TCONS_00021915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021915
Unique NameTCONS_00021915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1726

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021915 ID=TCONS_00021915|Name=TCONS_00021915|organism=Clytia hemisphaerica|type=transcript|length=1726bp
TTGATTCGGCCGGCTCCTTGAAGGGGTAATTTTTCTTATTATAAGGACGT
GGGTTGTAACAAAAAAAATCTAGTTAAAAAGTTTGTTGTTTTGGATTTTC
GCGAGATTGTTTGGATCTTGGTATTTATTCTTCTTTTCAAATGAAGATGA
ATACGTTGGACGTCTTCAACCCgCAAGGGGAGGGAATGACAGGCCCATAT
TTCCAACACAACATATACAATATGAGCAGCGAACCACATTTCCGGTCTGA
AAGTCCAATTCCTCGTAGTCCACGATTCGGTAGTTTACGACGACGAAAAC
GCATCGACCGAGAATATTTTGATGATACGAGTGAAGGCTCGGATGGGAGG
ACGAGTTCCGACGAATATGAATCTTCATCAAATCAAACATCGAAAAAAAT
GGACGATAATAACAACACAAATCAAAAGAATCGAAAAAACAGTCATTTTG
CTTTTAGTAATGTTaagaaaaagattacgtcaaCTTTTCAGCGTCGGCAT
TCTGTGTCAATGCACCCTCCCTCAGCGACAGTTCAAGGTAAACAATTACC
GATTCGACGATCGTCAACGACCGGAAATCAATCACCAAGACTTTTACGTC
AATCTTCGTTTGATGAGAGCCATACCGCCGTACATAAACGTAAAACGTCG
CTACGACGACAAGTTACCATGGCAGCTGTACGTTTACACGAACAAAGTCA
AGTCAGCGGTAGTAACCCAATGTTAGAcagaattttacaaaaaagcCAAT
TTCAACTTGAATCAAGTTCCTCTACACCGGATATTAAATCACATTTATCT
TTGAAAAAGAcacatttaaaaacatttaaaattcaTATACTTGGAAGCAA
GTCCGTCGGAAAAACAGCTCTGACGGTGCGTTTTCTAACGGGAAGATACA
TTCACGAATATAAATCAGCAGCAGAAGAAACATACACACGTGTGATGAAa
tatgaagatgaagaagtcaATGTTAAAATACTCATCAATGATATTGAATC
TATGGAAAATGACATTGAACTTGGTCAAAATTCTGGCATCATGATTTTAT
ACTCCATCGTTGACCGCACCTCATATGATTATgcgaaatttgttttaaat
tatTTATCAGAGAACAATATAACTGGTTACTACCCTGTCATGCTAATGGG
TACTAAACGAGATCTATCACGCATGCGTCAGGTGGACCGCAAGGAATCAT
TCAAGGTTGCTACACAATACAATTGTACACCTTTTGACGTTTCGTCGGCA
AGTAATCGACGTGTGACGGAAAGTTTTCATGCAATGTTCCGACAAATTGA
AATTCGAAATTTATTGAATCAAAATGAAGGTATTGACGCACCTACCATCG
TTAATCCACCTATTGTTGCAAGGTCAGGTAAACTCCGGTATGGAACTGCA
TAGGAAAATTCAATCACAAAATAAGAGTCGAATGAATTTTAACATAACAC
GGATTTTTAAATGAAGCCGCTGGATTAGAGACAAGATAAGAGAGAATAAC
AAATTTATTGAATTATTAATATTATATTGTAACTCTCTCCTCAAAATCGG
CTGTCACAATAATAATTCgatatcatttttattttaaacttgTCGATATG
TATATATAAGATTTGTAATttcatttcgaaaaataaagcTGTGCTTTCTA
ATGAAACGAACCAAAAGAAGTGACATAGAAGTGATAAAAACCCATACTCT
AAAACCCCATTGGGGCTTAGAGAATG
Run BLAST on NCBI

transcript from alignment at sc0000400:63003..75844+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021915 ID=TCONS_00021915|Name=TCONS_00021915|organism=Clytia hemisphaerica|type=transcript|length=12842bp|location=Sequence derived from alignment at sc0000400:63003..75844+ (Clytia hemisphaerica)
