TCONS_00021647 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021647
Unique NameTCONS_00021647
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1505

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021647 ID=TCONS_00021647|Name=TCONS_00021647|organism=Clytia hemisphaerica|type=transcript|length=1505bp
tttagatcattgaaaaaaaaattctaaatgaGTACAGTGATACACAAACG
TTTGAAAGATGCTTTGGAGGTCGGCCATGTGTTGGAGAAAGATCAGAGAA
GTCAACAATACATGAGGAGgtCATTGGAGATCAACCATCATAAAGATTAC
CACGTTGGCGACGAGAATGGTGTGTTTAGTATCGCACTCAATCATGATGG
TAGACATGCTGCTATTGGTCTTGGAAGTGGTAGTTTTGCTCTTTACAACA
GTCAAAATGAAGAGTGGAAAAAGATTCGACGAGTGCGCACTGACCCAACC
GTCAGTTTACCTCTCCTAGCAATGAAATTCTATCCATGTAAAGCGCACAA
TGCTATATACACCGGTGGATCAGATGGTACGATCAAAGTGTTTAACCTGG
ACACGTTCTCACACGGTGAAAGAACAGTCACGGAGAAGAACAATCAAATC
ACTTCGTTGGATTTCAGTAATGATGGACTTTATTTTGCCACAGGTGGAAA
GgatTGTAGCTTGCGAGTTTATCACACTGACAATTTAAATCTTTCGAGAT
TATACTCCGGTGCTGACGAGCTTGATTTGGAAGGGTCAGGCCATGACTTA
TCCATCGCATCCGGCCATTCCAAAAAGATCTTTGTTATCAAATTTCATCC
CGAAGATCGAAATGTATTCCTGTCTGCAAGCTGGGACCGAACTGTCAAGA
TCTGGGATTTGAGAACGGAGTACGCCGTGCGCACAATTAATGGTCCTTAC
GTATGCGGTGACGGTGTAGATCTTTTCCAAGGGAAAATTGTTAGTGCGTC
GTGGAAAGCCCAAGATGCCTTGCAGCTTTGGGATTACGGTAGTGGTAAGC
TGATTTCCACCTTGAGCTGGCCTACAACAAACAGACGTGGAGAGTATTTG
TATTGTGCAAGGTTTTGGGATAACAGCCATGTAGTGGCTGGTGGAAGTGG
AACGAACGATCTGAAAATGATTAATATCACTTCGAATGAGGTTGCAGGTG
AAATTTCTGGTGATGGGCACCCAGTACAAGCAGTGGAAGTCTTGGAACAA
AAGAACATGTTAATATGTGGTACAAGTGTAAATACGTTAAAAACAGCCAT
TATTACCGATGACGATGCAGAAGCTGACGTTCTATTGTATTGATTGGTGT
CTGATATTCCCAGTGCAATAATTTTTCCCCTTTTTAACTCTTTTTGGGAA
CAGGGGTCTAACTTCGAACGTTGATGGTGAAAAACCTTCCCCTCCAAAGA
GTTCGCAGTTACGTGACAAAATAAATGTCCATCCAAGTGACTAAAttcta
ccttattggtatatattttcgcgtgttacaaattttcgcgaatcgcgaaa
ttttttggaaaatacgtgtttcgcgtgtattaaatttcgcgattgccgac
ttctggaaaattttcgcgtgtattaaatttcgcaattcactaaactaggt
attttcagaaagtgggaatataaagcaagaaaaagactgattttgcttga
aacac
Run BLAST on NCBI

protein sequence of TCONS_00021647-protein

>TCONS_00021647-protein ID=TCONS_00021647-protein|Name=TCONS_00021647-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
MSTVIHKRLKDALEVGHVLEKDQRSQQYMRRSLEINHHKDYHVGDENGVF
SIALNHDGRHAAIGLGSGSFALYNSQNEEWKKIRRVRTDPTVSLPLLAMK
FYPCKAHNAIYTGGSDGTIKVFNLDTFSHGERTVTEKNNQITSLDFSNDG
LYFATGGKDCSLRVYHTDNLNLSRLYSGADELDLEGSGHDLSIASGHSKK
IFVIKFHPEDRNVFLSASWDRTVKIWDLRTEYAVRTINGPYVCGDGVDLF
QGKIVSASWKAQDALQLWDYGSGKLISTLSWPTTNRRGEYLYCARFWDNS
HVVAGGSGTNDLKMINITSNEVAGEISGDGHPVQAVEVLEQKNMLICGTS
VNTLKTAIITDDDAEADVLLY
Run BLAST on NCBI

transcript from alignment at sc0000391:13104..19146-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021647 ID=TCONS_00021647|Name=TCONS_00021647|organism=Clytia hemisphaerica|type=transcript|length=6043bp|location=Sequence derived from alignment at sc0000391:13104..19146- (Clytia hemisphaerica)
TTTAGATCATTGAAAAAAAAATTCTAAATGAGTACAGTGATACACAAACG
TTTGAAAGATGCTTTGGAGGTCGGCCATGTGTTGGAGAAAGATCAGAGAA
GTCAACAATACATGAGGAGGTATCTTTAAAGCCCCCCTTTAAAGGTTTTA
TTTTTACATAAGTGTTCCCGTTTCATATCAGACACATGTTTCATATCAGG
