGCCTCTCAGTTTAAGCTGGCGAATAATAGTAATACTAA
GCCAAACCGATGATTTAGAGAGATCTTTAGCAGACATAATTTGAAGGTAG
AGTACCTGATACGGTGTGCAAGGTACCAAAGATTCCAAAATAATTTCGAT
TTGTAACTCAGTCGAGGTTTCATTTCAACACAAGAGTTGATGTGAGTCCT
ATTTGTTTACAACGAATTTCAATAATAATTGTCAAAAAAAAACAATGTCC
TTTTTGTGCAATGGTCGATTTTATCACAAGTTTATATCAACTTTTATTTT
CGTAGGGATACCAAGAACCAAAATCTTGTTTGGAAGATGTTTTAAGAGAG
GTATTTATAATACACATTTTTTTATAAGCATTATGCTGAGCCTCAGTTTC
AAAATATTAACGTCATTACATAAATATAGCATAAACATATTTTGAGGCTG
GAAAAAGAATGTTGCTAAGCATCACGAAAATTTACCCTATGCTTATTAAA
AAACTTGCATGGATTGAGACAATATAATTCAAACTCCTAATGGGAGGGCA
GCAACCATTCAAGCTCGAGAAATTGTTCGGAGATGACCAAAGAGGTAAAA
GTTTCTGTTGAGTTCAAAGGGACCAAAGACGGTTACCACTTTTAGAGACA
ATAGAGTTATACAAGTTCGACTTTTTGAGACATTACTTACAGTTGACTCT
CCCTAATTCGACCTCGAACGGGAAATCTAATTAGTTCAAATTAAAGAGAG
TTTCGAGATTTAGAAAGTTAATGAGAGTTTCCTGCAGGGTTAAAGAATTA
GTCTGAACTGTCAAAATATTCAATTTTAATAAGAGACCCAATTATCGAGG
ATGCTAAAGTAACAGACCTCAGAAATGGTACTCGATACCTAACTTCTTGA
TGAAAGAGCTGGAGAAGGCTCAAGGCTCAAGGGTAAATGGAGAAATCAAG
GGAAAGAAGTGGCCTTCCCTAAACCTTCGGGTAAACACGTAAAGAAAAGG
TAGTTTGTTCAACTTCTTAATTGATAATATTGAAAGTCGCCATCAACGAG
AAACTCTGGCGCGCTACTACTGGATACGCTCCCTTATTCCAATTCTCCTT
AAAAACGAATTAAAAAGCGTCATCAACTGTAGTATCAGCTTTGTATCAGC
TTTGTTCACTTTTTCTTACAGTTTTACTACTCGAAACAATCATCCTCTAG
CAGCACTGAGGACGAGAACAATACAGCTTCAAGAGAAGAACTACAACAAC
GTGTTGCTTCTCTAGAAGCGATGACCCAAGAACTATATAAAGCCTCAACT
AATAAACTCTTACAAACTTNGTTGCCTCTCTAGAAGCGATGACCCAAGAA
CTATATAAAGCCTCAACTAATAAACTCTTACAAACTTTAAAAGAGAACTC
TATGGAAACTTCCTCCGCCAGGTAACATACTGTTATTTGTTGATATTATT
TTCTTTCTTTGGAGATCGCCACGGTCTGGTTGTTTTGAATGTTTTTATGG
ATTTAGAGGGCTCAAACTCAGCTGTGAATTGAGCAACAACATATGTATTG
GACCAAGACAGCTCGTATTGTTATTTTTGATTATGTCAGCATTAAAGGGT
TGAAACTCGAACCACTAATAGAAGAGCATTATATGGTAGCTGTTTTATTG
TTGTCATTTCTTTGGTTTCGATTATTTCAATCATCTGGTTGTTTTAAATG
GTGTAGGGTTTAATAAAAGCTCTAACCGAACAACATATATCATTTCAAGA
CGGCTCATTTTCTTTGGTATTTGGTAATGTTTGCCTGAAATTTTCGTATT
CATAACAATATGAATATTGAACCAAGACATGGTTGTTTTTATCTTTGCTT
TCGATTACCTCATTCTTCTGGTTGTTTTTATTATTTGAGGTATTTGAGTG
AGGACTAGACCATGAGAGCATTATTGACTTTACTCGCTGGCCATACAATT
TCTACGGCATGTTTGTTTTTATGGTTCCATTGGAATAGTTCCAACAACAC
TATAGCTGGCCAGATAGTTACAGCTTGTTATTTTTTTTTGGTTGATTTTG
TTCTATGGTTTTATTTTGGTTTGTTTGTCAGTGCGAGGTTGTTTCGAATT
GAACTAAACTACCTCGCCCCATAGTTGATATATACGTGACTAGCATGAAG
ACCAGGACCCTTCAGTATAAGAACTATGTTATGTTTTGCGCTCCTATCGA
ACAATATCATGTCGAAGAGCTAGAGTTTTATTCGAGCGATATAAAAATTA
TAACAAACTTCTGGTGAAAGCAACAATTTCGACTCTTTGTCCTTTACCAT
CTCAGATAAAACACACAACAGAAAACAAGAAAACTTGATGACAAGTTTCT
ATAATTTGTCAGTAATATGGAACTTTTTAGTATCATTTTCATAAGATAAG
TTTTTATTATTATTATAACACTATATATAGTTCTGAAAAAGGTAAGAAAA
CACCATACTACTAAAATAAAATCAATAAAACTAATTTTGATAATTTCCCT
AAACTTTACAACCTGTAAAGTAAATGTATTGTCTGATTCGTCTGGCAGCT
GAGATATTCAAGTTTTAATGATGACAACACCAGAGAAGTGTGGATCTTTC
TAAGATTGTTTCTTTATCAAATCTTTCACTAAGGCTTTTGTTTCCATCGT
TTTTGATTCTATTGCTCTATGATGTTTGGGCCTTTTTTCTTGCATAAAAT
TCAAGATTCGGTTACCTCAAGAGCTGATGAATGATATATTCAACGTATTT
GGAGTTATAGCTTAGAAGCCAGCTGGCTTTCCTCCTTTCCTATAATCACA
ATAGGCGTTGAGTTTACCGCCTGGTAACCTTACTATAGCTTGAACAACTC
CCATAATGGCGTCCATTTGACCTATGAGGAAAAAAGGAGAGTAGTAATTT
TGAAGGACGGTGTTTTGATGCTTTTTTGTCAGTTTTTGGAACAAATTGAC
CTATCCAAGACCGAAGGAGGGAGGGTGAAGCCACGCAGCTTGTCTGACTG