TTGATTCGGCCGGCTCCTTGAAGGGGTAATTTTTCTTATTATAAGGACGT
GGGTTGTAACAAAAAAAATCTAGTTAAAAAGTTTGTTGTTTTGGATTTTC
GCGAGATTGTTTGGATCTTGGTATTTATTCTTCTTTTCAAATGAAGATGA
ATACGTTGGACGTCTTCAACCCGtaagttaaatttcatttcataaacTTA
GTATCCTGATATTGGTCAagaagattttcaatttttttgccgaGAACTTC
AATATACCTATCTATGTAAGGATTATCTTTCGAATTTTCAAAGGTTAAAC
CGACGGACTCAGCTGTCATCCTCGTGTATTTTGGATAACTTAATACGCGG
AAAACTTTTCTACTAAGTGGAAAATAAGACATTAACTACTGTTGAGATCT
AATAAGGGGTGACGAGGTGAGGTAAAAGTCGGTTTAGGAACAAAATACAG
ATCTTGAAATCGTCATAGTACCAGCAATCAGAAGAATTTGCTTTAAAGTT
AGCTTAATAACTTAAAGATATTACgtaaaaattcttataaatataATCAC
GTTTTAATTTGACGCAACGACTTAAGAATATCAGTATTTTGCTAACTGGT
CAAATGGGTTCATCATAGCTCAAGAATGTTCATCGTCATTTTTCCCTTGT
AGGTGACACTAAAAACCTTAATAAGCAAGCAGGGTAAAAAATACTTTCCT
AGCCTCCCCCCCCCGatgatttaaaataatttattcgAACAATACAAAGA
GCTGGTTAAACAATGATTTGATTATCTCGAATAAAAAATATCTCGTTTTG
GTTATatttaaataaagtttttttcaaatttcggaATTCTACCGAGATAT
TATACCTGGTTGAAGCGCCCCCCTGATTTAAGATGCATATTATCTTTCAC
ATTCTGAACTCATTGGCTTTCCCTGGANGACTTAAGAATATCAGTATTTT
GCTAACTGGTCAAATGGGTTCATCATAGCTCAAGAATGTTCATCATCATT
TTTCCCTTGTAGGTGACACTAAAAACCTTAATAAGCAAGCAGGGTAAAGA
TAATTTCCAAGCCCCCCCCCCGatgatttaaaataatttattcgAACAAT
ACAAAGAGCTGGTTAAACAATGATTTGATTATCTCGAATAAAAAATATCT
CGTTTTGGTTATatttaaataaagtttttttcaaatttcggaATTCTACC
GAGATATTATACCTGGTTGAAGCGCCCCCCTGATTTAAGATGCATATTAT
CTTTCACATTCTGAACTCATTGGCTTTCCCTGGAAATATTTGACAGTTAA
ATCTTAAATTACTTCTTAGTCTCCTTTTTAATGCCCTTTATGCTTCATAT
CCGTTAGCTGATGGAAATAAACTATGTTTACTTTTGTCGATTCAATCAAT
TGTAAAAAGGATTTGATTTCAATTTCCTGATTAGCTAAAACAGGCAAGCA
GCCTGTATTTATGTTCAGGTCCGATTGGCGGAAAAACTTCGGCCGCCATA
AGGATTAGGCGGTCGCTTAGTGATGCAGATAGAATGTCGTCTACGTGCAA
TAATAGTTCCCTTTGAATGTACTTTGAAGATCTAGATAACATACCTTTTG
AATGTCAGCGTTGTCTGATATTTTTAAGCCATAATCTTTTATAATTATAC
TGTCTGATTTGATTTCATATTAGTCGTTCAAATTAGCTTTACCCAAGTCT
AGTTTgtaaattatcaaaacaaactatCTTTTAGCCTATAGACTTGTAGC
cttaaatttaagaaaaaatatacGAACAGTTGCACCAAATCTGGTTGCAT
CTAATCAAGAAAGGAAATACGATGGGCTATTTAATTATTGAAGGGTCGTC
TCGATTATTACATCCTGAGAAAgcttcatttattttcaaaacgaaCTAAA
CAACATTGGTTNTCCTGAGAAagcttaaaatttattttcgaaacGAACTA
AACAACATTGGTCACTTCATTTAACTGCGGTGATACCATGTTAATATGGA
TAGTTTGCAGACATCGCTATTTCACTAACCCTGTGGTaatatattttggc
caattgGAAAAAATGACGGAGTTTAACGATGAGAATGTCTTATAAGGTTT
