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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021348 ID=TCONS_00021348|Name=TCONS_00021348|organism=Clytia hemisphaerica|type=transcript|length=877bp
GACTATAGATAAAAACAAATATACAAGCATTATTGGATATCCAACGCAAC
AGAAGTATTCATGTTCACCGCAAATATTTTATAAGTATGGTACATGGTTG
ACTGGTGCTGACCGTGGCTTTGACAGCTTATTTCTCAAagGCTTCACGCG
GACAAATTTTTGGTATACCAGAGAACAATCACGGTGTGGAGCCTGATGTC
CTTATTGACCGAGAGACGAAACCATCCCCTGGTTACCTCATTAAAACCAT
TCCGCGAATGTCAACCGAATACAAAGTTTCAACGAAATTCATCATCCATA
GCTTACCGGTCAAAACTACGGCTTGTTTATTCCGCTTCAAGGGTGATCCC
TTCGAAAATGGCTACGCTGCGCGTAACCCGAAAATATTCGTTACACCACA
GCCTGCTGTGACAGTCACATCAGCAGTAAATGGAGCGAATTAagcttgaa
aatcgaattagggGAACTGGCTCTTGGACATTATCACGCAGTCGTTATCG
AGCAGCGGTATGTCAGGAACGGTCTATATAGATACAGAATTCTCTTGAAT
GGAGTTGAAAAGTATTCAGTGATAAACAAGGACGCCAGACAGTTCTATAA
TGTCCAGTGTTTTGCTTCAATACAAAGTGAAATGATTGCACCTGCCAATG
CAACAATCAAGTATTCAAGTTTGACTAATTTCTTGTAGATatttaaaagt
ttcgaaaatgtGCCAAAAACTGACAGTTTTTTCACTCCCAATTTAGCTGT
TCTTAATTTACGAACCAGGGGCTGTGTACTCCATGTTGAGTCATCGTTGT
CATGGGTTGGCCCCGCCCTTACACAAGTTGATCAAACGAAAGAGGGACGA
GTTTTAGTACTTGGACACTGAAGTGCA Run BLAST on NCBI transcript from alignment at sc0000385:785..2158- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021348 ID=TCONS_00021348|Name=TCONS_00021348|organism=Clytia hemisphaerica|type=transcript|length=1374bp|location=Sequence derived from alignment at sc0000385:785..2158- (Clytia hemisphaerica)
GACTATAGATAAAAACAAATATACAAGCATTATTGGATATCCAACGCAAC
AGAAGTATTCATGTTCACCGCAAATATTTTATAAGTATGGTACATGGTTG
ACTGGTGCTGACCGTGGCTTTGACAGCTTATTTCTCAAAGGTATACTTCA
ATAATGTAAGATTTCAAAACAACACTCCCTATGATTTTGAATTTATCATG
GCATTCATTTCTCGTTTTTTGGCTGGAACTTTCCCCCACAATTTCCATTT
AGCCGCTCAAAATTTTTACAATTTTGAACCGACCAGCCACAGCTTTGTTA
ATATCATAAGCAGTTCTACTTCAACTCATTGAGAGATTGTAATTTATTTT
TCAGGCTTCACGCGGACAAATTTTTGGTATACCAGAGAACAATCACGGTG
TGGAGCCTGATGTCCTTATTGACCGAGGTATCTATATTTTGGTCCCTTTG
TCCCTTTGGTCGGACATTCAAATTTGTGTTTAAAAAACCAAATGTAACGT
GTTTTCTAACAGGATAGTCAAAAAGAAAATACAGCGGAGTGGTCTGCTAT
AATGCACATTTCAGCTTCTTATTCCCGCTAGAATTTGACTTTTTTTGTCA
CAAAATAAACTTGTCAGCTGTTTCGTGAACCTTAATATTGTATAAGATAC
CACTTGCCTACATTTTGAACAACACCTTCTTCACAAAAAATTTGCCATTT
ATTTTTTAAGAGACGAAACCATCCCCTGGTTACCTCATTAAAACCATTCC
GCGAATGTCAACCGAATACAAAGTTTCAACGAAATTCATCATCCATAGCT
TACCGGTCAAAACTACGGCTTGTTTATTCCGCTTCAAGGGTGATCCCTTC
GAAAATGGCTACGCTGCGCGTAACCCGAAAATATTCGTTACACCACAGCC
TGCTGTGACAGTCACATCAGCAGTAAATGGAGCGAATTAAGCTTGAAAAT
CGAATTAGGGGAACTGGCTCTTGGACATTATCACGCAGTCGTTATCGAGC
AGCGGTATGTCAGGAACGGTCTATATAGATACAGAATTCTCTTGAATGGA
GTTGAAAAGTATTCAGTGATAAACAAGGACGCCAGACAGTTCTATAATGT
CCAGTGTTTTGCTTCAATACAAAGTGAAATGATTGCACCTGCCAATGCAA
CAATCAAGTATTCAAGTTTGACTAATTTCTTGTAGATATTTAAAAGTTTC
GAAAATGTGCCAAAAACTGACAGTTTTTTCACTCCCAATTTAGCTGTTCT
TAATTTACGAACCAGGGGCTGTGTACTCCATGTTGAGTCATCGTTGTCAT
GGGTTGGCCCCGCCCTTACACAAGTTGATCAAACGAAAGAGGGACGAGTT
TTAGTACTTGGACACTGAAGTGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021348-exon-sc0000385-1575043694:2019..2158 | TCONS_00021348-exon-sc0000385-1575043694:2019..2158 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1575043694:1732..1804 | TCONS_00021348-exon-sc0000385-1575043694:1732..1804 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1575043694:785..1448 | TCONS_00021348-exon-sc0000385-1575043694:785..1448 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1510915933:2019..2158 | TCONS_00021348-exon-sc0000385-1510915933:2019..2158 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1510915933:1732..1804 | TCONS_00021348-exon-sc0000385-1510915933:1732..1804 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1510915933:785..1448 | TCONS_00021348-exon-sc0000385-1510915933:785..1448 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1491911889:2019..2158 | TCONS_00021348-exon-sc0000385-1491911889:2019..2158 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1491911889:1732..1804 | TCONS_00021348-exon-sc0000385-1491911889:1732..1804 | Clytia hemisphaerica | exon |
| TCONS_00021348-exon-sc0000385-1491911889:785..1448 | TCONS_00021348-exon-sc0000385-1491911889:785..1448 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000385 | supercontig | sc0000385:785..2158 - |
Blast
The following BLAST results are available for this feature:
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