TCONS_00021710 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021710
Unique NameTCONS_00021710
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1736

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021710 ID=TCONS_00021710|Name=TCONS_00021710|organism=Clytia hemisphaerica|type=transcript|length=1736bp
cccccccccctgggtctTGCCACAACAAATATCTTACAGAATTTTCTCTC
TCGTTGTAATTATTTCTTAGTTTCTTAGTGTTAATCCTATGTTCCCGTTT
CTGTTGTAGAACAtataaaaaaactaacaaatCCGATCAGAACTTTGGAT
GACTGCAAAACAACTGTGAATATCactcaaattttgaattttggttcaat
tccacaaagaaaaaaactacATAACTAAGATAATTCGGAAAACTGGAGTA
ATTgagaaaagaaaactttcaaataattACTGGAAAATATGTCAGGAATG
GATTTCTTCTCCCGTAGCAATGCAGCAAAACCGACTGCAATGCAATGTAC
ATGGCGTACCTATGGCTGTCTAAAAGAGTTCAACAACCAAGACGATAAAA
TCGTCCATGAAGCCACCTGTCAAGTTACAAATATCAGTTATGCCAAAGtc
aaagaaacaaataaaattgTCGATCTTCGGGACAAAGCTAAAGAAATCTA
CAAGCTAAGAATCCCAGGAGTAGAAGCAAGACGTGATAAATTGGCTGAAA
TACATAGTAATTTAACTGAAGAATTGAGAATTGAAGTAGACAAGAAACAA
GAAAATGAACAAAGgcTTGGCATAGTTACAACGGATACTGGTGAACGAAA
AGTCGTTTATTTTAAAGATTTAGTCACACTTATCCAACAAGATGACCTCG
AAACTTTCGTCCAATACACAGCAACGGCAGAAAACCTTTTCAAATTAGTT
GATGGTAGTGGTGACACCCTCTTACACCATGCAGCCCAAAAGAAACGCCC
TGAAATTGCTTTCTGGTTAATTCAAAATGGTTTAGAACCAAGCACCAAAG
ATCACAATGGATTCAATATCGCTCAAATAGCTGTTAGCATTGATACGTTA
CCCATATTGAAGGTAGCTTTAGATACAGACTCTTCTTTGACCAATATCCA
GGACGGAAATGGCGCCACCTTATTGCACTGGGCCCTAGAGTTAGACCACG
TGGAAATAGCTAAGTACTTATTATCAAGAGTAGACCTTGACGtggatttg
aaaaataattcggATAAAAAACCAGATGAGATTGATGgtttgaataaaga
aatgaagaaattgaTCAAAAATCATCGATAAATAAAATGGTTTATCTGTC
AAACGTCAATAAGTAGCCGACAATCTCTGGTAGAAAAAACCTCCAAACAT
TGTGCTTTTCCTGAAGACTTACGGATTCGCTAACTATGAAATATCAGACC
TTACAGATTCGCTAAGTGTAAAATGTTATACTTTACGGATTCGCTAAGCG
TATTTCATGTTTGAAATTTGTTAAGTACAAAtctgaagtttttaaaaaat
ttgaaaagtctCCAAAAATCTTAATATTATagaccttatcagagtttttg
atttttctaaaaaagcgatgcattgtgggattgtttcgagcgaatcacaa
tagaattccctcgaggaattcctaagagatttctattgtaatacactcga
aacaatgcatcgcttttttagaaaaatcaaatttcatatattttacaaga
atttgagaattatgaaaatattttctaacaTTTTATAATCTATCATTTCA
CAGCATAAACACTTGTATTTATAGTAAAATATACTAATTTTATAGGCCCT
TAtcgttcattttttttgtaacttCGCCTCAAATTTTGACTTAGACTGTG
CTATAGtttaagacaaatcactatctaagaaataag
Run BLAST on NCBI

protein sequence of TCONS_00021710-protein

>TCONS_00021710-protein ID=TCONS_00021710-protein|Name=TCONS_00021710-protein|organism=Clytia hemisphaerica|type=polypeptide|length=280bp
MSGMDFFSRSNAAKPTAMQCTWRTYGCLKEFNNQDDKIVHEATCQVTNIS
YAKVKETNKIVDLRDKAKEIYKLRIPGVEARRDKLAEIHSNLTEELRIEV
DKKQENEQRLGIVTTDTGERKVVYFKDLVTLIQQDDLETFVQYTATAENL
FKLVDGSGDTLLHHAAQKKRPEIAFWLIQNGLEPSTKDHNGFNIAQIAVS
IDTLPILKVALDTDSSLTNIQDGNGATLLHWALELDHVEIAKYLLSRVDL
