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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021309 ID=TCONS_00021309|Name=TCONS_00021309|organism=Clytia hemisphaerica|type=transcript|length=357bp
TATGGCTGAAGGGaaagttttcaaagttttgataggATTTGCGATTCCTG
TCATTATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAATGGTTCA
GAACAAAAGACGCAATTAACATCAACGATCGTAGACGCAGGAGGAAGCGG
AACACGTTTAATTGTTTATCAATATACAGATACTCTTGAAGAACACAAAG
TGGAATGCGAAGGTATTGGACTCGGTAATTGGAAAGAAGAAGATTACCCA
GAACTTGAACGACAACTAAATGAATGTTATAAGAAAGGTCACCAATATTT
ACCTGATGGTTCTACCAACACACCAATATGGTTCGGTGCCACTGCTGGTA
TGCGTCT Run BLAST on NCBI protein sequence of TCONS_00021309-protein >TCONS_00021309-protein ID=TCONS_00021309-protein|Name=TCONS_00021309-protein|organism=Clytia hemisphaerica|type=polypeptide|length=118bp
MAEGKVFKVLIGFAIPVIIIGIVLVIVGYRNGSEQKTQLTSTIVDAGGSG
TRLIVYQYTDTLEEHKVECEGIGLGNWKEEDYPELERQLNECYKKGHQYL
PDGSTNTPIWFGATAGMR Run BLAST on NCBI transcript from alignment at sc0000382:150733..153627- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021309 ID=TCONS_00021309|Name=TCONS_00021309|organism=Clytia hemisphaerica|type=transcript|length=2895bp|location=Sequence derived from alignment at sc0000382:150733..153627- (Clytia hemisphaerica)
TATGGCTGAAGGGAAAGTTTTCAAAGTTTTGATAGGATTTGCGATTCCTG
TCATTATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAATGGTTCA
GAACAAAAGGTATTATAAAATAATTCTCTACGTCGCCTGGGGTCCACTTA
AGGTTTTTTTGATAGACTGGCTGACGCGATCAAGTGATTGTATTACCAGC
TATTAAGTTTTTGATTTTTTTCGCGTTGGTGTAATGCAACATGCTCCATC
TCACCAACCTGAAACCTTGTGTCTCCACCCCATTTTTCTTTCTACCTATA
AAAGTGAAATCTAACTTTTGTCCCTGGAACAATGGAGTAAAATTGATTCG
AGTCAATTTTGTTCCATTGTCCCAGGGACAAAATCAGCATGTCTTTTGTC
TTTTTGTCCCATTAAAAAAAAAAGAAACCATGGTCACACACACTTTTTTC
TTGTGTTGGTGGGATGGAGTAATGGACGCATTGCACCAACGCGAAAAAAA
CTTCTCGTGTCCTAACTTAGCCTCGCTTTCATGTTAAATGTTCCTGGTTT
TGGTATTGCACAATTGATATCGGGAAAGGTAACAGCCCATTCGGGTTTTT
TTAAGGGTATGGATCTTTCCGTGGGATTATACCAATATTTTTCTAGTTTA
TCTTTTTCCCGGTTGTCTAACTTTTCACGGAGCTTAAACTTGGGCTATTT
TTGAGAATTTTCCCACCGAAGCCGATTTGACAATTTTTCCAGGGTAATGA
TACAGGGGTGTTTCAATAAACTGATGTAATAAAAATGACAACTTACAGCG
AATATTTCGTGTTATTAAAAGAGAGCTTCTTAAAAACACCCGGCAAAATC
TTTACAAGTTTTAAAGGCTTGGGAAGAGGAAAATTAGGGTCAGACCCAAT
CGTTGGCTTGAGATCAAATTCGAACATCAGAGTTTTCAAGTCAGACTATT
AGAGTGGCTTATTCAGTATAGGTTTAAGCGGGCTGGAGAGAGGATTTTTG
ATTGCCATACACGTTAGGAATTCGTTCAGATTAAAAAGAAAGTATCATTT
CAAAGTTTTTGGCTATGCCACGTAACGTAACTCTTTTCAAAAACAAATGC
GCCTAAACGGAAATGGAGCGTCAATCTTATCTCTCATTGTTTTAGACAAA