ACAGTGTCTGCTTATTGTTATATTGTGCTGATATGAGCAAAAAAAAAAAT
TTCTATTCTTCTTTCTGACCAGTCTTGCTCCACTCCGTGTCAATTCAATA
TCAAAAAGCTTGTAAGTTAAAATTGACGAGTAAGCAAAGGATATCATTCT
TATTTAGAAACAAATCCTTTAAGCAAAAGGTTACCTGCATAATAAAATTT
AGAGGCCAACTGTGCCAACTGTGCGCCTACAAAATGTTAAATATGATTAT
TTCATAGAGGTCGATAGACCTGCGAAATATATTACTATAAATAAAAATAA
TTACTCTCGAGCCCTCTCTTTGAATATGTAGCTCTTGGAGGTTTCTAAAA
TCTTTAAAAAAAGCTTACCATATATTGCCGTAAGGGAACTAATTTTGGCG
AATATTACGAACTTCGTTCTCGTCAAAATAAAAAAAGGTGAGCTTCGGCG
CTTTAACTTATAAAGATTTTTGGGAATAGACAGGTAATGGCCTTGAAATT
AACACGCAAAAAAATAACACGAACTTTTTTGCTTTTTTAAGGACAAAATG
GCTGGTTTTATTAAAAGTGGTGTTAATTAACACCAATCATTTTAGTTTGT
GTTGATTACATGTCTACTCAGGTCTACTTAATTCCCGTGCAACTAAATGC
TTAAGATATTAAGTCTACCATTTTAGGTCATTGGAGATCAACCATCATAA
AGATTACCACGTTGGCGACGAGAATGGTGTGTTTAGTATCGCACTCAATC
ATGATGGTAGACATGCTGCTATTGGTCTTGGAAGTGGTAGTTTTGCTGTA
AGAATTGAAATTGTACTATTGTTTCTTGATTATTTGGCTAATGTCTTTTA
ATTTACCCGATTTACTCGTATTTTTATGTTGTTATATACACCTTTTCGAC
CTTAGCCGCCAATTGCCGCGCGGGCATTTTTTGTCCGTTTTGCCACCCTA
AAACTGTCCCAGTCTTTTACCTTCGCACTTATAGACAATAAAGGTACAAC
AAAGGATTGGATCGAGTTTCGGGGGAGAATTAAAAAGTGGCACGCACCTG
ACCGCGTGACTTCGGTCGAAAAGGTGTATTTAAGGGAACATTGACGGAGT
TACATTTATACATTAAATTTCCAGTTTACTCTTCTGTACTGGAATTATTT
CAGGGGGTCAGTTTGGAACTTTTGGGAAACCAATGGAAGGAAAGTAGTCC
TCTTACATCATAAATTATATAACAGTTTGTATATACATCTGTTGTGAACA
GAGTCATTCGATTCGGCTCAAGAACGATTTCTGGTCTGGAATTTTAACAT
TTAAATTATAAATTGGTCTACNCGGCTCAAGAACGATTTCTGGTCTGGAA
TTTTAACATTTAAATTCTAAATTAGTTTATTGACTCATTCTCCATTGCAC
AGCTTTACAACAGTCAAAATGAAGAGTGGAAAAAGATTCGACGAGTGCGC
ACTGACCCAACCGTCAGTTTACCTCTCCTAGCAATGAAATTCTATCCATG
TAAAGCGCACAATGCTATATACACCGGTGGTAAGTGGATAGCTTTCATTT
TAGTTCATGATTGTTAGGAGGACTCAGTTGTGTAGTGGTCATTGACCTTG
CTTTCCATGTTAGAGGATTACATTCAACCACAAGTGGTGGTGCTAAAACG
CTCTTCTGATTACGAATCCTGCAGTTTTTAGCTAAAAAGAATGAAATTAT
TCGAAAGCTTCGTGCTCGCTGTGTTACTTTTGAAACAAATATTACTCATT
TTAATGAGAGGGATAAAATCGAAATTTTGGAACACTGCCTCCCAATTTTC
CCCAATTTTTTACTATCCGCCACCAAGCTACTGGTATAAAGTATCAGATT
TTCAAACAAATTTCTCTTATGGAAAACAAGGTCATTGCAATGTATTTACA
ATTTAGATGTCCTACCAATCTCTACACATTTTTCAACATAATCACCTTCT
TACCTAACAGGATCAGATGGTACGATCAAAGTGTTTAACCTGGACACGTT
CTCACACGGTGAAAGAACAGTCACGGAGAAGAACAATCAAATCACTTCGT
TGGATTTCAGTAATGATGGACTTTATTTTGCCACAGGTGGAAAGGTATCC
AAATTTTCTGTTTTGCTTAAGACCCCCCCCCCTCCGTTCCATTAAAATGT
TGGGCCCCCACCCACTAGAAATGTAGCAAAAATTTCGTCCCTGCTGGGAA
AGGTACTTTAAAATTTCAGCCCCATCTATCCCTATTTGGATTTCGATGGA
GATTTTAATCCCTACTGGCGAAAGAAGTTCCAGCGGGCACTTTTATGTCC
ATGGGATATGTTTGCAATACCCCGTTGAAATTTCAGTACCCAGGCTAAAA
TTGCTTTCTTTTTATTTTCAAAGGATTGTAGCTTGCGAGTTTATCACACT
GACAATTTAAATCTTTCGAGATTATACTCCGGTGCTGACGAGCTTGATTT
GGAAGGGTGAGTCTCTAGTGAATCAACTTTCTTAGCAATGAAAGAAAGTT
GTTTGTCCTCTTCCATGATAACTAATTAGTCAGGCAGATGGCGTCACGTG
ATAAAGCGCAGTGGTTGCAAATTTTGCGGTTAAACTTGTACCTTAAAGGG
AAGTAATTTTCAGTTGAGAGGGTGTTTTGTTTACAATGGCCTATTTACCC
TGAAAAGAACAATTTTATAGGTGATTTTTTAAATCATGAGGATATTCGTG
TTTCACGAAATTTAATTTCGCGAATTTGTCGAAAAGCAACGAAATTTGAT
TCCGCGAAAATTTGTTCCCTTAAGGTTTGGCAGTTGCTTTGAATAGATAT
GAACTTTCTAATCCCCAAACCATCAACCAGACACATGATTTCTTTATTGG