DVDLKNNSDKKPDEIDGLNKEMKKLIKNHR
Run BLAST on NCBI

transcript from alignment at sc0000393:183700..190179+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021710 ID=TCONS_00021710|Name=TCONS_00021710|organism=Clytia hemisphaerica|type=transcript|length=6480bp|location=Sequence derived from alignment at sc0000393:183700..190179+ (Clytia hemisphaerica)
cccccccccctgggtctTGCCACAACAAATATCTTACAGAATTTTCTCTC TCGTTGTAATTATTTCTTAGTTTCTTAGTGTTAATCCTATGTTCCCGTTT CTGTTGTAGAACAtataaaaaaactaacaaatCCGATCAGAACTTTGGAT GACTGCAAAACAACTGTGAATATCactcaaattttgaattttggttcaat tccacaaagaaaaaaactacATAACTAAGATAATTCGGAAAACTGGAGTA ATTgagaaaagaaaactttcaaataattACTGGAAAATATGTCAGGAATG GATTTCTTCTCCCGTAGCAATGCAGCAAAACCGACTGCAATGCAATGTAC ATGGCGTACCTATGGCTGTCTAAAAGAGGTATGGATATACTATtcttccc agtccttttttaaTGGTCCAGTTACATGTAATAAGTGATGCCAGTAAAAT AGTGAGTCTATTTGACCCGGTGGTACCTTGTCTgtacagacccagtatct acagctaatttcaaaattcattgccgtagagggtctgttgtcattgtctt ttctcatttgagattttttaaaccgACCGCTACGATGGAGTGTTGGCGAG AGAGGGGTCAGGCGATAGATAAGAGttgtgttgctatttataaatcatac ttcatcgcagaggtctccgtacggggatttttttcatcaaacagacaatg caccCAGAGTGTACTAtgaaacgataaacgtgagatacactctggtacag tgTAGTGGTACCCAAACCACACTGGAAGATTTGACCAGAATTTTATCTTC AACGTGGAGAAAATACTCTTCAAGTTTATAGCTTTCCTGGGGGAAGTTGA CTTCAACTTTTTCCCTAATTGAACTGGGAAAAATGCACTTCAAACCACCC CCAACTAGAAATTTATGAGCTGGGAGCATTAGAACTTTTAATCCAATTGC aggggttttgctttgtttttggtaggctggcgaatgaaaaaaattaactc tggcgatttctagattctaggccggcgaattcttagcaagcccaacgtat tgattagcgtaaaaaaaaaaaatgaaaaagcgtAAAAAATGTACTTGAGG CGGCGAACCGAACTTTTCGAACGGCGAAATGTAATTTTTCCCTTACCTTG GACCGGCAAACTTTGCCGTTCGCCGGGCCTAAATAAGACCCCTGCAATCG GGATTTTGAACGAAACTTTTATCCCCACGGTTGGAAAAGTTTCACCGGTG CACTGAGAAAAGGGTGTATTTGTGTGACATGGCTTTTCTCGGTAACCAGT GAAAGTTGAAAACTTATTTGCaggaaattcaaatttgataaaaactcTTT TTATACACGGTACACTGGTAGTAAATACAAATGTTACAAGACTAAGATTT AAATTTCAACATAGGGAATCAACAACGAAATGACTCACCAATTTTTCCTT TTGGAATACAGTCGAGTCTATGTTCGCGCGTAACAGTTCCGTTTCGcacc gaaacgaaatgaagccattctattggttgaatTCAAGTTGTACGTCATTT CCAACCAATAGAATGGTATCGTTTCGTTTCAGAACATAGTCTGAGTCTCC ATAACTtaaacacgcacggggaacacaaatttgtccGATTTCAGGAAATT TCGAGTAATTGAGCATAAGttttataaggtattgttaactgaagggacga gaaaacttgttcgagttaagggggcagtcgagttatagaggttcgagtta aagagactctactgtattttaTTTCCAGTTCAACAACCAAGACGATAAAA TCGTCCATGAAGCCACCTGTCAAGTTACAAATATCAGTTATGCCAAAGtc aaagaaacaaataaaattgTCGATCTTCGGGACAAAGCTAAAGAAATCTA CAAGCTAAGAATCCCAGGAGTAGAAGCAAGACGTGATAAATTGGCTGAAA TACATAGTAATTTAACTGAAGAATTGAGAATTGAAGTAGACAAGAAACAA GAAAATGAACAAAGGTATTTGATTGGTTTATACCGGGTGTCTCAGAAAAA AGTCTCCCTCTTATACCCTCATTTTTCgcctttttcgacttttttgaaaa gtaatattttaacattttaggccataacttttgatgtagttgaccaaatt