Ggggttttgttatttttgtttaaaagagctaaaaagtttttttccaaata
atATATATGGGATCAGTGCATTCTTTCAGTTAAAGCAATCCAGGGCATTT
TTCTCACCGGGAAAACTTATTCGACCAATTTTTCCACCCAGATACGGGGA
TGTTTCTAGATGCATGTCATTTCTCTAAGCAACAAGGTGCCTTCATAGAG
TATGAAATTATCCGTTATGTCTAAGGAATGCATATTTTTGTCTTGCAAAT
CTCAAAATCTTGTTAAAAGATTGCAATTGCAAAATCACAGCATAAAAGTT
TCGTAAACACAATCAAGATCAAACAAATTAGTGGTCTATTAAGTATTATC
AAAGAGGACCTCCGTCCGAACACCTATCTTGTTTTTAAGCCTATGATAAA
TTGATTTCTTATAAGATACAATGCATTGAGAGTAagctttcccagctggc
acacaacgttttttcgacgtttatctaacgttcataacatccatataacg
ttagatgaacgttgaaacaacgttgtgtgccagctgggttctGGCCTGGT
CAGACAACCTCAAATTTAGAAATGTAGAGAATTCTTCCATAGTTTTCTCT
TGCTCTGAATCACTATAACGGTCCATTAGCTTAACCTTCGCCTACCCTTT
GCAATCTTCACTAATGATACCCCAAAGCTCGTatttgaaagaaagaaata
atgCCCCCACTGCACTTTTTTagtcttatttttcttataaaagaaatagA
TAAAAAAGCGTGATTTTGTCTCTGAGAGTCTTCAAATGCCATGAAAAGGA
TTACAAACAAATAAATAtctgaagacattgcattggtCTTGGTTTGACGT
CAAAGGTTAGGATGACCCATTTGTTTTTCTTACGTTGATACCCACCTTTA
CGACAATACGACTTAGCGCATTCCAAATGCGAGTGGGTATTCTATTCTAA
AAATACCATTAgcgattttttttatgaaaaagagCTCACTTCACGACTAT
CTCGTTTCATCATCTGGATTGCATGtttgtataatttttcaaatgcgTAT
GGACTTTATGTGACGAAAATTTGCATTTAATTTGTTTGACATTGGATTCG
TGACTCACagtcaatattttttgacttttttgagtTCGAAGAAAGATATC
TTATGTATCTTAGTGAGAGAGGAGAGTGGATGATTCAAGAATACATTTGC
TAGAGACATCGAGAAGCATAGTCGATCAGAAAATTTGTATGTTGTTGTGG
TGTTTTAGATTCTTGGTTATTTACAACTTTAGTGAACACAAGATAAAATA
CTAATTGAGAAATAATGGTTGCGGCTGTTCGAAAAAGTGCAATTGTTCCA
CCACCCCAAACCGGGTTTGTTTCTATTTTAAGTCTATTTGTATCGAATGA
GATTGGACAACATTTTCTCTTTAACATAGACTCCGGAAAGCCAAAGAAAA
CCCCAAATGCCTTGTTTACAGAAGGTCACTGTAGCTCAGTACTACATGAG
ACAGGGGTGATAGATGAAGAAATCTCAACATATTCTCCCAGTTCTCCTAG
TTCTCGCTACCcgcacttttttttaaattgttctttaaACCAAATAGATA
TTATGTTTGTTGCAACTCCTTGCTTTGgaaattaaatcaaaatcaattta
aaattcAAGTTGCGTAATTAACAACATTATGGCCGCCATTCAAAAATTGC
GTGTGTGGCCATaatctttttccttttcttcaaTATGCAGACATACTTTA
AACCCATAATTGTTTCTGATCGTGACAAGGAATTGgattgaaaagaaaaa
gcaaTGAGTTTGCAAATGCCTTCTCAAAATGAATTGACAGGAAAAAATAC
AGAAATGGGGAGAAGAAAACTAATTATAAATAGCCCATTAATTATCATTA
ATGATACACCGTCAAAACACCCGGTTTTCTATTATAATCATCATTTGATT
GACAATGCCAATCTTCAGGAAAGAGCTACCTTGTTTGAAAATACTATATA
TTCTATAAAGTTGGTAATTTTGACGATGCTCTTTTTTATACTTGGTCAGT
TGAACTAAGGATTgctttttgcaacattttgaagattttgacttGTAACT
TTTTTTACCGAGGGGAAAAAGAttgattgaaattttaattACTACATCAG
TATGTGGGTTCTAAAGTAAGGtgatttttagttttattgGAAGTAAAATG