ACACATCCGGAAACATTCCTTTTTTTGATGACTTCGCAAGCAAAACAAAA
GTTTTTTTGAAATAAAATATGGAAATACTTCAAACCAATCGACGTGGTTC
TTGACGTAGATTGATTTGAAAAATTGCTAAAAGTTATCATGGTTTTAAAT
TATGATAACGCTATAATTCCGCTGTTTTTAAATCGATTATCTTGAGTTAC
GTTGAAAAATCTTATGCTTTTTGACGTAGCTACAACGTTCGTAATAACTT
TACAAGGAAAATTCGTTCTCAGCGCACGGTATTGTTAGGCTGCCACTAAA
AAAATCGAACAAGCTCCTACCAAAACTATTTGCCACGAGAGACATTTTAG
GCCTCTGAAACTAGTTTTAACATTCGAATAGCTTAACTAAATAAACGTTA
AAAAATAGTATTGCAGTATAGTAGTATTATGCGATTGTTTTATCCTCGTG
GCTTAAAGTGTTAAAATATTTGAAATTTACAATTCTAGGTCAGGCCATGA
CTTATCCATCGCATCCGGCCATTCCAAAAAGATCTTTGTTATCAAATTTC
ATCCCGAAGATCGAAATGTATTCCTGTCTGCAAGCTGGGACCGAACTGTC
AAGGTAAGAGTTTTTGTGAAGAAATGAAGAGTCTGGACATAGTATTCCTT
GAAACATGTTTTTCTTCTATAGGCATAACATTTATAAGCATGTACAGGCC
AAGTTTTTTCACACCATAACAATTAACATGATGACATGACGATATTAGAC
GGACTATACATAAACTTGTCCCCTTGATTCTGGAAGACTTACTTAATTGG
ACATTTCATGCCCTCGTAACATTTTTGTACTTCATAAGATAGTTCACGAT
CTTTCTCCGTTTAGATCTGGGATTTGAGAACGGAGTACGCCGTGCGCACA
ATTAATGGTCCTTACGTATGCGGTGACGGTGTAGATCTTTTCCAAGGGAA
AATTGTTAGTGCGTCGTGGAAAGCCCAAGATGCCTTGCAGGTAAATTTTT
TATGTCATCCCTTATTGCTGAACCACCAGTACTCACGTTCTTAACTATTT
GTTAATTAACCACGTAGGTCTATATAGAAGTAGGTTTACAGGATGTTTTC
AGGGGAATCAGAATTTGCCTATTTTTCGACTCTTAATAGGACTGAGATTT
AATTTTTCTGATTTTTCAAACGCTTACAGGGACTGCCAGGTTTCAAAAAG
ATACCCTTAAGGGCGGCACATACACGTACCTTCACTTGCCTAAGTACCCC
CCCCCTGGATAATAGACCCTGTCTATTTCAAACCTTTTATTTGAATCCTA
ATTTAATTGTATTCATACTTTTAATTATCAGCTTTGGGATTACGGTAGTG
GTAAGCTGATTTCCACCTTGAGCTGGCCTACAACAAACAGACGTGGAGAG
TATTTGTATTGTGCAAGGTTTTGGGATAACAGCCATGTAGTGGCTGGTGG
AAGTGGAACGAACGATCTGAAAATGATTAATATCACTTCGAATGAGGTAA
TATTTTTTATCGAAAGAATATTTCTATATGTCCTTTGTTTACCAGGTGAT
CTCGAGAATTTCCAGGGTATTCAGTTGCTTATCCAATTTTGATACAGTGC
CTCTTCTAATTAGCGCTTTTTCTAAATTTTAACTTTTCGATAGATTGTTT
ACTCTTTCGCACTTGTAATAAGGAAGTTTGAAGCTATCGAAATGAGCATA
TATTTTAAGTATGAAAATCCGCAAAAACTATGAACTATGGTACATAGAAA
GTATATTGCTTTTAAATACTAAAAATCCTTATAATGAGTGAAGTTTTAAA
TTAAGATTCTGGATGATAGATAAAGAAATTATTCAATTCCTAATTTCACG
TTAAGTTTGACGAAAGCTTATTATCTTTTTTGCTGGAAAAAGTGATGAGA
CAAAAAACATATACAGTACATCGCATTTTTTGGCAAGATTTTCTAAAATT
AGTACTCGCAGCTCATAAGGTACTTTAAGGGCAGAAACTTTCGCCAGACC
GAAAAGTCGCGAAATTTCGTGGATCTAAGTTTCGCGATTTTTACTTTTTG
AAGAAAATTTACGGAAGAAACTTTCGCGGTTTTTGTGAATGTTCAATTCT
AGTAGCAATAACTTTCGCGAGTGGCTAGGGAAAGTGAATAAAAAATTATT
TCAAATCTCATTTTTTTTCTTCAATCGAAAGAGTGATATGCTAATAAATG
AAAGATAAACTATTTGCACTTCTTCCTCTCATTCCAAATCCTAGTCACTG
CGATAACATCGATAATATCGACTCTCCTCGGCTTTCAAAACTTGGAAAAA
ACTTTCGCGATTTTTAGGAAAATTTCATTTTTCGCGAAATTAACTTTCGC
GAATTTCTTGTTTAATTTCTTACCTGGCAGAAACTTTCGCGAAAAAATGC
CGAAAACGCGAAAAACGCGAAAGTTTCTGCCCTTAAAGTGAATAAAAACA
AAAATTATAATGATTTTTTTATTATCAGGTTGCAGGTGAAATTTCTGGTG
ATGGGCACCCAGTACAAGCAGTGGAAGTCTTGGAACAAAAGAACATGTTA
ATATGTGGTACAAGTGTAAATACGTTAAAAACAGCCATTATTACCGATGA
CGATGCAGAAGCTGACGTTCTATTGTATTGATTGGTGTCTGATATTCCCA
GTGCAATAATTTTTCCCCTTTTTAACTCTTTTTGGGAACAGGGGTCTAAC
TTCGAACGTTGATGGTGAAAAACCTTCCCCTCCAAAGAGTTCGCAGTTAC
GTGACAAAATAAATGTCCATCCAAGTGACTAAATTCTACCTTATTGGTAT
ATATTTTCGCGTGTTACAAATTTTCGCGAATCGCGAAATTTTTTGGAAAA