tgacaaatgaccccttaaaatttaagtttatccttcctttttccaatgca aaaggatCGATTCTTTAACAGTTCATAGTACTCAGGAAATCTCACTTCAA AGagggggacttttttctgggacatgCTTTTTCTgttcatcctctagcga aaaaaaatcatatggGATGTATATCTATAGGTCTATGATTCAGACTATAA TTTTGTTTGTAGAGTTTTTTAATCGTTTTCAAGGTTCATTGTGAATATGC CTGTTACACGTCTTTtatattataagaatatccaaagtttttgaagcctt cgaatgttcttaatgGGACATAAAattagtaaaatgtaaacattgcgcga accacgtgtcattaaagagaacaattgaaATCACgcgtccaaaacaaact tgtaaaacaattgatgaatcaaaattagccatatttggtttgatttttgg acctaccgggaggtcctttaatttgaccgttgtccgttcgtctgttacaa gcttttctcgggattagctcattagtttttttttattttttagtgcaagg taccctaaaaagtggctgaagtaatttttctcggaaaattttttttcgtc gtaaaatacggattttcgttttttggggaaattcccttttaccattttcc tgttagcagctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctcgggattggctca ttagttttttttaattttttgcacaatgatacaaaatagcaatgcctaaa aagtgacggagcccgatttttgaaaaaaaaatttcgggggcaaatttggg tcaaaaactacctaaaaataaggttttttggactttgtgcaaaaatgctt cattagtttttcttgatttttggcagaaagatagagtgcaaggcacccta aaatgtggctgaagtaatttttctcggaaaattttttttcgtcgtaaaat acggATTTTCGCAAGTTTGGGCCAAAAACTACCTAAAAATAAGGTttttt ggacttggtgcaaaattgcttcattagtttttcctgattttatgtataaa gatggagggcaaggttctctaaaaagtggctgaagcagtttttttcggaa attttttttggccgtaaaaatcggattttcttattcggggaaattccctt atatcatttttagggaaaaagagcatttctTGCGATTGGATTGATANNct gtgaaattgcttcattagttttttctgatttttggagaaagatgaagggc aaggttctctaaaacgtgactgaagtagttttttttcggaaaatttattt tggccgtaaaaatcggattttcttatttggggaaattcccttttgtcata tttagggaaaatgagcatttctcgagattggcttggtatttttttcttat tttttgtatagtggtaatttgggtagaaaagtgcctaatgtttgtttttt ttttagacttttttgactaatttgagTTCTGAAACtcacggtaatctatt caagctgctcactacactttcttattcccttgctatttgtcctatttttt tctgattttgatcgacaggtaggtccattcagcatNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCttgtttattt tgacatgtgacatttgttttgattttgtatccgctgcatacagtttgttt acaaatttcgcaagtactgttatgtccctttaaattcTTTGCAATATTCA CTTTTTATTGCTTGGAAAAACCTCCAAACACGccatttagcccttcgggc tttgcAGAAATCTTCTAATTTACCCATGCGATGTCACACAGCTGGCACAC GAAGTAACTTTAACTTTCGTATGCTTTATTCTCTTAAatatagttgacgc tctctaattcgacgttctactattcgatacgctccattgttcgataatat tgaaagtcaccgtcaacaagaaaccctcataaacgacgctctactatttg atacactcccttattcgatgaaaacccttttccccttgaaaatcgaatta gagagcatcaactcaAAGGGCAGttgtttcgatgtttttgtCTGCCATGT GTTTGCTGTGATATACAAGGGAATTCGTACAACCTATGTTTTCGTGAATt ggaattgtattttttttcaggcTTGGCATAGTTACAACGGATACTGGTGA ACGAAAAGTCGTTTATTTTAAAGGTATGATAAGTACActtttcccgtaat tcaaaacTGGAGCCGCACTCCATCACtttgttgggggggggggcagacaA ACGTTTTACATGTGAGGGGTTaaggaaagtgggttttcagcaTCAAACTT TGGACATTGATCTTTGTTCATtttggggaaaaaattttaGGTTCATGCAT ATCATAAACACTTGAAAATTTGAGAGGGTTTTGTTTGACCGAACTTACga aaagctcataaaagatGAACTTTTCCTGAGGAAACACAGTCAAAAACGTA