TTGATGAAGAAAGTCTACTACACCTATAAGAACCAGCAAGCTTTTTATGA
aactcggctgttcttatttaaCAGCCCTAAGTaagagcctcaaattgttc
ttttcATGGTTTTATTTCTTGTGATAAATTGGAGTGGTCAGAATTTTCGC
ATTTAAATTACTTGAAATTCAGCCTTTTGTTGAGTTTGAGCCccaatatt
cttataaaattgttcttataatttttttattttaattaaaaGCACTAAAG
ACTAAATAGTTCCAGAAACTAATATTTCTTGTTCTACATCCGGAAATCAA
ATTTTGGAATCTTCAAGACTTTATAAAATATCTTCTCTCCGTGACGTCAA
AAGCATTCAAGATTTTAGCACTTTAATGCTACAATATTGAAAAATCTCTT
CAAACTATTCATAAATCTAAAAGCTCGTAAATTTAGTTGCCCTTTCTTTT
ATCCGTGTTGCTATTTACACCTCTCAAATACTgttaaaatttgatttcat
ttttttcatgccctttttcTTGTTTGCTTGGTATTAATTTTCATGGAGAT
TTTAAAACGATTTATTGCAATGTATACTTTTGAGAGAGAGTTATCTTTCT
TAAATTTTGTTCtcgaattttgaatttgataacTATTTTCATAATATTGT
CTATCATTGCTGTGAGTTTTTCAtcatctgtctgtctgtgtctCAAATTT
TCTTGAACGAATGGATCTTTTCAAAGGTATGACAGATCGATAAAAATAGG
CTGGAATTTGAACTTTGTTGcaattgttttaaagtttgaaaCTTTAGAAT
AATAAATCTATTATTTGGAAGGAGTGAGAATATTGCTTTTTGGTTTCACC
AACTCTAACTTCAACAAAAAGATATCCTAGACATAGACAGGATCATTATT
TTGctaaaacacttttaaaagCAAGAACATTTATTTCTGTATGAAGAGTT
TGACGCAATGGCGTatttaagcccgaagggctaatagcgaatctccttgg
tagaaTTTGAaaccaacaaatcctaccaaagctgCGTGGCTTAGAGCGGC
CCGCCTGATTTTAACACATATGGcagattgaaacaaaaatttaccactga
atttcgaaaaaaatatcactcggAAACAAAGGAATTGAAAGATTCAATCC
GTCGACAATAACACGTGGCATATCTTAGGGCTTccctttttcttgcctga
gaaaggttagagatttgcttctagccctttgggcttatacttcattgctt
TGACGGGCGGCAATGCTTGTTAAAGTTTACCATACATATATTTTGAAGAC
CTTATTGGACAGTTTGCTAATTAcgtttatattttcttttaattttaggC
AAGGGGAGGGAATGACAGGCCCATATTTCCAACACAACATATACAATATG
AGCAGCGAACCACATTTCCGGTCTGAAAGTCCAATTCCTCGTAGTCCACG
ATTCGGTAGTTTACGACGACGAAAACGCATCGACCGAGAATATTTTGATG
ATACGAGTGAAGGCTCGGATGGGAGGACGAGTTCCGACGAATATGAATCT
TCATCAAATCAAACATCGAAAAAAATGGACGATAATAACAACACAAATCA
AAAGAATCGAAAAAACAGTCATTTTGCTTTTAGTAATGTTaagaaaaaga
ttacgtcaaCTTTTCAGCGTCGGCATTCTGTGTCAATGCACCCTCCCTCA
GCGACAGTTCAAGGTAAACAATTACCGATTCGACGATCGTCAACGACCGG
AAATCAATCACCAAGACTTTTACGTCAATCTTCGTTTGATGAGAGCCATA
CCGCCGTACATAAACGTAAAACGTCGCTACGACGACAAGTTACCATGGCA
GCTGTACGTTTACACGAACAAAGTCAAGTCAGCGGTAGTAACCCAATGTT
AGAcagaattttacaaaaaagcCAATTTCAACTTGAATCAAGTTCCTCTA
CACCGGATATTAAATCACATTTATCTTTGAAAAAGAcacatttaaaaaca
tttaaaattcaTATACTTGGAAGCAAGTCCGTCGGAAAAACAGGTTGGTA
TCGCCTTCTTATGTTCTTTGGAAGTAACACTCgctaatttatcaattttt
ctgattttacgGTTCCACACGAAGCTTAGAAATGATGTAGCAGCACATTC
CTCATTTTATTGGATTTGCTTGATTAATTTTTGCCAATcgcataaaataa