TACGTGTTTCGCGTGTATTAAATTTCGCGATTGCCGACTTCTGGAAAATT
TTCGCGTGTATTAAATTTCGCAATTCACTAAACTAGGTATTTTCAGAAAG
TGGGAATATAAAGCAAGAAAAAGACTGATTTTGCTTGAAACAC

Coding sequence (CDS) from alignment at sc0000391:13104..19146-

>TCONS_00021647 ID=TCONS_00021647|Name=TCONS_00021647|organism=Clytia hemisphaerica|type=CDS|length=10044bp|location=Sequence derived from alignment at sc0000391:13104..19146- (Clytia hemisphaerica)
GTTGCAGGTGAAATTTCTGGTGATGGGCACCCAGTACAAGCAGTGGAAGT
CTTGGAACAAAAGAACATGTTAATATGTGGTACAAGTGTAAATACGTTAA
AAACAGCCATTATTACCGATGACGATGCAGAAGCTGACGTTCTATTGTAT
TGACTTTGGGATTACGGTAGTGGTAAGCTGATTTCCACCTTGAGCTGGCC
TACAACAAACAGACGTGGAGAGTATTTGTATTGTGCAAGGTTTTGGGATA
ACAGCCATGTAGTGGCTGGTGGAAGTGGAACGAACGATCTGAAAATGATT
AATATCACTTCGAATGAGATCTGGGATTTGAGAACGGAGTACGCCGTGCG
CACAATTAATGGTCCTTACGTATGCGGTGACGGTGTAGATCTTTTCCAAG
GGAAAATTGTTAGTGCGTCGTGGAAAGCCCAAGATGCCTTGCAGGTCAGG
CCATGACTTATCCATCGCATCCGGCCATTCCAAAAAGATCTTTGTTATCA
AATTTCATCCCGAAGATCGAAATGTATTCCTGTCTGCAAGCTGGGACCGA
ACTGTCAAGGATTGTAGCTTGCGAGTTTATCACACTGACAATTTAAATCT
TTCGAGATTATACTCCGGTGCTGACGAGCTTGATTTGGAAGGGATCAGAT
GGTACGATCAAAGTGTTTAACCTGGACACGTTCTCACACGGTGAAAGAAC
AGTCACGGAGAAGAACAATCAAATCACTTCGTTGGATTTCAGTAATGATG
GACTTTATTTTGCCACAGGTGGAAAGCTTTACAACAGTCAAAATGAAGAG
TGGAAAAAGATTCGACGAGTGCGCACTGACCCAACCGTCAGTTTACCTCT
CCTAGCAATGAAATTCTATCCATGTAAAGCGCACAATGCTATATACACCG
GTGGTCATTGGAGATCAACCATCATAAAGATTACCACGTTGGCGACGAGA
ATGGTGTGTTTAGTATCGCACTCAATCATGATGGTAGACATGCTGCTATT
GGTCTTGGAAGTGGTAGTTTTGCTATGAGTACAGTGATACACAAACGTTT
GAAAGATGCTTTGGAGGTCGGCCATGTGTTGGAGAAAGATCAGAGAAGTC
AACAATACATGAGGAGGTTGCAGGTGAAATTTCTGGTGATGGGCACCCAG
TACAAGCAGTGGAAGTCTTGGAACAAAAGAACATGTTAATATGTGGTACA
AGTGTAAATACGTTAAAAACAGCCATTATTACCGATGACGATGCAGAAGC
TGACGTTCTATTGTATTGACTTTGGGATTACGGTAGTGGTAAGCTGATTT
CCACCTTGAGCTGGCCTACAACAAACAGACGTGGAGAGTATTTGTATTGT
GCAAGGTTTTGGGATAACAGCCATGTAGTGGCTGGTGGAAGTGGAACGAA
CGATCTGAAAATGATTAATATCACTTCGAATGAGATCTGGGATTTGAGAA
CGGAGTACGCCGTGCGCACAATTAATGGTCCTTACGTATGCGGTGACGGT
GTAGATCTTTTCCAAGGGAAAATTGTTAGTGCGTCGTGGAAAGCCCAAGA
TGCCTTGCAGGTCAGGCCATGACTTATCCATCGCATCCGGCCATTCCAAA
AAGATCTTTGTTATCAAATTTCATCCCGAAGATCGAAATGTATTCCTGTC
TGCAAGCTGGGACCGAACTGTCAAGGATTGTAGCTTGCGAGTTTATCACA
CTGACAATTTAAATCTTTCGAGATTATACTCCGGTGCTGACGAGCTTGAT
TTGGAAGGGATCAGATGGTACGATCAAAGTGTTTAACCTGGACACGTTCT
CACACGGTGAAAGAACAGTCACGGAGAAGAACAATCAAATCACTTCGTTG
GATTTCAGTAATGATGGACTTTATTTTGCCACAGGTGGAAAGCTTTACAA
CAGTCAAAATGAAGAGTGGAAAAAGATTCGACGAGTGCGCACTGACCCAA
CCGTCAGTTTACCTCTCCTAGCAATGAAATTCTATCCATGTAAAGCGCAC
AATGCTATATACACCGGTGGTCATTGGAGATCAACCATCATAAAGATTAC
CACGTTGGCGACGAGAATGGTGTGTTTAGTATCGCACTCAATCATGATGG
TAGACATGCTGCTATTGGTCTTGGAAGTGGTAGTTTTGCTATGAGTACAG
TGATACACAAACGTTTGAAAGATGCTTTGGAGGTCGGCCATGTGTTGGAG
AAAGATCAGAGAAGTCAACAATACATGAGGAGGTTGCAGGTGAAATTTCT
GGTGATGGGCACCCAGTACAAGCAGTGGAAGTCTTGGAACAAAAGAACAT
GTTAATATGTGGTACAAGTGTAAATACGTTAAAAACAGCCATTATTACCG
ATGACGATGCAGAAGCTGACGTTCTATTGTATTGACTTTGGGATTACGGT
AGTGGTAAGCTGATTTCCACCTTGAGCTGGCCTACAACAAACAGACGTGG