CTTGTTCACTTCCACAGATCAAACAGTGGAAAGCAATAAAATATATGCGC AACTGTTTTGCGGATTGTTGGAATGGTGTATTTgtatttgaatatttctg atagggtttattttatgttttattgtATGGGACAAAGTTAATGTTTTGCT AAATTCGACCAAATCGTACTGTGAAGCGTCAAGTTTTTTAGATACTGTCG TTTTTATTTGTACTTTTCAACGCTACTGGGTGCTGGCCCCTTCTTTTTTG TGCCTAATAAACAGGGTGGTAGGAAATCAAAGGGGGTactggaaaaatct ttaaatcttaataaacgggggacctaaataaacggggggagtTGGACATT GTACCTCTAGATACCTCCAAAATAAAGTActggctatttagagcaaaata agggacccATCCTTTTACAGCtgaaagtattttcaaaaattaataaatgg ggGTCTAAATAAGGTCCGAggaggttggaaaaaaattaaacttaccAAGC GGGGGGCAGGCGTCTATGAAAGTAGCTTTAATGAGTGTAATTACCTTTTT ATTACCATTAGATTTAGTCACACTTATCCAACAAGATGACCTCGAAACTT TCGTCCAATACACAGCAACGGCAGAAAACCTTTTCAAATTAGTTGATGGT AGTGGTGACACCCTCTTACACCATGCAGCCCAAAAGAAACGCCCTGAAAT TGCTTTCTGGTTAATTCAAAATGGTTTAGAACCAAGCACCAAAGATCACA ATGGATTCAATATCGCTCAAATAGCTGTTAGCATTGATACGTTACCCATA TTGAAGGTAGCTTTAGATACAGACTCTTCTTTGACCAATATCCAGGACGG AAATGGCGCCACCTTATTGCACTGGGCCCTAGAGTTAGACCACGTGGAAA TAGCTAAGTACTTATTATCAAGAGTAGACCTTGACGtggatttgaaaaat aattcggATAAAAAACCAGATGAGATTGATGgtttgaataaagaaatgaa gaaattgaTCAAAAATCATCGATAAATAAAATGGTTTATCTGTCAAACGT CAATAAGTAGCCGACAATCTCTGGTAGAAAAAACCTCCAAACATTGTGCT TTTCCTGAAGACTTACGGATTCGCTAACTATGAAATATCAGACCTTACAG ATTCGCTAAGTGTAAAATGTTATACTTTACGGATTCGCTAAGCGTATTTC ATGTTTGAAATTTGTTAAGTACAAAtctgaagtttttaaaaaatttgaaa agtctCCAAAAATCTTAATATTATagaccttatcagagtttttgattttt ctaaaaaagcgatgcattgtgggattgtttcgagcgaatcacaatagaat tccctcgaggaattcctaagagatttctattgtaatacactcgaaacaat gcatcgcttttttagaaaaatcaaatttcatatattttacaagaatttga gaattatgaaaatattttctaacaTTTTATAATCTATCATTTCACAGCAT AAACACTTGTATTTATAGTAAAATATACTAATTTTATAGGCCCTTAtcgt tcattttttttgtaacttCGCCTCAAATTTTGACTTAGACTGTGCTATAG tttaagacaaatcactatctaagaaataag

Coding sequence (CDS) from alignment at sc0000393:183700..190179+

>TCONS_00021710 ID=TCONS_00021710|Name=TCONS_00021710|organism=Clytia hemisphaerica|type=CDS|length=3372bp|location=Sequence derived from alignment at sc0000393:183700..190179+ (Clytia hemisphaerica)
ATGTCAGGAATGGATTTCTTCTCCCGTAGCAATGCAGCAAAACCGACTGC
AATGCAATGTACATGGCGTACCTATGGCTGTCTAAAAGAGTTCAACAACC
AAGACGATAAAATCGTCCATGAAGCCACCTGTCAAGTTACAAATATCAGT
TATGCCAAAGtcaaagaaacaaataaaattgTCGATCTTCGGGACAAAGC
TAAAGAAATCTACAAGCTAAGAATCCCAGGAGTAGAAGCAAGACGTGATA
AATTGGCTGAAATACATAGTAATTTAACTGAAGAATTGAGAATTGAAGTA
GACAAGAAACAAGAAAATGAACAAAGgcTTGGCATAGTTACAACGGATAC
TGGTGAACGAAAAGTCGTTTATTTTAAAGATTTAGTCACACTTATCCAAC
AAGATGACCTCGAAACTTTCGTCCAATACACAGCAACGGCAGAAAACCTT
TTCAAATTAGTTGATGGTAGTGGTGACACCCTCTTACACCATGCAGCCCA
AAAGAAACGCCCTGAAATTGCTTTCTGGTTAATTCAAAATGGTTTAGAAC
CAAGCACCAAAGATCACAATGGATTCAATATCGCTCAAATAGCTGTTAGC