attttagtcatttttaatcaattatagaaatatttcatgtttttcagCTC
TGACGGTGCGTTTTCTAACGGGAAGATACATTCACGAATATAAATCAGCA
GCAGGTAAGCAACGACGTCATTAAGACGTTATTGAGTGTTTAGCAAAGGA
CCTAAGTAAAATACTTGATAAGACTCTCATGGATCGGTCCACTCCAAATC
TAATATTTGAGTCATAAAAAGGATCACGCCATTACACCAAAAAATAGGCC
CACTCACACTATCGCGCAAGCGACTGAGGAGGCGTGGTAATAAAAGGCTA
AGATTAAGATCATAGTCATGATGTCTCTCTTTAACTTTAATCCCTGCTAG
CTAGAGGACTATGAGCTGGTAAGATTCGATAAACTGAGGTTAAAGGTGAA
CTTTGCAATAATCTATATTTTTCCGACGTTTTATTTTGTAGAAGAAACAT
ACACACGTGTGATGAAatatgaagatgaagaagtcaATGTTAAAATACTC
ATCAATGATATTGAATCTATGGTGAGTTAAATatggtttttatgaaattt
tttgaacaGCAGGATGTAAACAATACCTCTTGTCTTATAAATCCTTTGGT
ACAAATGCATTTTCAACAAATGCTAGGATTCGTatcttattttttgacaa
aaattagcACTTTGGTTGACGCTACAATGCATTCTAAAACGGATCGAAAt
caacttttgtttttattttcatatgaCTTTTTCTTGTTCAAGCTTTTTCT
GAACACTTTTAACAATACCtttttctcacagacccggtggggtTTTACCA
gctagtggggataaaattaacggaccaaaactcgatgagATTGacattcc
catgttttttatggctggggatttgaattcctttgttttccAGCCAGAAA
AGGGGATGACATTCTAGGtaatttttccagtgagaagggttcccagtggg
tctgtgagaagagggtgtttgACAATGTCATGTAAATTTACAAATGTAAT
AAAATTGGGTAAATTGTATGATTCAGATACAGATGGGTAGaagatttaaa
acaaaaatacgaaaaaaaatACTCTAAAACTCTTGGACAAATATTTCATC
CTGTTCTGGAGGAGTCACAGAAAGTGAGCCACAAGTCAAAAATACACATG
AATTGAAATGATAAAGGATGATATCAATATTTTAGTGGCAATGCTCTTTG
TTATACGTTTTAGAGAATTAAATTGATGCTAAgtagattaaaaataattt
gaagataATTTCTTGCATGTAATAATGCTGCGGGAGTCAATCGGAAATAA
TAAAGTATGTCTTCCAAATCAGATAGACAATGGATTTAATGTTTCCTAAT
CAGCGGAAGTGAGAATTACAAAGAAATCGTCAGCCAACAccaaaccaaac
caaacgcCCACGATTCATTCTGctcttcaaaaaaccttttcgTGTGTCTC
TACAATAAGAGTCTGGTAATTGCTACCAAATTCAGTTGTTTTGTAGACTT
TAGAGACAAGTGCGTAACGTTTGTGAGGTTCATGTAACGATAAAAAATAC
AACACAATATTTCAAGATTATGCGATACTTTCCGGCACCCGAGACCAGGG
CTAAAACTCatcaaataaaatataaataaaaatatcctTGATGTTCACCC
TGGGAACGAAGGTGGCTACACAGTACAGCGTATTTGATTAGCATCTATGG
CAAATCTTTACCGCGATGTATTTTCGATAAAATAGAGTGCATTTTAGTTT
GTGAACTGCGCAGCAGGACGGCTCTGTGGAAAATATATGTAAACAAAGTG
TAAGGAGGTTTAAGCATTGAACATATAACTTTGTACTTCAAGAAGAGGCA
AAAAACGAGCCTTGAAAGTAAGAAATTAGAAACCTGTCGGTAAATTATTA
AAACCTCGTATTTTATGTTAAGTGTATGGTTAGTAAAATCAACAAATAAC
TTTCAGGTACGGAAATACCAAAgtaacctcaaatcaaaacaaaacattag
gTAATTTTACTCACGACCATCACAAAAGTCCTTTAGGGGAttacaatgtt
tttattttttggtgtATTTTGTATTCTCTCGTGTTTTCATTGCAACATCT
CTACATTCCAGGAGTATCAAATTAAATCTTGGCGTCAAGACTTATCTTTA
GGAGCCATAGAGCCTCTCACATCAGTACTGTTACTGCATAGTCTAGCATA
CTAGAGACGAAGGGAAAAATTGTAGTCTATTCAAACTGATATTATTCCGT