AGAGTATTTGTATTGTGCAAGGTTTTGGGATAACAGCCATGTAGTGGCTG
GTGGAAGTGGAACGAACGATCTGAAAATGATTAATATCACTTCGAATGAG
ATCTGGGATTTGAGAACGGAGTACGCCGTGCGCACAATTAATGGTCCTTA
CGTATGCGGTGACGGTGTAGATCTTTTCCAAGGGAAAATTGTTAGTGCGT
CGTGGAAAGCCCAAGATGCCTTGCAGGTCAGGCCATGACTTATCCATCGC
ATCCGGCCATTCCAAAAAGATCTTTGTTATCAAATTTCATCCCGAAGATC
GAAATGTATTCCTGTCTGCAAGCTGGGACCGAACTGTCAAGGATTGTAGC
TTGCGAGTTTATCACACTGACAATTTAAATCTTTCGAGATTATACTCCGG
TGCTGACGAGCTTGATTTGGAAGGGATCAGATGGTACGATCAAAGTGTTT
AACCTGGACACGTTCTCACACGGTGAAAGAACAGTCACGGAGAAGAACAA
TCAAATCACTTCGTTGGATTTCAGTAATGATGGACTTTATTTTGCCACAG
GTGGAAAGCTTTACAACAGTCAAAATGAAGAGTGGAAAAAGATTCGACGA
GTGCGCACTGACCCAACCGTCAGTTTACCTCTCCTAGCAATGAAATTCTA
TCCATGTAAAGCGCACAATGCTATATACACCGGTGGTCATTGGAGATCAA
CCATCATAAAGATTACCACGTTGGCGACGAGAATGGTGTGTTTAGTATCG
CACTCAATCATGATGGTAGACATGCTGCTATTGGTCTTGGAAGTGGTAGT
TTTGCTATGAGTACAGTGATACACAAACGTTTGAAAGATGCTTTGGAGGT
CGGCCATGTGTTGGAGAAAGATCAGAGAAGTCAACAATACATGAGGAGGT
TGCAGGTGAAATTTCTGGTGATGGGCACCCAGTACAAGCAGTGGAAGTCT
TGGAACAAAAGAACATGTTAATATGTGGTACAAGTGTAAATACGTTAAAA
ACAGCCATTATTACCGATGACGATGCAGAAGCTGACGTTCTATTGTATTG
ACTTTGGGATTACGGTAGTGGTAAGCTGATTTCCACCTTGAGCTGGCCTA
CAACAAACAGACGTGGAGAGTATTTGTATTGTGCAAGGTTTTGGGATAAC
AGCCATGTAGTGGCTGGTGGAAGTGGAACGAACGATCTGAAAATGATTAA
TATCACTTCGAATGAGATCTGGGATTTGAGAACGGAGTACGCCGTGCGCA
CAATTAATGGTCCTTACGTATGCGGTGACGGTGTAGATCTTTTCCAAGGG
AAAATTGTTAGTGCGTCGTGGAAAGCCCAAGATGCCTTGCAGGTCAGGCC
ATGACTTATCCATCGCATCCGGCCATTCCAAAAAGATCTTTGTTATCAAA
TTTCATCCCGAAGATCGAAATGTATTCCTGTCTGCAAGCTGGGACCGAAC
TGTCAAGGATTGTAGCTTGCGAGTTTATCACACTGACAATTTAAATCTTT
CGAGATTATACTCCGGTGCTGACGAGCTTGATTTGGAAGGGATCAGATGG
TACGATCAAAGTGTTTAACCTGGACACGTTCTCACACGGTGAAAGAACAG
TCACGGAGAAGAACAATCAAATCACTTCGTTGGATTTCAGTAATGATGGA
CTTTATTTTGCCACAGGTGGAAAGCTTTACAACAGTCAAAATGAAGAGTG
GAAAAAGATTCGACGAGTGCGCACTGACCCAACCGTCAGTTTACCTCTCC
TAGCAATGAAATTCTATCCATGTAAAGCGCACAATGCTATATACACCGGT
GGTCATTGGAGATCAACCATCATAAAGATTACCACGTTGGCGACGAGAAT
GGTGTGTTTAGTATCGCACTCAATCATGATGGTAGACATGCTGCTATTGG
TCTTGGAAGTGGTAGTTTTGCTATGAGTACAGTGATACACAAACGTTTGA
AAGATGCTTTGGAGGTCGGCCATGTGTTGGAGAAAGATCAGAGAAGTCAA
CAATACATGAGGAGGTTGCAGGTGAAATTTCTGGTGATGGGCACCCAGTA
CAAGCAGTGGAAGTCTTGGAACAAAAGAACATGTTAATATGTGGTACAAG
TGTAAATACGTTAAAAACAGCCATTATTACCGATGACGATGCAGAAGCTG
ACGTTCTATTGTATTGACTTTGGGATTACGGTAGTGGTAAGCTGATTTCC
ACCTTGAGCTGGCCTACAACAAACAGACGTGGAGAGTATTTGTATTGTGC
AAGGTTTTGGGATAACAGCCATGTAGTGGCTGGTGGAAGTGGAACGAACG
ATCTGAAAATGATTAATATCACTTCGAATGAGATCTGGGATTTGAGAACG
GAGTACGCCGTGCGCACAATTAATGGTCCTTACGTATGCGGTGACGGTGT
AGATCTTTTCCAAGGGAAAATTGTTAGTGCGTCGTGGAAAGCCCAAGATG
CCTTGCAGGTCAGGCCATGACTTATCCATCGCATCCGGCCATTCCAAAAA
GATCTTTGTTATCAAATTTCATCCCGAAGATCGAAATGTATTCCTGTCTG
CAAGCTGGGACCGAACTGTCAAGGATTGTAGCTTGCGAGTTTATCACACT
GACAATTTAAATCTTTCGAGATTATACTCCGGTGCTGACGAGCTTGATTT
GGAAGGGATCAGATGGTACGATCAAAGTGTTTAACCTGGACACGTTCTCA
CACGGTGAAAGAACAGTCACGGAGAAGAACAATCAAATCACTTCGTTGGA
TTTCAGTAATGATGGACTTTATTTTGCCACAGGTGGAAAGCTTTACAACA
GTCAAAATGAAGAGTGGAAAAAGATTCGACGAGTGCGCACTGACCCAACC
GTCAGTTTACCTCTCCTAGCAATGAAATTCTATCCATGTAAAGCGCACAA