CTGTATTACCCTCACTTACCCCCTCGACAGCCGTGCACCCTGCCCTTCCT
CCTTAAGGCGGCGCCAAAGGTACTCTAAAAAAAGAGGAGATCCTTAGCTT
TCTGATAACTATTAACTATTCCTTCTAGTTCCGGAGATCCAGTTTTAAGT
TGTACTGCTCCAATTTTTGAGAAAGCTTAGTAAAAAGCATGCTACGACTG
CACTTGAAAAACTAATCAGGACGTCGTTGTTTGACGTTTCCTGTAAACTT
AGAAGAGTAAAATACCTACCTGATACATCATAAGTACTATTGGTGACATA
TTCATGTTTATATTTGCTGATTGGGCCCAACAAATCTTTCGGAAACGTTG
GCTCGTATACCACAGTTGGTGGGAAAAGTTGACAATGTATACGGGGCTTT
GCGACAGCTACAGCGATATTGTTACGGAAAAATAACCAGTTAGCAATTGT
CT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012345XLOC_012345Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021995-exon-sc0000401-1575043694:270573..270840TCONS_00021995-exon-sc0000401-1575043694:270573..270840Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:269582..269692TCONS_00021995-exon-sc0000401-1575043694:269582..269692Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:267606..267739TCONS_00021995-exon-sc0000401-1575043694:267606..267739Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:267022..267187TCONS_00021995-exon-sc0000401-1575043694:267022..267187Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:266456..266599TCONS_00021995-exon-sc0000401-1575043694:266456..266599Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:264914..264966TCONS_00021995-exon-sc0000401-1575043694:264914..264966Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:264377..264501TCONS_00021995-exon-sc0000401-1575043694:264377..264501Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:263523..263746TCONS_00021995-exon-sc0000401-1575043694:263523..263746Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:262991..263035TCONS_00021995-exon-sc0000401-1575043694:262991..263035Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1575043694:259889..262169TCONS_00021995-exon-sc0000401-1575043694:259889..262169Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:270573..270840TCONS_00021995-exon-sc0000401-1510915933:270573..270840Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:269582..269692TCONS_00021995-exon-sc0000401-1510915933:269582..269692Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:267606..267739TCONS_00021995-exon-sc0000401-1510915933:267606..267739Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:267022..267187TCONS_00021995-exon-sc0000401-1510915933:267022..267187Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:266456..266599TCONS_00021995-exon-sc0000401-1510915933:266456..266599Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:264914..264966TCONS_00021995-exon-sc0000401-1510915933:264914..264966Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:264377..264501TCONS_00021995-exon-sc0000401-1510915933:264377..264501Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:263523..263746TCONS_00021995-exon-sc0000401-1510915933:263523..263746Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:262991..263035TCONS_00021995-exon-sc0000401-1510915933:262991..263035Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1510915933:259889..262169TCONS_00021995-exon-sc0000401-1510915933:259889..262169Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:270573..270840TCONS_00021995-exon-sc0000401-1491911889:270573..270840Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:269582..269692TCONS_00021995-exon-sc0000401-1491911889:269582..269692Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:267606..267739TCONS_00021995-exon-sc0000401-1491911889:267606..267739Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:267022..267187TCONS_00021995-exon-sc0000401-1491911889:267022..267187Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:266456..266599TCONS_00021995-exon-sc0000401-1491911889:266456..266599Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:264914..264966TCONS_00021995-exon-sc0000401-1491911889:264914..264966Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:264377..264501TCONS_00021995-exon-sc0000401-1491911889:264377..264501Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:263523..263746TCONS_00021995-exon-sc0000401-1491911889:263523..263746Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:262991..263035TCONS_00021995-exon-sc0000401-1491911889:262991..263035Clytia hemisphaericaexon
TCONS_00021995-exon-sc0000401-1491911889:259889..262169TCONS_00021995-exon-sc0000401-1491911889:259889..262169Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:259889..270840 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.22006e-10	4.66805e-08	1.43657e-07	4.05863e-05	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2.22492e-09	0	0	0	0	0	0	0	0.216658	0.707725	7.80558e-07	7.58722e-09
Blast
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BLAST of TCONS_00021995 vs. Swiss-Prot (Human)
Match: WDR18 (WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.385e-67
Identity = 119/322 (36.96%), Postives = 194/322 (60.25%), Query Frame = 2 
Query:   74 MEVGLFSDTSGEQSCVSVYNLSTGVVLKTFKNGSCGRKGLALVQNEYLLAVQHAKQLIHIYDME-KESLMKKIVCSEKINAIAVTPDGHFVVAALKDQIHIWQFSSGQLYCVLSRHFQDIVGIEFTEDGKYFVSYGQDNLIIVWDLNNVLQSCMSSPNSMTSEQRHKPVHVLSNHSMSVEDLNIGVGSFRANMVSCSLDQTCKIFEVSSGKLLKNFVFDVGCTSVAMDTCEKLLFVGMADGRIAIINCY----DQKPSVDAEVTESCYMKAHKKAITCLSVSLDGQHLISGSKDCFVKIWHISSRKCIRSFEFKEQITNVQL 1024
            MEV + +D++       V+ L +G  L T++ G  G +GLAL+  EYLLA Q  K  I  ++++ K+ L +KI+C   +  +  +P+G +V+A + + IH+W+ S+G L  +LSRH+QD+  ++FT D  +F+S G+D L++VW L +VLQ   + P+ + +     P HV S+H++ + DL+ G G   A + + SLDQT K++EVSSG+LL + +FDV   +V MD  E  +F G ++G I  ++ +     ++ S   E       K H+  +TCLSVS DG  L+SGS D  V++W + S++CIR+   K  +TN  +
Sbjct:    5 MEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQLGKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAGVAESIHLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQ---ADPSRIPA-----PRHVWSHHALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFCGGSEGSIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCIRTVALKGPVTNAAI 318
The following BLAST results are available for this feature:
BLAST of TCONS_00021995 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR182.385e-6736.96WD repeat-containing protein 18 OS=Homo sapiens GN... [more]
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