ATTGATACGTTACCCATATTGAAGGTAGCTTTAGATACAGACTCTTCTTT
GACCAATATCCAGGACGGAAATGGCGCCACCTTATTGCACTGGGCCCTAG
AGTTAGACCACGTGGAAATAGCTAAGTACTTATTATCAAGAGTAGACCTT
GACGtggatttgaaaaataattcggATAAAAAACCAGATGAGATTGATGg
tttgaataaagaaatgaagaaattgaTCAAAAATCATCGATAAATGTCAG
GAATGGATTTCTTCTCCCGTAGCAATGCAGCAAAACCGACTGCAATGCAA
TGTACATGGCGTACCTATGGCTGTCTAAAAGAGTTCAACAACCAAGACGA
TAAAATCGTCCATGAAGCCACCTGTCAAGTTACAAATATCAGTTATGCCA
AAGtcaaagaaacaaataaaattgTCGATCTTCGGGACAAAGCTAAAGAA
ATCTACAAGCTAAGAATCCCAGGAGTAGAAGCAAGACGTGATAAATTGGC
TGAAATACATAGTAATTTAACTGAAGAATTGAGAATTGAAGTAGACAAGA
AACAAGAAAATGAACAAAGgcTTGGCATAGTTACAACGGATACTGGTGAA
CGAAAAGTCGTTTATTTTAAAGATTTAGTCACACTTATCCAACAAGATGA
CCTCGAAACTTTCGTCCAATACACAGCAACGGCAGAAAACCTTTTCAAAT
TAGTTGATGGTAGTGGTGACACCCTCTTACACCATGCAGCCCAAAAGAAA
CGCCCTGAAATTGCTTTCTGGTTAATTCAAAATGGTTTAGAACCAAGCAC
CAAAGATCACAATGGATTCAATATCGCTCAAATAGCTGTTAGCATTGATA
CGTTACCCATATTGAAGGTAGCTTTAGATACAGACTCTTCTTTGACCAAT
ATCCAGGACGGAAATGGCGCCACCTTATTGCACTGGGCCCTAGAGTTAGA
CCACGTGGAAATAGCTAAGTACTTATTATCAAGAGTAGACCTTGACGtgg
atttgaaaaataattcggATAAAAAACCAGATGAGATTGATGgtttgaat
aaagaaatgaagaaattgaTCAAAAATCATCGATAAATGTCAGGAATGGA
TTTCTTCTCCCGTAGCAATGCAGCAAAACCGACTGCAATGCAATGTACAT
GGCGTACCTATGGCTGTCTAAAAGAGTTCAACAACCAAGACGATAAAATC
GTCCATGAAGCCACCTGTCAAGTTACAAATATCAGTTATGCCAAAGtcaa
agaaacaaataaaattgTCGATCTTCGGGACAAAGCTAAAGAAATCTACA
AGCTAAGAATCCCAGGAGTAGAAGCAAGACGTGATAAATTGGCTGAAATA
CATAGTAATTTAACTGAAGAATTGAGAATTGAAGTAGACAAGAAACAAGA
AAATGAACAAAGgcTTGGCATAGTTACAACGGATACTGGTGAACGAAAAG
TCGTTTATTTTAAAGATTTAGTCACACTTATCCAACAAGATGACCTCGAA
ACTTTCGTCCAATACACAGCAACGGCAGAAAACCTTTTCAAATTAGTTGA
TGGTAGTGGTGACACCCTCTTACACCATGCAGCCCAAAAGAAACGCCCTG
AAATTGCTTTCTGGTTAATTCAAAATGGTTTAGAACCAAGCACCAAAGAT
CACAATGGATTCAATATCGCTCAAATAGCTGTTAGCATTGATACGTTACC
CATATTGAAGGTAGCTTTAGATACAGACTCTTCTTTGACCAATATCCAGG
ACGGAAATGGCGCCACCTTATTGCACTGGGCCCTAGAGTTAGACCACGTG
GAAATAGCTAAGTACTTATTATCAAGAGTAGACCTTGACGtggatttgaa
aaataattcggATAAAAAACCAGATGAGATTGATGgtttgaataaagaaa
tgaagaaattgaTCAAAAATCATCGATAAATGTCAGGAATGGATTTCTTC
TCCCGTAGCAATGCAGCAAAACCGACTGCAATGCAATGTACATGGCGTAC
CTATGGCTGTCTAAAAGAGTTCAACAACCAAGACGATAAAATCGTCCATG
AAGCCACCTGTCAAGTTACAAATATCAGTTATGCCAAAGtcaaagaaaca
aataaaattgTCGATCTTCGGGACAAAGCTAAAGAAATCTACAAGCTAAG
AATCCCAGGAGTAGAAGCAAGACGTGATAAATTGGCTGAAATACATAGTA
ATTTAACTGAAGAATTGAGAATTGAAGTAGACAAGAAACAAGAAAATGAA
CAAAGgcTTGGCATAGTTACAACGGATACTGGTGAACGAAAAGTCGTTTA
TTTTAAAGATTTAGTCACACTTATCCAACAAGATGACCTCGAAACTTTCG
TCCAATACACAGCAACGGCAGAAAACCTTTTCAAATTAGTTGATGGTAGT
GGTGACACCCTCTTACACCATGCAGCCCAAAAGAAACGCCCTGAAATTGC
TTTCTGGTTAATTCAAAATGGTTTAGAACCAAGCACCAAAGATCACAATG