TGCTATATACACCGGTGGTCATTGGAGATCAACCATCATAAAGATTACCA
CGTTGGCGACGAGAATGGTGTGTTTAGTATCGCACTCAATCATGATGGTA
GACATGCTGCTATTGGTCTTGGAAGTGGTAGTTTTGCTATGAGTACAGTG
ATACACAAACGTTTGAAAGATGCTTTGGAGGTCGGCCATGTGTTGGAGAA
AGATCAGAGAAGTCAACAATACATGAGGAGGTTGCAGGTGAAATTTCTGG
TGATGGGCACCCAGTACAAGCAGTGGAAGTCTTGGAACAAAAGAACATGT
TAATATGTGGTACAAGTGTAAATACGTTAAAAACAGCCATTATTACCGAT
GACGATGCAGAAGCTGACGTTCTATTGTATTGACTTTGGGATTACGGTAG
TGGTAAGCTGATTTCCACCTTGAGCTGGCCTACAACAAACAGACGTGGAG
AGTATTTGTATTGTGCAAGGTTTTGGGATAACAGCCATGTAGTGGCTGGT
GGAAGTGGAACGAACGATCTGAAAATGATTAATATCACTTCGAATGAGAT
CTGGGATTTGAGAACGGAGTACGCCGTGCGCACAATTAATGGTCCTTACG
TATGCGGTGACGGTGTAGATCTTTTCCAAGGGAAAATTGTTAGTGCGTCG
TGGAAAGCCCAAGATGCCTTGCAGGTCAGGCCATGACTTATCCATCGCAT
CCGGCCATTCCAAAAAGATCTTTGTTATCAAATTTCATCCCGAAGATCGA
AATGTATTCCTGTCTGCAAGCTGGGACCGAACTGTCAAGGATTGTAGCTT
GCGAGTTTATCACACTGACAATTTAAATCTTTCGAGATTATACTCCGGTG
CTGACGAGCTTGATTTGGAAGGGATCAGATGGTACGATCAAAGTGTTTAA
CCTGGACACGTTCTCACACGGTGAAAGAACAGTCACGGAGAAGAACAATC
AAATCACTTCGTTGGATTTCAGTAATGATGGACTTTATTTTGCCACAGGT
GGAAAGCTTTACAACAGTCAAAATGAAGAGTGGAAAAAGATTCGACGAGT
GCGCACTGACCCAACCGTCAGTTTACCTCTCCTAGCAATGAAATTCTATC
CATGTAAAGCGCACAATGCTATATACACCGGTGGTCATTGGAGATCAACC
ATCATAAAGATTACCACGTTGGCGACGAGAATGGTGTGTTTAGTATCGCA
CTCAATCATGATGGTAGACATGCTGCTATTGGTCTTGGAAGTGGTAGTTT
TGCTATGAGTACAGTGATACACAAACGTTTGAAAGATGCTTTGGAGGTCG
GCCATGTGTTGGAGAAAGATCAGAGAAGTCAACAATACATGAGGAGGTTG
CAGGTGAAATTTCTGGTGATGGGCACCCAGTACAAGCAGTGGAAGTCTTG
GAACAAAAGAACATGTTAATATGTGGTACAAGTGTAAATACGTTAAAAAC
AGCCATTATTACCGATGACGATGCAGAAGCTGACGTTCTATTGTATTGAC
TTTGGGATTACGGTAGTGGTAAGCTGATTTCCACCTTGAGCTGGCCTACA
ACAAACAGACGTGGAGAGTATTTGTATTGTGCAAGGTTTTGGGATAACAG
CCATGTAGTGGCTGGTGGAAGTGGAACGAACGATCTGAAAATGATTAATA
TCACTTCGAATGAGATCTGGGATTTGAGAACGGAGTACGCCGTGCGCACA
ATTAATGGTCCTTACGTATGCGGTGACGGTGTAGATCTTTTCCAAGGGAA
AATTGTTAGTGCGTCGTGGAAAGCCCAAGATGCCTTGCAGGTCAGGCCAT
GACTTATCCATCGCATCCGGCCATTCCAAAAAGATCTTTGTTATCAAATT
TCATCCCGAAGATCGAAATGTATTCCTGTCTGCAAGCTGGGACCGAACTG
TCAAGGATTGTAGCTTGCGAGTTTATCACACTGACAATTTAAATCTTTCG
AGATTATACTCCGGTGCTGACGAGCTTGATTTGGAAGGGATCAGATGGTA
CGATCAAAGTGTTTAACCTGGACACGTTCTCACACGGTGAAAGAACAGTC
ACGGAGAAGAACAATCAAATCACTTCGTTGGATTTCAGTAATGATGGACT
TTATTTTGCCACAGGTGGAAAGCTTTACAACAGTCAAAATGAAGAGTGGA
AAAAGATTCGACGAGTGCGCACTGACCCAACCGTCAGTTTACCTCTCCTA
GCAATGAAATTCTATCCATGTAAAGCGCACAATGCTATATACACCGGTGG
TCATTGGAGATCAACCATCATAAAGATTACCACGTTGGCGACGAGAATGG
TGTGTTTAGTATCGCACTCAATCATGATGGTAGACATGCTGCTATTGGTC
TTGGAAGTGGTAGTTTTGCTATGAGTACAGTGATACACAAACGTTTGAAA
GATGCTTTGGAGGTCGGCCATGTGTTGGAGAAAGATCAGAGAAGTCAACA
ATACATGAGGAGGTTGCAGGTGAAATTTCTGGTGATGGGCACCCAGTACA
AGCAGTGGAAGTCTTGGAACAAAAGAACATGTTAATATGTGGTACAAGTG
TAAATACGTTAAAAACAGCCATTATTACCGATGACGATGCAGAAGCTGAC
GTTCTATTGTATTGACTTTGGGATTACGGTAGTGGTAAGCTGATTTCCAC
CTTGAGCTGGCCTACAACAAACAGACGTGGAGAGTATTTGTATTGTGCAA
GGTTTTGGGATAACAGCCATGTAGTGGCTGGTGGAAGTGGAACGAACGAT
CTGAAAATGATTAATATCACTTCGAATGAGATCTGGGATTTGAGAACGGA
GTACGCCGTGCGCACAATTAATGGTCCTTACGTATGCGGTGACGGTGTAG