TAcgattatcgtattatcatctaacacccatattactgtattacataGAT
TGTGAATGACTCCAGTCTATTACTTCAAAGAAAACAATCTACATGGGGTT
GCAACCGTTTCTTAAACCTCGAATCAAGTCTCAAaacacccctatctcac
agcccctgtgtaactttttttctcagtggggataaaaattcttattgaaa
tcataacggggatagaaattcctttgttctaaggttaaaaaattcagtgg
caaTGGATTTGAAGCGcagtttttaaatattgaatttcgaatgtggatga
aataaaagttaatttccaAGTGGAACTGAAACTCTAAGGTATTTTCCAAC
Cgggaaaaactttttgtcaatctttccagtggggctgggctcccagcggg
tctgtgacagaGGGATACCTCAAAGGAatttaaaaagatttcaaagttaa
AAATACATCATTTTCGAGTTTCAAAAATGAGTAATTCTGGGAATCTTAGT
CATCATCATTTAATTGACtttaaaatatcactttttgCGGTTATTTTCAA
TATCCTGTTATTATTTCTCATAAATTACATAGAGAGGTACAATCTCATTT
gaagtgtttttcaaaataaaagccaTACCTAACGACCATAACACTGACTC
AATTTGTATTACGTAGTGCTTAGTCTTTTATTgggcttattatatgctta
attTAGAAAGTAAAGTTTGATTTACTCAAATCTCTCTGAGCATCTGATAA
TAATTCAAGAAGATCAACAATAAAAAGACTTCACCAAGGTTTTGGTGTTG
GTAAACTAAATTGTTTCAAACTTCTCATTTATTGctttatggacgttgtg
aatgttagGCGGACGTTCAAACAACATATCATCTGTCAGCTATGTGACCA
GTATTGATGACAAATTAAAAGCATGAGTTTTGAAAAGCCGGTCACATAGA
TTCTAGATATGAATTCTTTTACCACGTTCGAGCGTGGGTTGAACTTCCTG
ATGTGATCTACAATTTCTTAATTCAATATgtcatttataaaaatattcat
aaatTGTAATAGATTTGCGGCAGGCAAAATCCTATCGGGAAATGTTCTTT
GATAGATTtccttaaaatataaatatttgatACTTTAATCTTGGAATGAC
GAAATTCGGTTGATGTTTACTTTAAGTAAATACGCCTACTCCTTATCTCA
TTCGTTATATCCGAACATATTGCCCTATCGAATTATCAAACTTCCAAATT
ACATTATTTTTGACATGTTTTCAATAAACTTCACTCTGCCCTAAAACGGC
TTAAAGtatgtccagatataattggcagtggagacaagaatgcctgtaac
ttttgatagtcaaatataattatgaaaatttttttttgcttgttttagag
aatcaaaagcgctatattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNaataccccttggtagcacttttctgtgaaatatcaaa
tctccaatttattactaaaaacgggggttatgttatcttttttgaacagt
gcaagtaaaagttggaaagtgtcggtttattggtattattggtatcattg
attatttcgaaacgaagtgaaatcacagtataattgcttttattgaaaag
ataagcatgaacttatattgcctttgttatttNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagtgctac
caaggggtatttcgggtcccatatcttccgaaggacttttctgtttgcct
tgaaatttaaaaaacttcttaacctaaggtcgAACTatcactggtgtaaa
aatgaatgttatagcataagtggaaaaaagctcaatttttgcaatcgtaa
atttaaccgctaaaagttgcgaatttttcaaccaaaaatacattcaaata
tagcgcttttgattctctaaaacaaccaaaaaaaaattccataattatat
ttgactatcaaaagttacaggcattcttgtttccactgccaattatatct
ggacagactttagttataTTCTTCAGTTTCCATTCTTGTTTTTTACCCAA
CGCCCTTCATTTTATATCGGATAGTTATTTACACATTGAGCTCCAGGATC
TGAGACAGGGTTGTTCATCTCACAGTTTTGAACATAAAGCCTGGACAAAT