GATTCAATATCGCTCAAATAGCTGTTAGCATTGATACGTTACCCATATTG
AAGGTAGCTTTAGATACAGACTCTTCTTTGACCAATATCCAGGACGGAAA
TGGCGCCACCTTATTGCACTGGGCCCTAGAGTTAGACCACGTGGAAATAG
CTAAGTACTTATTATCAAGAGTAGACCTTGACGtggatttgaaaaataat
tcggATAAAAAACCAGATGAGATTGATGgtttgaataaagaaatgaagaa
attgaTCAAAAATCATCGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012179XLOC_012179Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021710-exon-sc0000393-1491911889:183700..184077TCONS_00021710-exon-sc0000393-1491911889:183700..184077Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1510915933:183700..184077TCONS_00021710-exon-sc0000393-1510915933:183700..184077Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1575043694:183700..184077TCONS_00021710-exon-sc0000393-1575043694:183700..184077Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1491911889:185478..185713TCONS_00021710-exon-sc0000393-1491911889:185478..185713Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1510915933:185478..185713TCONS_00021710-exon-sc0000393-1510915933:185478..185713Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1575043694:185478..185713TCONS_00021710-exon-sc0000393-1575043694:185478..185713Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1491911889:188220..188272TCONS_00021710-exon-sc0000393-1491911889:188220..188272Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1510915933:188220..188272TCONS_00021710-exon-sc0000393-1510915933:188220..188272Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1575043694:188220..188272TCONS_00021710-exon-sc0000393-1575043694:188220..188272Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1491911889:189111..190179TCONS_00021710-exon-sc0000393-1491911889:189111..190179Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1510915933:189111..190179TCONS_00021710-exon-sc0000393-1510915933:189111..190179Clytia hemisphaericaexon
TCONS_00021710-exon-sc0000393-1575043694:189111..190179TCONS_00021710-exon-sc0000393-1575043694:189111..190179Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021710-proteinTCONS_00021710-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:183700..190179 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.6851 37.8248 51.9333 48.2698 2.57676 2.16835 12.2073 10.7742 6.774 7.51603 5.15089 5.3766 5.24904 5.03043 2.60571 3.24893 10.7733 17.3532 10.1799 10.3773 7.06354 7.71518 17.8658 17.2844 5.08708 5.50173 3.19279 2.95026 6.82835 7.8258
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021710 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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