ATTCTAATTTGTCTAAATTCAAATTTAGACTTTTTTTCTATTCTGCGGTA
AACCTTTATCTGTCTGCCTAATTAAAAGTCTATTTCGCTCTTTTATGTTC
CCCTTTCTTTAATTGCTTTTTGATTCGAATGAAATCTAATTGGAATCTTC
AAATTGTCTATGAGCCCCCCCCCCCTTCAATCCACGCAATCAAGCATTTT
TTATTTAATTTCCACGCATTCACGCAAGTGAAAAAGCTCATTCACGCATT
CACACGAGCCCCTGGGGGGGGGCTGTCTATTTTTTGCTCCATTGTTTGAA
GGCTGCTATGAGACTTTTTCCACATACGTTTGGGGGAAATATCTCAAATT
TGATTTCTCATCTGACTATCGAACACTCTTACACTGTTGTATGTTTCATG
TGTTCCCAGCTGAATGTTAAGGCCGAAACGAAATGAAGCCATTCTATTGG
TGACATTAAAGTGTTACGCCACACTTTTAACCAATAGAATAGCTTGATTC
TGCTTCGGAGCGAAACAGAACCATAACGCGCGAACATGGTCTTACTTTTT
GAATTAGAGGGAGTTGACTGTAGGACACTATTTTATATTTGCTTTATCTG
TTTCAGACGCAATTAACATCAACGATCGTAGACGCAGGAGGAAGCGGAAC
ACGTTTAATTGTTTATCAATATACAGATACTCTTGAAGAACACAAAGTGG
AATGCGAAGGTTAGTTTTACTTTATCACTGTGTGGCTCCGAGGTTGCCCA
GCTGGCATACGACGTTGTTTCAACGTTCATCTAACGTTATATCGACGTTG
TGAACGTTAGATAAACGTCAAAAAAACGTTGTGTGCCAGCTGGGTGATTC
CGAGAGCATCTTTATCCTTTTTTCTCTCGCTAAGTTATCCGGGACAGGGA
AGTTGTTGAGTATGCGAGCCAAGACAGTTTCTTTTTCACGCCCTTGAAAT
CTCTTCAAAAGCTTATAAATTAAAAAGCTATTTAGGCAATATATGGGTTT
CCAAAAATCTAAAGAAGTCATAAATTCTTGAAATTTCAATCAGAGTTTAA
TGATTTTTACATTTTAAATCTCTCAAATCGTCTCAAATTTAAAATTTTTT
CTTAATATTGGCCCAAAATTTGAAAATCTCTGGCAGCAATTGTGATTCAC
TAAATCACTTACCAGTAATAGACCTTTATTACTCTTTTTACGGTAAGAAA
TTTTGAAATTTATCACAAATTTATCATTTTTATGAGCGCGAACTATATAA
CAACACGAAGCTTCGGTGGCCGAAATCTTAAGAATAAGTTAAAAACATTC
TTTTCTAAGGCTTTTTGGACTCTAAAATACCTGATTTTTTAGAAGAATGG
ACAAAAATACTCCAAATGGTGAATATAAAAACATGTTTAGAACATTTTAG
GCTTAATATCCAAAAAACTAAGAGTATCTGAAGGCTTCAAAAATTTTGGA
TGTTCTTATAACAAAAACGTGTACAGAGAAGTCCCCTATCTCTGCACACA
GCGTTGTTTCAACGTTCATTTAACGTTCTATGGACGTTATGGACGTTAGA
TGAACGTTGAAACAACGTTATGTGTCAGCTGGGATATTTGTATTTTACAG
GTATTGGACTCGGTAATTGGAAAGAAGAAGATTACCCAGAACTTGAACGA
CAACTAAATGAATGTTATAAGAAAGGTCACCAATATTTACCTGATGGTTC
TACCAACACACCAATATGGTTCGGTGCCACTGCTGGTATGCGTCT Coding sequence (CDS) from alignment at sc0000382:150733..153627- >TCONS_00021309 ID=TCONS_00021309|Name=TCONS_00021309|organism=Clytia hemisphaerica|type=CDS|length=1062bp|location=Sequence derived from alignment at sc0000382:150733..153627- (Clytia hemisphaerica)
GTATTGGACTCGGTAATTGGAAAGAAGAAGATTACCCAGAACTTGAACGA
CAACTAAATGAATGTTATAAGAAAGGTCACCAATATTTACCTGATGGTTC
TACCAACACACCAATATGGTTCGGTGCCACTGCTGGTATGCGTACGCAAT
TAACATCAACGATCGTAGACGCAGGAGGAAGCGGAACACGTTTAATTGTT
TATCAATATACAGATACTCTTGAAGAACACAAAGTGGAATGCGAAGATGG
CTGAAGGGAAAGTTTTCAAAGTTTTGATAGGATTTGCGATTCCTGTCATT
ATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAATGGTTCAGAACA
AAAGGTATTGGACTCGGTAATTGGAAAGAAGAAGATTACCCAGAACTTGA
ACGACAACTAAATGAATGTTATAAGAAAGGTCACCAATATTTACCTGATG
GTTCTACCAACACACCAATATGGTTCGGTGCCACTGCTGGTATGCGTACG
CAATTAACATCAACGATCGTAGACGCAGGAGGAAGCGGAACACGTTTAAT
TGTTTATCAATATACAGATACTCTTGAAGAACACAAAGTGGAATGCGAAG
ATGGCTGAAGGGAAAGTTTTCAAAGTTTTGATAGGATTTGCGATTCCTGT
CATTATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAATGGTTCAG
AACAAAAGGTATTGGACTCGGTAATTGGAAAGAAGAAGATTACCCAGAAC
TTGAACGACAACTAAATGAATGTTATAAGAAAGGTCACCAATATTTACCT
GATGGTTCTACCAACACACCAATATGGTTCGGTGCCACTGCTGGTATGCG
TACGCAATTAACATCAACGATCGTAGACGCAGGAGGAAGCGGAACACGTT
TAATTGTTTATCAATATACAGATACTCTTGAAGAACACAAAGTGGAATGC
GAAGATGGCTGAAGGGAAAGTTTTCAAAGTTTTGATAGGATTTGCGATTC
CTGTCATTATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAATGGT
TCAGAACAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021309-exon-sc0000382-1575043694:153519..153627 | TCONS_00021309-exon-sc0000382-1575043694:153519..153627 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1575043694:151769..151871 | TCONS_00021309-exon-sc0000382-1575043694:151769..151871 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1575043694:150733..150877 | TCONS_00021309-exon-sc0000382-1575043694:150733..150877 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1510915933:153519..153627 | TCONS_00021309-exon-sc0000382-1510915933:153519..153627 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1510915933:151769..151871 | TCONS_00021309-exon-sc0000382-1510915933:151769..151871 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1510915933:150733..150877 | TCONS_00021309-exon-sc0000382-1510915933:150733..150877 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1491911889:153519..153627 | TCONS_00021309-exon-sc0000382-1491911889:153519..153627 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1491911889:151769..151871 | TCONS_00021309-exon-sc0000382-1491911889:151769..151871 | Clytia hemisphaerica | exon |
| TCONS_00021309-exon-sc0000382-1491911889:150733..150877 | TCONS_00021309-exon-sc0000382-1491911889:150733..150877 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000382 | supercontig | sc0000382:150733..153627 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000407 | GDA1_CD39_NTPase |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0016787 |
hydrolase activity |
Blast
The following BLAST results are available for this feature:
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