ATCTTTTCCAAGGGAAAATTGTTAGTGCGTCGTGGAAAGCCCAAGATGCC
TTGCAGGTCAGGCCATGACTTATCCATCGCATCCGGCCATTCCAAAAAGA
TCTTTGTTATCAAATTTCATCCCGAAGATCGAAATGTATTCCTGTCTGCA
AGCTGGGACCGAACTGTCAAGGATTGTAGCTTGCGAGTTTATCACACTGA
CAATTTAAATCTTTCGAGATTATACTCCGGTGCTGACGAGCTTGATTTGG
AAGGGATCAGATGGTACGATCAAAGTGTTTAACCTGGACACGTTCTCACA
CGGTGAAAGAACAGTCACGGAGAAGAACAATCAAATCACTTCGTTGGATT
TCAGTAATGATGGACTTTATTTTGCCACAGGTGGAAAGCTTTACAACAGT
CAAAATGAAGAGTGGAAAAAGATTCGACGAGTGCGCACTGACCCAACCGT
CAGTTTACCTCTCCTAGCAATGAAATTCTATCCATGTAAAGCGCACAATG
CTATATACACCGGTGGTCATTGGAGATCAACCATCATAAAGATTACCACG
TTGGCGACGAGAATGGTGTGTTTAGTATCGCACTCAATCATGATGGTAGA
CATGCTGCTATTGGTCTTGGAAGTGGTAGTTTTGCTATGAGTACAGTGAT
ACACAAACGTTTGAAAGATGCTTTGGAGGTCGGCCATGTGTTGGAGAAAG
ATCAGAGAAGTCAACAATACATGAGGAGGTTGCAGGTGAAATTTCTGGTG
ATGGGCACCCAGTACAAGCAGTGGAAGTCTTGGAACAAAAGAACATGTTA
ATATGTGGTACAAGTGTAAATACGTTAAAAACAGCCATTATTACCGATGA
CGATGCAGAAGCTGACGTTCTATTGTATTGACTTTGGGATTACGGTAGTG
GTAAGCTGATTTCCACCTTGAGCTGGCCTACAACAAACAGACGTGGAGAG
TATTTGTATTGTGCAAGGTTTTGGGATAACAGCCATGTAGTGGCTGGTGG
AAGTGGAACGAACGATCTGAAAATGATTAATATCACTTCGAATGAGATCT
GGGATTTGAGAACGGAGTACGCCGTGCGCACAATTAATGGTCCTTACGTA
TGCGGTGACGGTGTAGATCTTTTCCAAGGGAAAATTGTTAGTGCGTCGTG
GAAAGCCCAAGATGCCTTGCAGGTCAGGCCATGACTTATCCATCGCATCC
GGCCATTCCAAAAAGATCTTTGTTATCAAATTTCATCCCGAAGATCGAAA
TGTATTCCTGTCTGCAAGCTGGGACCGAACTGTCAAGGATTGTAGCTTGC
GAGTTTATCACACTGACAATTTAAATCTTTCGAGATTATACTCCGGTGCT
GACGAGCTTGATTTGGAAGGGATCAGATGGTACGATCAAAGTGTTTAACC
TGGACACGTTCTCACACGGTGAAAGAACAGTCACGGAGAAGAACAATCAA
ATCACTTCGTTGGATTTCAGTAATGATGGACTTTATTTTGCCACAGGTGG
AAAGCTTTACAACAGTCAAAATGAAGAGTGGAAAAAGATTCGACGAGTGC
GCACTGACCCAACCGTCAGTTTACCTCTCCTAGCAATGAAATTCTATCCA
TGTAAAGCGCACAATGCTATATACACCGGTGGTCATTGGAGATCAACCAT
CATAAAGATTACCACGTTGGCGACGAGAATGGTGTGTTTAGTATCGCACT
CAATCATGATGGTAGACATGCTGCTATTGGTCTTGGAAGTGGTAGTTTTG
CTATGAGTACAGTGATACACAAACGTTTGAAAGATGCTTTGGAGGTCGGC
CATGTGTTGGAGAAAGATCAGAGAAGTCAACAATACATGAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012139XLOC_012139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021647-exon-sc0000391-1575043694:19028..19146TCONS_00021647-exon-sc0000391-1575043694:19028..19146Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:18150..18270TCONS_00021647-exon-sc0000391-1575043694:18150..18270Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:17418..17544TCONS_00021647-exon-sc0000391-1575043694:17418..17544Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:16853..16986TCONS_00021647-exon-sc0000391-1575043694:16853..16986Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:16491..16573TCONS_00021647-exon-sc0000391-1575043694:16491..16573Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:15494..15608TCONS_00021647-exon-sc0000391-1575043694:15494..15608Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:15107..15232TCONS_00021647-exon-sc0000391-1575043694:15107..15232Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:14601..14765TCONS_00021647-exon-sc0000391-1575043694:14601..14765Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1575043694:13104..13618TCONS_00021647-exon-sc0000391-1575043694:13104..13618Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:19028..19146TCONS_00021647-exon-sc0000391-1510915933:19028..19146Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:18150..18270TCONS_00021647-exon-sc0000391-1510915933:18150..18270Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:17418..17544TCONS_00021647-exon-sc0000391-1510915933:17418..17544Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:16853..16986TCONS_00021647-exon-sc0000391-1510915933:16853..16986Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:16491..16573TCONS_00021647-exon-sc0000391-1510915933:16491..16573Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:15494..15608TCONS_00021647-exon-sc0000391-1510915933:15494..15608Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:15107..15232TCONS_00021647-exon-sc0000391-1510915933:15107..15232Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:14601..14765TCONS_00021647-exon-sc0000391-1510915933:14601..14765Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1510915933:13104..13618TCONS_00021647-exon-sc0000391-1510915933:13104..13618Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:19028..19146TCONS_00021647-exon-sc0000391-1491911889:19028..19146Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:18150..18270TCONS_00021647-exon-sc0000391-1491911889:18150..18270Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:17418..17544TCONS_00021647-exon-sc0000391-1491911889:17418..17544Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:16853..16986TCONS_00021647-exon-sc0000391-1491911889:16853..16986Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:16491..16573TCONS_00021647-exon-sc0000391-1491911889:16491..16573Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:15494..15608TCONS_00021647-exon-sc0000391-1491911889:15494..15608Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:15107..15232TCONS_00021647-exon-sc0000391-1491911889:15107..15232Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:14601..14765TCONS_00021647-exon-sc0000391-1491911889:14601..14765Clytia hemisphaericaexon
TCONS_00021647-exon-sc0000391-1491911889:13104..13618TCONS_00021647-exon-sc0000391-1491911889:13104..13618Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021647-proteinTCONS_00021647-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000391supercontigsc0000391:13104..19146 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.5611	16.6363	12.9418	8.97413	11.8706	8.47997	11.4407	11.2038	25.0948	25.919	31.0201	21.3082	2.03823	1.44255	1.05298	1.08448	1.69471	2.41378	1.79822	1.88938	2.57293	2.35041	8.94314	8.79664	41.258	31.0456	1.70849	1.77774	5.58595	6.62372
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021647 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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