GTagagttatcgtccgttacagtgatagtaaaggcggcaAAGTATGGCGG
TagggcgttatggcggtatacagAAAAAATCGgtgggagagtttcgaaga
aacgactGGCAAACTCTAATGGCTATAAACTCTTTTCagcccgtttgcga
attttcttcggctttgttcttattttttagataGTGACTTGTcatagact
atagcatagtctaggaCAATTGGTATTGGTATAAGTTATAGTCTCAGAAC
AAGTTGAAAATGCTATTATATCCAAtgtaaaatctaaaatatttcattaa
CTTCCTTTCTTCGTTTTTAGGAAAATGACATTGAACTTGGTCAAAATTCT
GGCATCATGATTTTATACTCCATCGTTGACCGCACCTCATATGATTATgc
gaaatttgttttaaattatTTATCAGAGAACAATATAACTGGTTACTACC
CTGTCATGCTAATGGGTACTAAACGAGATCTATCACGCATGCGTCAGGTG
GACCGCAAGGAATCATTCAAGGTTGCTACACAATACAATTGTACACCTTT
TGACGTTTCGTCGGCAAGTAATCGACGTGTGACGGAAAGTTTTCATGCAA
TGTTCCGACAAATTGAAATTCGAAATTTATTGAATCAAAATGAAGGTATT
GACGCACCTACCATCGTTAATCCACCTATTGTTGCAAGGTCAGGTAAACT
CCGGTATGGAACTGCATAGGAAAATTCAATCACAAAATAAGAGTCGAATG
AATTTTAACATAACACGGATTTTTAAATGAAGCCGCTGGATTAGAGACAA
GATAAGAGAGAATAACAAATTTATTGAATTATTAATATTATATTGTAACT
CTCTCCTCAAAATCGGCTGTCACAATAATAATTCgatatcatttttattt
taaacttgTCGATATGTATATATAAGATTTGTAATttcatttcgaaaaat
aaagcTGTGCTTTCTAATGAAACGAACCAAAAGAAGTGACATAGAAGTGA
TAAAAACCCATACTCTAAAACCCCATTGGGGCTTAGAGAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012299XLOC_012299Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021915-exon-sc0000400-1491911889:63003..63174TCONS_00021915-exon-sc0000400-1491911889:63003..63174Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1510915933:63003..63174TCONS_00021915-exon-sc0000400-1510915933:63003..63174Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1575043694:63003..63174TCONS_00021915-exon-sc0000400-1575043694:63003..63174Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1491911889:68651..69345TCONS_00021915-exon-sc0000400-1491911889:68651..69345Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1510915933:68651..69345TCONS_00021915-exon-sc0000400-1510915933:68651..69345Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1575043694:68651..69345TCONS_00021915-exon-sc0000400-1575043694:68651..69345Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1491911889:69550..69606TCONS_00021915-exon-sc0000400-1491911889:69550..69606Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1510915933:69550..69606TCONS_00021915-exon-sc0000400-1510915933:69550..69606Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1575043694:69550..69606