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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021807 ID=TCONS_00021807|Name=TCONS_00021807|organism=Clytia hemisphaerica|type=transcript|length=811bp
CAAATTTCAGTCTAAGTTCTATCAGAACAAGTTATGAGATCTTTGAAGGA
TCATTACTCACCTGTTAGTTCAACTGCAAAGTCACTGTTTAACGTATTCG
CTTTGAAGTATGTGAAATCTTTAGAGTAAAACCAGTCTTTGAAAGTCTCA
TAATCAACTGTATTTGCATAAGGTGGATAGAATTTTACTAGGAGTGTTCG
TGTATGAAATGCCAACCAACATCGGATACGACCCATTCGATGTAGAATGA
AATCCTTTCCCGCTACTGAGGCTGCCATTATGAAAATATCCATAATGCCT
CCTGATATAGTTGTCATGTAACGACCAATAATGGTGAAAGCGACTTGATA
GAAATAAACCACGTGGCTAGGATTATTGATGTGATTGGAGGGGATTTTTT
GAACGTTCGTTTCAGTGATAGCCAATAGTATGTCGACTGTGATCGGATAA
ATAACAAGCCTAACCACGTATTGACCAATGGAaccctttgaaaatatttg
atattCTTTATTGACAACTGCGTCTAGAACATTCACACCAAGTACAGCGA
TTATACTCGGAATTaccaaaacttgaaaaattcgTTTCCTTGTGATTTGA
ACttctaaatttttcgataaacaAAAAACCGAAGCCACCATCCCAACCAA
AAAGAACAATCCACATAAGAAAATGTCTACGTAATAGTATAGTATGACGT
CATTGTATTTCAAGAGGCCTGGTATTAAAGCTGTCGCTATGGGNGTAAGT
GGGATGCTGACGTAgagaatgtttttgaaaatttgtcggcTGCCGTCTAA
AGCGATATTGG Run BLAST on NCBI transcript from alignment at sc0000395:188642..189938+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021807 ID=TCONS_00021807|Name=TCONS_00021807|organism=Clytia hemisphaerica|type=transcript|length=1297bp|location=Sequence derived from alignment at sc0000395:188642..189938+ (Clytia hemisphaerica)
CAAATTTCAGTCTAAGTTCTATCAGAACAAGTTATGAGATCTTTGAAGGA
TCATTACTCACCTGTTAGTTCAACTGCAAAGTCACTGTTTAACGTATTCG
CTTTGAAGTATGTGAAATCTTTAGAGTAAAACCAGTCTTTGAAAGTCTCA
TAATCAACTGTATTTGCATAAGGTGGATAGAATTTTACTAGGAGTGTTCG
TGTATGAAATGCCAACCAACATCGGATACGACCCATTCGATGTAGAATGA
AATCCTTTCCCGCTACTGAGGCTGCCATTATGAAAATATCCATAATGCCT
CCTGATATAGTTGTCATGTAACGACCAATAATGGTGAAAGCGACTTGATA
GAAATAAACCACGTGGCTAGGATTATTGATGTGATTGGAGGGGATTTTTT
GAACGTTCGTTTCAGTGATAGCCAATAGTATGTCGACTGTGATCGGATAA
ATAACAAGCCTAACCACGTATTGACCAATGGAaccctttgaaaatatttg
atattCTTTATTGACAACTGCGTCTAGAACATTCACACCAAGTACAGCGA
TTATACTCGGAATTaccaaaacttgaaaaattcgTTTCCTTGTGATTTGA
ACttctaaatttttcgataaacaAAAAACCGAAGCCACCATCCCAACCAA
AAAGAACAATCCACATAAGAAAATGTCTACGTAATAGTATAGTATGACGT
CATTGTATTTCAAGAGGCCTGGTATTAAAGCTGTCGCTATGGTGACAAGT
GGGATGCTCACGTAgagaatgtttttgaaaatttgtcggcTGCCGTCTAA
AGCGATATTGGTGATAAAGACGGAAGTGGTTGAGAGGAGAAtctgaaaag
aaatgaaaaagagaaatatttttcaggattgagCTCTTCCAGAAAGTTTT
TGTACATGAGGGTGGaggcatagatttataaagcccgaagggctagatat
cgtgcttttgctgaaaattgtgccgaggttaggtaggtaGGAAGGAGgta
ggttaggtaggaaatcctacctaagttacgtgacattacaatagaattta
gggttttcgaaaacaatagcagcaatatttttttcgatattcactttttt
tttgcttggaagagcttaaagcactccatctagcccttcaggctttataa
atctatgggtggaggatatattggatatgtTGTCGAGGGGAGGGGagtga
aaaatctgtaaattttGCTGTGATTAGGGNGTAAGTGGGATGCTGACGTA
gagaatgtttttgaaaatttgtcggcTGCCGTCTAAAGCGATATTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021807-exon-sc0000395-1491911889:188642..189382 | TCONS_00021807-exon-sc0000395-1491911889:188642..189382 | Clytia hemisphaerica | exon |
| TCONS_00021807-exon-sc0000395-1510915933:188642..189382 | TCONS_00021807-exon-sc0000395-1510915933:188642..189382 | Clytia hemisphaerica | exon |
| TCONS_00021807-exon-sc0000395-1575043694:188642..189382 | TCONS_00021807-exon-sc0000395-1575043694:188642..189382 | Clytia hemisphaerica | exon |
| TCONS_00021807-exon-sc0000395-1491911889:189869..189938 | TCONS_00021807-exon-sc0000395-1491911889:189869..189938 | Clytia hemisphaerica | exon |
| TCONS_00021807-exon-sc0000395-1510915933:189869..189938 | TCONS_00021807-exon-sc0000395-1510915933:189869..189938 | Clytia hemisphaerica | exon |
| TCONS_00021807-exon-sc0000395-1575043694:189869..189938 | TCONS_00021807-exon-sc0000395-1575043694:189869..189938 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000395 | supercontig | sc0000395:188642..189938 + |
Blast
The following BLAST results are available for this feature:
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