TCONS_00021915-exon-sc0000400-1575043694:69550..69606Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1491911889:69944..70023TCONS_00021915-exon-sc0000400-1491911889:69944..70023Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1510915933:69944..70023TCONS_00021915-exon-sc0000400-1510915933:69944..70023Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1575043694:69944..70023TCONS_00021915-exon-sc0000400-1575043694:69944..70023Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1491911889:75123..75844TCONS_00021915-exon-sc0000400-1491911889:75123..75844Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1510915933:75123..75844TCONS_00021915-exon-sc0000400-1510915933:75123..75844Clytia hemisphaericaexon
TCONS_00021915-exon-sc0000400-1575043694:75123..75844TCONS_00021915-exon-sc0000400-1575043694:75123..75844Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000400supercontigsc0000400:63003..75844 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0737069	0	0	0	0	0.794744	0.688736	5.29422e-09	0	0.270808	0.850722	8.8803	6.91705	7.02481	11.1924	0	6.58571	2.64894	0.0753536	0	0	9.33462e-06	1.32977	1.37959	0.968852	0.0629919	0.529263	5.03972	8.84041
Blast
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BLAST of TCONS_00021915 vs. Swiss-Prot (Human)
Match: RERG (Ras-related and estrogen-regulated growth inhibitor OS=Homo sapiens GN=RERG PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.925e-20
Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 3 
Query:  828 KIHILGSKSVGKTALTVRFLTGRYIHEYKSAAEETYTRVMKYEDEEVNVKILINDIESMENDIE----LGQNSGIMILYSIVDRTSYDYAKFVLNYLSENNITGYYPVMLMGTKRDLSRMRQVDRKESFKVATQYNCTPFDVSSASNR-RVTESFHAMFRQIEIRNLL 1316
            K+ I G   VGK+AL VRFLT R+I EY    E TY      +DE V+++IL  D    E+ I+    +    G +++Y I DR S++    + N L E        ++L+G K DL   RQV  +E  K+AT+  C  ++ S+ +    +TE F+ + R++  R ++
Sbjct:    8 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEIL--DTAGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMV 173
The following BLAST results are available for this feature:
BLAST of TCONS_00021915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RERG1.925e-2033.33Ras-related and estrogen-regulated growth inhibito... [more]
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